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The map label for this gene is isf-1

Identifier: 11499031

GI number: 11499031

Start: 1294137

End: 1294799

Strand: Reverse

Name: isf-1

Synonym: AF1436

Alternate gene names: NA

Gene position: 1294799-1294137 (Counterclockwise)

Preceding gene: 11499032

Following gene: 11499027

Centisome position: 59.44

GC content: 50.23

Gene sequence:

>663_bases
ATGAAGGCTGTCGGTATTCTCGGCTCACCGAGAAAGTACGGAAATGCATCCAAAATGCTCGATGCTGCACTGAAGGAGCT
CGAAAATAGCGGGTTTGAGGTCGAGAAGGTGCACATTTCCTCGAAAAAAATCAACTACTGCACTGGTTGCGGCACATGCC
TGGCAAAGGGGGAGTGCGTGCAGAGAGACGACATGGACGAGTTGAAAAGGCTTGTTGAGGAGAGCGATGCTGTAATCCTT
GCCTCTCCTGTTTATTATCTCAACGTAACAGCACAGATGAAGACCTTTATCGACAGAATGCTCCCCTACGGCCACAGGCC
GACACTCAAGGGCAAGTACGGGGGGAGCATCGTTGTCTATGCAGGAGTTGGAAAACCCGAAGAGGTTGCGGGCTACATGA
ACAGGGTGCTAAAGGCTTGGGGGATAGTGCCAGTTGGCTACGCAGTGGGATTCGGCGTGATTCCGGGAGAGGTTGGAGAT
GAGGACTTGAAGAAGGCTTCCCAGCTCGGCTCTAAAATCGCCGAGGCTTTTGAGAGCAAATACAGAATGGAGCCGAGCGA
TGAGGATTTGGAGCTTCAAAAACAGCTTTTGACTCTGATAAAGAACTACGGACACCTGATGAAGGCAGACTACGAGTTCT
GGAAGGAAAAAGGATTTATTTAA

Upstream 100 bases:

>100_bases
ATATAATGGAGAACTCCGATTTTGGCGAAGTTCTCGAAAAGTCGAAGAGGATGAGGGTCAGGCTAAGGGGGCTTGCCGGA
GAACTGGGGTAGGTGGTGCG

Downstream 100 bases:

>100_bases
TTATTATTTTGTTCCCCTCAAACTTCACAACCTTCCCCAAAAAGGTGTTTATCACGTAAGCGTTGCTCTTCTGATGCATT
GTAACCTCGCTTGTGGTGTA

Product: iron-sulfur flavoprotein (isf-1)

Products: NA

Alternate protein names: AF-1; Af1; Isf-1

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKAVGILGSPRKYGNASKMLDAALKELENSGFEVEKVHISSKKINYCTGCGTCLAKGECVQRDDMDELKRLVEESDAVIL
ASPVYYLNVTAQMKTFIDRMLPYGHRPTLKGKYGGSIVVYAGVGKPEEVAGYMNRVLKAWGIVPVGYAVGFGVIPGEVGD
EDLKKASQLGSKIAEAFESKYRMEPSDEDLELQKQLLTLIKNYGHLMKADYEFWKEKGFI

Sequences:

>Translated_220_residues
MKAVGILGSPRKYGNASKMLDAALKELENSGFEVEKVHISSKKINYCTGCGTCLAKGECVQRDDMDELKRLVEESDAVIL
ASPVYYLNVTAQMKTFIDRMLPYGHRPTLKGKYGGSIVVYAGVGKPEEVAGYMNRVLKAWGIVPVGYAVGFGVIPGEVGD
EDLKKASQLGSKIAEAFESKYRMEPSDEDLELQKQLLTLIKNYGHLMKADYEFWKEKGFI
>Mature_220_residues
MKAVGILGSPRKYGNASKMLDAALKELENSGFEVEKVHISSKKINYCTGCGTCLAKGECVQRDDMDELKRLVEESDAVIL
ASPVYYLNVTAQMKTFIDRMLPYGHRPTLKGKYGGSIVVYAGVGKPEEVAGYMNRVLKAWGIVPVGYAVGFGVIPGEVGD
EDLKKASQLGSKIAEAFESKYRMEPSDEDLELQKQLLTLIKNYGHLMKADYEFWKEKGFI

Specific function: Redox-active protein probably involved in electron transport

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ISF1_ARCFU (O28836)

Other databases:

- EMBL:   AE000782
- PIR:   C69429
- RefSeq:   NP_070265.1
- ProteinModelPortal:   O28836
- GeneID:   1484660
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1436
- NMPDR:   fig|224325.1.peg.1426
- TIGR:   AF_1436
- HOGENOM:   HBG729844
- OMA:   IAIRERR
- ProtClustDB:   CLSK2746907
- BioCyc:   AFUL224325:AF_1436-MONOMER
- InterPro:   IPR005025

Pfam domain/function: PF03358 FMN_red

EC number: NA

Molecular weight: Translated: 24361; Mature: 24361

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVGILGSPRKYGNASKMLDAALKELENSGFEVEKVHISSKKINYCTGCGTCLAKGECV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCHHHHHCCCCC
QRDDMDELKRLVEESDAVILASPVYYLNVTAQMKTFIDRMLPYGHRPTLKGKYGGSIVVY
CCCCHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
AGVGKPEEVAGYMNRVLKAWGIVPVGYAVGFGVIPGEVGDEDLKKASQLGSKIAEAFESK
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YRMEPSDEDLELQKQLLTLIKNYGHLMKADYEFWKEKGFI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAVGILGSPRKYGNASKMLDAALKELENSGFEVEKVHISSKKINYCTGCGTCLAKGECV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCHHHHHCCCCC
QRDDMDELKRLVEESDAVILASPVYYLNVTAQMKTFIDRMLPYGHRPTLKGKYGGSIVVY
CCCCHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
AGVGKPEEVAGYMNRVLKAWGIVPVGYAVGFGVIPGEVGDEDLKKASQLGSKIAEAFESK
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YRMEPSDEDLELQKQLLTLIKNYGHLMKADYEFWKEKGFI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475