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Identifier: 11499178

GI number: 11499178

Start: 1422224

End: 1423396

Strand: Reverse

Name: Not Available

Synonym: AF1583

Alternate gene names: NA

Gene position: 1423396-1422224 (Counterclockwise)

Preceding gene: 11499179

Following gene: 11499177

Centisome position: 65.34

GC content: 40.66

Gene sequence:

>1173_bases
GTGAAGATAGTTGAAACAAGAGCTAAGTCCATAATAAGCAGGATGAGAGACGGATTCTTTTCCATGAGGTATCTGCCGTT
CAGATTGACTGCAAACATTTATCGTGGCTGCTCTCATGGTTGCGTGTACTGCTATGCTGCCTGCACTCACTACTACATGC
GTTCGAGTCCAAACCTTTTTTCAAAGGAGATTTATGTGAAAAAGAATGCTCCTGAGATTTTCGAGAAGGAGATAGCTAAG
TATGAGCAAAGAAAAAGGAAGAGCGTTATTGTAATTGGTAACATTTCAGACACGTATCAGCCAGTTGAGACGAATTACAG
ATTAACCAGAAAATTGCTTGAAATATGTTACAAGCACGACTTTCCGTGTTTTATAGAAACAAAATCGCCCTTAATACTGA
ATGATATAGATATTATTGAGAAATTGGCTGAAAGAGAGCTTATAGGAGTTGGCATGACAGTCACCTCCTACGATAATGAG
TTTACGAGACTCGTGGAGCCACTTGTTCCAAGAAGCAAGTTTGTGCGTTCCCCGATTAGGCAGAAAGAAAGAATTCTTAC
GTTGCAGAGGCTGTCTGAAATTGGAGTTGATACCTACCTCCACATAACTCCTTACTTTCCCTTCGTAACAGATGAAGACG
TAGAGAGAATAATAAGGGACGCTGCTGAAGCAGGAGTTGGAAATGTAATAATGGCGCCCCTTGAGATATCTGGATTTATA
TGGAACAGACTCAAAAAGGTGTTTAAATCAAGCGAAAGGTATTCCTCTCTGATACCCCTATACGAAAAGAGGTATTTTGA
AAGTGGACGAAAGCTTGGAGCAAGAATAACCACATCTGAAAAAGAGCACTATAAACTGGAGAAAAAAGTCTCTGAGCTGT
GTAAAAAATATGGTATAGGTTACTGGGCATTCAACAATCCGCAGTTCAATACGGCGGTGATATCAGGTGCCTACAGGCTG
CGATATCCTATTTTGCTTGACTACTGGAAACTTACACACGAAAAAGGCAGATTGAGGCTTAAAGACGCTTTGCAATTCGC
CATGAACTTCCCTGTTGACAAAAAATACCTGTCAGCATTGCAGGAGTATTTTCTGAATGGAGAACTTTTCAAGGGCGTGT
ATGGCGTGAGAAAAATAGTTGAAAATTGTGAAGTTGTCTATGTTCCCGCTTAG

Upstream 100 bases:

>100_bases
TTTATGCTTTTCCTGAGGGGAGTTGTATGAGCGGTTAGCTGACGATAGCGGACCATTAGAATTATGTTCTGCGATTACAT
AAACATCTAAGAGTGGTAGC

Downstream 100 bases:

>100_bases
TGAAAAAATGGGCTCTGGTTAGTCGTGGGGATATGGAGCTTTGTTCAAAGCATAGTTTTAATGTGTCCTGTATCAACAGC
AATCATGGTTCGGAAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKIVETRAKSIISRMRDGFFSMRYLPFRLTANIYRGCSHGCVYCYAACTHYYMRSSPNLFSKEIYVKKNAPEIFEKEIAK
YEQRKRKSVIVIGNISDTYQPVETNYRLTRKLLEICYKHDFPCFIETKSPLILNDIDIIEKLAERELIGVGMTVTSYDNE
FTRLVEPLVPRSKFVRSPIRQKERILTLQRLSEIGVDTYLHITPYFPFVTDEDVERIIRDAAEAGVGNVIMAPLEISGFI
WNRLKKVFKSSERYSSLIPLYEKRYFESGRKLGARITTSEKEHYKLEKKVSELCKKYGIGYWAFNNPQFNTAVISGAYRL
RYPILLDYWKLTHEKGRLRLKDALQFAMNFPVDKKYLSALQEYFLNGELFKGVYGVRKIVENCEVVYVPA

Sequences:

>Translated_390_residues
MKIVETRAKSIISRMRDGFFSMRYLPFRLTANIYRGCSHGCVYCYAACTHYYMRSSPNLFSKEIYVKKNAPEIFEKEIAK
YEQRKRKSVIVIGNISDTYQPVETNYRLTRKLLEICYKHDFPCFIETKSPLILNDIDIIEKLAERELIGVGMTVTSYDNE
FTRLVEPLVPRSKFVRSPIRQKERILTLQRLSEIGVDTYLHITPYFPFVTDEDVERIIRDAAEAGVGNVIMAPLEISGFI
WNRLKKVFKSSERYSSLIPLYEKRYFESGRKLGARITTSEKEHYKLEKKVSELCKKYGIGYWAFNNPQFNTAVISGAYRL
RYPILLDYWKLTHEKGRLRLKDALQFAMNFPVDKKYLSALQEYFLNGELFKGVYGVRKIVENCEVVYVPA
>Mature_390_residues
MKIVETRAKSIISRMRDGFFSMRYLPFRLTANIYRGCSHGCVYCYAACTHYYMRSSPNLFSKEIYVKKNAPEIFEKEIAK
YEQRKRKSVIVIGNISDTYQPVETNYRLTRKLLEICYKHDFPCFIETKSPLILNDIDIIEKLAERELIGVGMTVTSYDNE
FTRLVEPLVPRSKFVRSPIRQKERILTLQRLSEIGVDTYLHITPYFPFVTDEDVERIIRDAAEAGVGNVIMAPLEISGFI
WNRLKKVFKSSERYSSLIPLYEKRYFESGRKLGARITTSEKEHYKLEKKVSELCKKYGIGYWAFNNPQFNTAVISGAYRL
RYPILLDYWKLTHEKGRLRLKDALQFAMNFPVDKKYLSALQEYFLNGELFKGVYGVRKIVENCEVVYVPA

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45686; Mature: 45686

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVETRAKSIISRMRDGFFSMRYLPFRLTANIYRGCSHGCVYCYAACTHYYMRSSPNLF
CCCHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
SKEIYVKKNAPEIFEKEIAKYEQRKRKSVIVIGNISDTYQPVETNYRLTRKLLEICYKHD
CCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
FPCFIETKSPLILNDIDIIEKLAERELIGVGMTVTSYDNEFTRLVEPLVPRSKFVRSPIR
CCEEEECCCCEEECHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHHCHHH
QKERILTLQRLSEIGVDTYLHITPYFPFVTDEDVERIIRDAAEAGVGNVIMAPLEISGFI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
WNRLKKVFKSSERYSSLIPLYEKRYFESGRKLGARITTSEKEHYKLEKKVSELCKKYGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCC
YWAFNNPQFNTAVISGAYRLRYPILLDYWKLTHEKGRLRLKDALQFAMNFPVDKKYLSAL
EEEECCCCCCHHHHHCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
QEYFLNGELFKGVYGVRKIVENCEVVYVPA
HHHHCCCHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MKIVETRAKSIISRMRDGFFSMRYLPFRLTANIYRGCSHGCVYCYAACTHYYMRSSPNLF
CCCHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
SKEIYVKKNAPEIFEKEIAKYEQRKRKSVIVIGNISDTYQPVETNYRLTRKLLEICYKHD
CCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
FPCFIETKSPLILNDIDIIEKLAERELIGVGMTVTSYDNEFTRLVEPLVPRSKFVRSPIR
CCEEEECCCCEEECHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHHCHHH
QKERILTLQRLSEIGVDTYLHITPYFPFVTDEDVERIIRDAAEAGVGNVIMAPLEISGFI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
WNRLKKVFKSSERYSSLIPLYEKRYFESGRKLGARITTSEKEHYKLEKKVSELCKKYGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCC
YWAFNNPQFNTAVISGAYRLRYPILLDYWKLTHEKGRLRLKDALQFAMNFPVDKKYLSAL
EEEECCCCCCHHHHHCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
QEYFLNGELFKGVYGVRKIVENCEVVYVPA
HHHHCCCHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]