| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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Identifier: 11499103
GI number: 11499103
Start: 1361209
End: 1362651
Strand: Reverse
Name: Not Available
Synonym: AF1508
Alternate gene names: NA
Gene position: 1362651-1361209 (Counterclockwise)
Preceding gene: 11499104
Following gene: 11499102
Centisome position: 62.55
GC content: 49.9
Gene sequence:
>1443_bases ATGGGTGGTGCATTCGCTCAGGGCGGAAGTGCGATGACGCCCGACATGTTCATACATATTGGCCCCTTTGAGGCACTCTT TCTCTTAGCTCTCGGCTTCTTTGGCGGGATGCTGAGCGGTTTTATCGGAACTGGAGGAGCTTTCGTTTTAACTCCGGGGA TGATGTCCATCGGCACTCCCGGGCCCATTGCTGTTGCATCCAACATGTGCCACAAGTTCCCCAAGGCGATGATTGGTGCT TACAGAAGGTATAAGCTGAGGCAGCTCGACCCGAAGCTCGCTCTTTTAATGGCCACCTCTGCTATTTTTGGCGTTCAGGT TGGTATTCAGGTTCAAAAGCACATTTATGAGCTTTTAGGACCTACTGGAACGAATCTTTACGTAAGTGTTGCTTTCCTAA TTGTTTTACCAACTGTTGCGGCAGTTCTAATAAGGGATGTCGTGAAAGCGAGGAGGATGGGAATTTCTGACCTCGAACCT CGCTTTGCAGCCAAGCTGGAGCAGAAGTTCAGAATCCCACCAGTGATTAAGTTCAACATCGTCGGGAGGGAGCAGTCTGC GTGGCTAACCATCCCTCTCGGCTTTGGAACGGGATTTCTTGCTGCAACCATTGCTGTTGGAGGATTTATTGGAGTGCCTT CGATGATTTACCTCATTGGCGCTTCGAGTGCTGTTGCCAGTGGAACTGAGCTGGGTATAGCCTTTGTGATGGGCTCAACT GGAACATTCACGTGGATTTACTTACTCGGAGCGGTGGATTTGAGACTGACAACGCTGATTCTTGCAACGTCTCTCATTGG TGTGCAGATTGGGGCTGTTGGAACAACCTACGTGAGACAGTACTACATTAAGATGGCGATGGCGACCGTGATGCTGCTCG TAACGCTCAGCAGGGCTCTGGCTGTTCCGGGCTATCTGGTTGAGCTGGGTTGGGTGGAGCTGGATGAGAGTGTTGTCAAT CTGTTAAACGCCTTCGTGCTTCCAGTAATGACCGTAGCCTTCCTTTCGTCAACTCCAATAGTTCTCTACCCGATGATGAG GGTAAGGAGAAAGCTTGCAAGGGCGGGAATTCTCGACAGTTCTCTTGACGGCATTTCCGTTGGAAAATTCAACTGGAAAA GGATTGGTATTTTTGGCCCCCTGACGGCCCTGAATTACTTCATCCTCTTCCACGATCCGGACTGGTGGCCGAGGTTCGTG ACTTCGATACCACAGCATGAACCTCTCACCGCAGCTCTGCTTTCTATCGGGGTGATTCTATTTGCCATTTACTGGAGCTT CGTTCACGGCAGCTTTGCCTACGGTATCCTTGATTTCATAAGAATAGCACCTTTAAAGAGAGAGGTGGCAGATATAATTG CGAAAGACGGTATATCGGGTTTGGAGGCGTGGATAGACTACATGGAAAGGGAATTTGGGAAGGATAAGTGGCCTGTCTGG TGA
Upstream 100 bases:
>100_bases GGCCACGACCCGAGCCTTGAGGGCAGAGTTTTTCCATAATTTTTCGTATTAATTTTTAATAAATGGAAAGATTTATCATT ACTTCTTCCTACAGTTTATT
Downstream 100 bases:
>100_bases GTGTTCAGCTATGCACAAACAACCAGAAGATTTATCTTTAGCCTCGCTTACAATCACATCAGATGGAAGCTGTTGAGGAG ACGGATACCAACTCGAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MGGAFAQGGSAMTPDMFIHIGPFEALFLLALGFFGGMLSGFIGTGGAFVLTPGMMSIGTPGPIAVASNMCHKFPKAMIGA YRRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLGPTGTNLYVSVAFLIVLPTVAAVLIRDVVKARRMGISDLEP RFAAKLEQKFRIPPVIKFNIVGREQSAWLTIPLGFGTGFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGST GTFTWIYLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRALAVPGYLVELGWVELDESVVN LLNAFVLPVMTVAFLSSTPIVLYPMMRVRRKLARAGILDSSLDGISVGKFNWKRIGIFGPLTALNYFILFHDPDWWPRFV TSIPQHEPLTAALLSIGVILFAIYWSFVHGSFAYGILDFIRIAPLKREVADIIAKDGISGLEAWIDYMEREFGKDKWPVW
Sequences:
>Translated_480_residues MGGAFAQGGSAMTPDMFIHIGPFEALFLLALGFFGGMLSGFIGTGGAFVLTPGMMSIGTPGPIAVASNMCHKFPKAMIGA YRRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLGPTGTNLYVSVAFLIVLPTVAAVLIRDVVKARRMGISDLEP RFAAKLEQKFRIPPVIKFNIVGREQSAWLTIPLGFGTGFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGST GTFTWIYLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRALAVPGYLVELGWVELDESVVN LLNAFVLPVMTVAFLSSTPIVLYPMMRVRRKLARAGILDSSLDGISVGKFNWKRIGIFGPLTALNYFILFHDPDWWPRFV TSIPQHEPLTAALLSIGVILFAIYWSFVHGSFAYGILDFIRIAPLKREVADIIAKDGISGLEAWIDYMEREFGKDKWPVW >Mature_479_residues GGAFAQGGSAMTPDMFIHIGPFEALFLLALGFFGGMLSGFIGTGGAFVLTPGMMSIGTPGPIAVASNMCHKFPKAMIGAY RRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLGPTGTNLYVSVAFLIVLPTVAAVLIRDVVKARRMGISDLEPR FAAKLEQKFRIPPVIKFNIVGREQSAWLTIPLGFGTGFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGSTG TFTWIYLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRALAVPGYLVELGWVELDESVVNL LNAFVLPVMTVAFLSSTPIVLYPMMRVRRKLARAGILDSSLDGISVGKFNWKRIGIFGPLTALNYFILFHDPDWWPRFVT SIPQHEPLTAALLSIGVILFAIYWSFVHGSFAYGILDFIRIAPLKREVADIIAKDGISGLEAWIDYMEREFGKDKWPVW
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52166; Mature: 52035
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAFAQGGSAMTPDMFIHIGPFEALFLLALGFFGGMLSGFIGTGGAFVLTPGMMSIGTP CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHCCCC GPIAVASNMCHKFPKAMIGAYRRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PTGTNLYVSVAFLIVLPTVAAVLIRDVVKARRMGISDLEPRFAAKLEQKFRIPPVIKFNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEE VGREQSAWLTIPLGFGTGFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGST ECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCC GTFTWIYLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPGYLVELGWVELDESVVNLLNAFVLPVMTVAFLSSTPIVLYPMMRVRRKLARAGILDS CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC SLDGISVGKFNWKRIGIFGPLTALNYFILFHDPDWWPRFVTSIPQHEPLTAALLSIGVIL CCCCCEECCCCCEEEECCCCHHHHEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHH FAIYWSFVHGSFAYGILDFIRIAPLKREVADIIAKDGISGLEAWIDYMEREFGKDKWPVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GGAFAQGGSAMTPDMFIHIGPFEALFLLALGFFGGMLSGFIGTGGAFVLTPGMMSIGTP CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHCCCC GPIAVASNMCHKFPKAMIGAYRRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PTGTNLYVSVAFLIVLPTVAAVLIRDVVKARRMGISDLEPRFAAKLEQKFRIPPVIKFNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEE VGREQSAWLTIPLGFGTGFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGST ECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCC GTFTWIYLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPGYLVELGWVELDESVVNLLNAFVLPVMTVAFLSSTPIVLYPMMRVRRKLARAGILDS CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC SLDGISVGKFNWKRIGIFGPLTALNYFILFHDPDWWPRFVTSIPQHEPLTAALLSIGVIL CCCCCEECCCCCEEEECCCCHHHHEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHH FAIYWSFVHGSFAYGILDFIRIAPLKREVADIIAKDGISGLEAWIDYMEREFGKDKWPVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA