Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11499099

GI number: 11499099

Start: 1357888

End: 1358493

Strand: Reverse

Name: Not Available

Synonym: AF1504

Alternate gene names: NA

Gene position: 1358493-1357888 (Counterclockwise)

Preceding gene: 11499100

Following gene: 11499098

Centisome position: 62.36

GC content: 44.55

Gene sequence:

>606_bases
GTGTTGTACATGGACGACGAATGTCAAAAATTGCTGGCAGAGAAAGAGGCTATTATCAGAGAACTTCAAGAAAAAGTCAA
GGAGCTTGAAGCAAAGTTAAAATCCTACGAGATTAGAGAAGTTTATAAAGGAATAATACCCGATGATGTTCTGGAAGAGT
TCGTGAAGCTTCCACCAGAACAGATGATCATAGAAATAGGGAGGTATCTGAGGGAGAAAGGGTCAACAGGACAGGTTGAG
GCCAAGAAAACAGTTAATGACGTCAGGCAGGAAATAGCCTCGGTCGAGGAAGAGGTCTCAAAAGCCGAAAAAGAAATTGA
AAAAACAATATCAACCATAACGGGTGCGGCAAAGACGAAGGTTGGTGTTGACCTCACCTTCACACAAAAGTACGATTATG
AGGGAAGCGACGTTGCTTTTCTGGCGGAGGACATCATGAACGCCATTGGCGTCAAAGAGGGTGAGTACGTGAGCGTTAAG
AAAAATGGAACCGTGAACCTGAGGGTTTTACCCTACTCCAAGGAGGGATTTATTGTTGTCCCCACGTGGGTTAGGGAGAA
GCTTGGTGTTAAGGTTAACGACTTTGTGGAGGTGGTTAGGAGATGA

Upstream 100 bases:

>100_bases
TAACAGACATCGTTGGAACAACAGCCGTTGTGGTTTTGGCATATTTAATTGCATAAAGTTTTTATTTGAAGACCACCAAA
CACATTACAATTATTAGGAG

Downstream 100 bases:

>100_bases
AGTTGACGCCCCAAATTGTTTTGATAGTGGTTGTTGCAAGCCTTGTGCCCCTGAGCGTTCTTGGTTATCTTACCATAGCT
GGGATGACATCCTCTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLYMDDECQKLLAEKEAIIRELQEKVKELEAKLKSYEIREVYKGIIPDDVLEEFVKLPPEQMIIEIGRYLREKGSTGQVE
AKKTVNDVRQEIASVEEEVSKAEKEIEKTISTITGAAKTKVGVDLTFTQKYDYEGSDVAFLAEDIMNAIGVKEGEYVSVK
KNGTVNLRVLPYSKEGFIVVPTWVREKLGVKVNDFVEVVRR

Sequences:

>Translated_201_residues
MLYMDDECQKLLAEKEAIIRELQEKVKELEAKLKSYEIREVYKGIIPDDVLEEFVKLPPEQMIIEIGRYLREKGSTGQVE
AKKTVNDVRQEIASVEEEVSKAEKEIEKTISTITGAAKTKVGVDLTFTQKYDYEGSDVAFLAEDIMNAIGVKEGEYVSVK
KNGTVNLRVLPYSKEGFIVVPTWVREKLGVKVNDFVEVVRR
>Mature_201_residues
MLYMDDECQKLLAEKEAIIRELQEKVKELEAKLKSYEIREVYKGIIPDDVLEEFVKLPPEQMIIEIGRYLREKGSTGQVE
AKKTVNDVRQEIASVEEEVSKAEKEIEKTISTITGAAKTKVGVDLTFTQKYDYEGSDVAFLAEDIMNAIGVKEGEYVSVK
KNGTVNLRVLPYSKEGFIVVPTWVREKLGVKVNDFVEVVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1504_ARCFU (O28768)

Other databases:

- EMBL:   AE000782
- PIR:   G69437
- RefSeq:   NP_070333.1
- GeneID:   1484731
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1504
- NMPDR:   fig|224325.1.peg.1494
- TIGR:   AF_1504
- BioCyc:   AFUL224325:AF_1504-MONOMER
- InterPro:   IPR009010
- InterPro:   IPR003338
- Gene3D:   G3DSA:2.40.40.20

Pfam domain/function: PF02359 CDC48_N; SSF50692 Asp_decarb_fold

EC number: NA

Molecular weight: Translated: 22882; Mature: 22882

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYMDDECQKLLAEKEAIIRELQEKVKELEAKLKSYEIREVYKGIIPDDVLEEFVKLPPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
QMIIEIGRYLREKGSTGQVEAKKTVNDVRQEIASVEEEVSKAEKEIEKTISTITGAAKTK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVDLTFTQKYDYEGSDVAFLAEDIMNAIGVKEGEYVSVKKNGTVNLRVLPYSKEGFIVV
CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCEEEE
PTWVREKLGVKVNDFVEVVRR
CHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MLYMDDECQKLLAEKEAIIRELQEKVKELEAKLKSYEIREVYKGIIPDDVLEEFVKLPPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
QMIIEIGRYLREKGSTGQVEAKKTVNDVRQEIASVEEEVSKAEKEIEKTISTITGAAKTK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVDLTFTQKYDYEGSDVAFLAEDIMNAIGVKEGEYVSVKKNGTVNLRVLPYSKEGFIVV
CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCEEEE
PTWVREKLGVKVNDFVEVVRR
CHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475