Definition Archaeoglobus fulgidus DSM 4304, complete genome.
Accession NC_000917
Length 2,178,400

Click here to switch to the map view.

The map label for this gene is iorA

Identifier: 11499084

GI number: 11499084

Start: 1345963

End: 1347834

Strand: Reverse

Name: iorA

Synonym: AF1489

Alternate gene names: 11499084

Gene position: 1347834-1345963 (Counterclockwise)

Preceding gene: 11499089

Following gene: 11499083

Centisome position: 61.87

GC content: 51.28

Gene sequence:

>1872_bases
ATGCTCAACGATGTTGTCAGAGACGCAGAGGGTGAAAAGGTATTTCTGCTCGGCAATGAAGCCATTGCGAGAGGAGCAAT
AGAGGCTGGAATTGACGTTTTTGCCGCTTATCCCGGCACCCCCTCATCTGAAATTGCCGATACTCTGAGCGATGCTTGCA
GGCTTCTGAGAGGAAAGATGGATTTTTACATGGAGTACTCTGCAAACGAAAAGGTTGCCTTTGAGGTTGCCGTTGGAGCT
TCTCTTGCTGGAAAAAGAGCAATGGCAACGATGAAGCACGTTGGAGTTAATGTTGCTGCTGACCCTCTCTTCAGCTTTGC
CTACGTTGGTGCGAGAGGTGGGTTTGTGCTTGTCACCGCAGACGACCCATCAATGCACAGCAGCCAGAACGAGCAGGACA
ACAGGTGGTACGGAAAAGCTGCAAAGCTTCCTGTTGTTGAACCGTCAAGCGTGCAGGAGGCTAAGGACTATGCAAAGCTC
TGCTTTGACCTTTCCGAAAAATTCGGCCTGCCAATGATTTTGAGGAGCTACACGAGGCTGAGCCATGCAAGCGGTGTCGT
TGAGCTTGGAAAAATCCCTGAGAAGGAGTTCAGCAGGGTTGAGTGGGAGAGGCATCCCGAAACCGATGTGGTTTTGCCCG
CTCATGCGAGAAAGTTGAAGCCAATTTTGCTGGAGAAGCTGGAGAAGATTGAGAGGTATTTCAACAGCTCTGAGATGAAC
TGGGTTGATGAGGGGGATGGGGATGTTGGCATTATTGCCTGCGGTCTGAGCTACGCCTACACCAAGGAGGCTCTCGAGAA
CCTGAATCTAAACCTGCCCGTTTTGAAGCTCTCGTCAATGCACCCTCTGCCAGAGAGGCTTATTGAGAATTTTGTATCCC
AGATGAAGAAGGTCATAGTCGTTGAGGAGGTTGACCCATTTGTGGAGCTTCATGTTAGAGCGATGGGACTGGCCGAGGTT
TACGGCAAGATGAACGGCTACATGCCCATGAACTATGAATACAACGTGGGGAGAGTTGAGACGGGGATTGCCAAGGCTCT
TGGAATTAAACCGAGCAGAGATTATGAGGGCATTGTTGCAGAATCGCAAAAGCTTGCCGCAAAAGCTCCGCCAAGACCTC
CAGTTCTCTGTCCCGGCTGTCCCCACTCGGCCTCCTTCTATGCGATACGGAGAGTTGTTGACGAGCTTGGAGATGCAGCT
TTGCCCAGCGACATCGGCTGCTACACTCTCGGGATAAATAAGCCCCTTGAGGGGGTGGACATAACAATCTGCATGGGTGC
AAGCGTTGGAGTCTCAAATGGCCTTGCTCATGTTCTTAACAACAAAATCATAGCAACGATTGGGGATTCTACCTTCATCC
ACGCTGGCATTCCACCGCTGATAAATGCCGTGTACAACCACGCTGATTTCGTGCTGGTAATCCTCGACAACTCCACCACA
GGAATGACGGGACATCAGCCACATCCGGGGACGGGCTTCAGGGGATGCGGAGAGGCAGGAAAGGCTGTCAGGATTGAGGA
CATTGTGAGGGGATGCGGTGTTGAGTTTGTTGAGGTGGTGAACCCCTACAATGTCAGAAAGATGGTTGACGTGCTGAGGA
GGGCTTTGAATCACGATGGAGTTGCGGTGGTTATTGCGAGGCAGCCCTGCGCGATACTTTGGTCGAGGGCGAGGAGAAGG
GAGGGTAAGATTGTAACTTACAAGGTTACAGAGGACTGCACTCTCTGCATGGAGTGTGTCAACACCTTCGCCTGTCCGGC
ACTGATTTTTGACGGTGAAAAGGTCAGCATTGACCAGTCCCTCTGCGTGGGATGTGCTGTCTGCGCGAAAATCTGTCCGA
ACAGAGCGATTAAGCCTGCAAAAAGTAATTAA

Upstream 100 bases:

>100_bases
TTTTAAGTTATCGGTTCTCTGAAATGGGCAGATAAAATTTCAAAATTAAAAAGCACAGACAGAAGGGGAAACGTTTTAAT
TCCTCTTATAAACTGCCGCC

Downstream 100 bases:

>100_bases
ACTTTCTACCTATTTATTTCATGGCCAGACCATTGAGGGCCCTGATATTTGGCAGGTTTCAGCCCTTCCACCTCGGCCAT
CTTAAGGTCACGAAATGGGC

Product: indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA)

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MLNDVVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYMEYSANEKVAFEVAVGA
SLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTADDPSMHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKL
CFDLSEKFGLPMILRSYTRLSHASGVVELGKIPEKEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN
WVDEGDGDVGIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIVVEEVDPFVELHVRAMGLAEV
YGKMNGYMPMNYEYNVGRVETGIAKALGIKPSRDYEGIVAESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAA
LPSDIGCYTLGINKPLEGVDITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNSTT
GMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDGVAVVIARQPCAILWSRARRR
EGKIVTYKVTEDCTLCMECVNTFACPALIFDGEKVSIDQSLCVGCAVCAKICPNRAIKPAKSN

Sequences:

>Translated_623_residues
MLNDVVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYMEYSANEKVAFEVAVGA
SLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTADDPSMHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKL
CFDLSEKFGLPMILRSYTRLSHASGVVELGKIPEKEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN
WVDEGDGDVGIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIVVEEVDPFVELHVRAMGLAEV
YGKMNGYMPMNYEYNVGRVETGIAKALGIKPSRDYEGIVAESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAA
LPSDIGCYTLGINKPLEGVDITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNSTT
GMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDGVAVVIARQPCAILWSRARRR
EGKIVTYKVTEDCTLCMECVNTFACPALIFDGEKVSIDQSLCVGCAVCAKICPNRAIKPAKSN
>Mature_623_residues
MLNDVVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKMDFYMEYSANEKVAFEVAVGA
SLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTADDPSMHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKL
CFDLSEKFGLPMILRSYTRLSHASGVVELGKIPEKEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN
WVDEGDGDVGIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIVVEEVDPFVELHVRAMGLAEV
YGKMNGYMPMNYEYNVGRVETGIAKALGIKPSRDYEGIVAESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAA
LPSDIGCYTLGINKPLEGVDITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNSTT
GMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDGVAVVIARQPCAILWSRARRR
EGKIVTYKVTEDCTLCMECVNTFACPALIFDGEKVSIDQSLCVGCAVCAKICPNRAIKPAKSN

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates

COG id: COG4231

COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IORA_ARCFU (O28783)

Other databases:

- EMBL:   AE000782
- PIR:   H69435
- RefSeq:   NP_070318.1
- ProteinModelPortal:   O28783
- GeneID:   1484716
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1489
- NMPDR:   fig|224325.1.peg.1479
- TIGR:   AF_1489
- HOGENOM:   HBG733885
- OMA:   VADDPSM
- ProtClustDB:   CLSK2746922
- BioCyc:   AFUL224325:AF_1489-MONOMER
- BRENDA:   1.2.7.8
- GO:   GO:0006810
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017721
- InterPro:   IPR002880
- InterPro:   IPR011766
- InterPro:   IPR009014
- InterPro:   IPR015941
- Gene3D:   G3DSA:3.40.50.920
- TIGRFAMs:   TIGR03336

Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C; SSF52922 Transketo_C_like

EC number: =1.2.7.8

Molecular weight: Translated: 67799; Mature: 67799

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDVVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKM
CCCHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
DFYMEYSANEKVAFEVAVGASLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTA
CEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC
DDPSMHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKLCFDLSEKFGLPMILRSYTRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SHASGVVELGKIPEKEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN
HHHCCCHHHCCCCHHHHHHCCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCCCC
WVDEGDGDVGIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIV
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEE
VEEVDPFVELHVRAMGLAEVYGKMNGYMPMNYEYNVGRVETGIAKALGIKPSRDYEGIVA
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHH
ESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAALPSDIGCYTLGINKPLEGVD
CCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCE
ITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNSTT
EEEEECCCCCCCCCHHHHHCCCEEEEECCCEEEECCCCHHHHHHHCCCCEEEEEEECCCC
GMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDG
CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
VAVVIARQPCAILWSRARRREGKIVTYKVTEDCTLCMECVNTFACPALIFDGEKVSIDQS
EEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCEEECCHH
LCVGCAVCAKICPNRAIKPAKSN
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLNDVVRDAEGEKVFLLGNEAIARGAIEAGIDVFAAYPGTPSSEIADTLSDACRLLRGKM
CCCHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
DFYMEYSANEKVAFEVAVGASLAGKRAMATMKHVGVNVAADPLFSFAYVGARGGFVLVTA
CEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC
DDPSMHSSQNEQDNRWYGKAAKLPVVEPSSVQEAKDYAKLCFDLSEKFGLPMILRSYTRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SHASGVVELGKIPEKEFSRVEWERHPETDVVLPAHARKLKPILLEKLEKIERYFNSSEMN
HHHCCCHHHCCCCHHHHHHCCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCCCC
WVDEGDGDVGIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVIV
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEE
VEEVDPFVELHVRAMGLAEVYGKMNGYMPMNYEYNVGRVETGIAKALGIKPSRDYEGIVA
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHH
ESQKLAAKAPPRPPVLCPGCPHSASFYAIRRVVDELGDAALPSDIGCYTLGINKPLEGVD
CCHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCE
ITICMGASVGVSNGLAHVLNNKIIATIGDSTFIHAGIPPLINAVYNHADFVLVILDNSTT
EEEEECCCCCCCCCHHHHHCCCEEEEECCCEEEECCCCHHHHHHHCCCCEEEEEEECCCC
GMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDG
CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
VAVVIARQPCAILWSRARRREGKIVTYKVTEDCTLCMECVNTFACPALIFDGEKVSIDQS
EEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCEEECCHH
LCVGCAVCAKICPNRAIKPAKSN
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475