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The map label for this gene is ribC

Identifier: 11499011

GI number: 11499011

Start: 1276126

End: 1276587

Strand: Reverse

Name: ribC

Synonym: AF1416

Alternate gene names: 11499011

Gene position: 1276587-1276126 (Counterclockwise)

Preceding gene: 11499012

Following gene: 11499010

Centisome position: 58.6

GC content: 52.6

Gene sequence:

>462_bases
ATGAAGATTGGCATTGCAGACACGACCTTCTCAAGGATAAACATGGGGAAGATAGCGATAGACGAGCTGAGGAAGATAAG
CAGCATCCCCTACGAGCGCTACACAGTGCCGGGCATAAAGGACTTGCCCATTGCAGCGAAAAAGCTTCTTGAGGAGAAGG
GGTGCGATATAGTCATCACTCTCGGCTGGGTTGGAGGGACGCAGAAGGACATGCTGAGCTACATCGTTCTGAGCATGGGA
CTGGTTATAGTTCAGCTCATGACCAACAAGCACGTCATTGACGTCACAATCCACGAGGATGAGGCGGAGGACGAGAAAAC
GCTGATGATGGTCGCTGAGAACAGAGTCAGGGAGCATGTCAGGAATGCGGTTGACTTGCTTGTCAATCCGAAGAGGTTGC
AGAAGCTTGCGGGAACGGGGCAGAGGCAGGGGTATCCTGACGTGGGGCCGATTTTGAAGTGA

Upstream 100 bases:

>100_bases
AGACAGTCTCAACTCTGGCGGCGCTTGAGGACGTGCTGATGAGGAAGAACGCCATTAAGCCGGCACTGCAGTATGCTCAG
ATATTGCTGAGGGATTTGCA

Downstream 100 bases:

>100_bases
TTTTTGTTTTTTATTTCATAAAACTCAGCCCAACTTTCAAAGTTTACTTCTTTGCTCCAAAGCTTCAATTGACACCGTAT
TGATAAATACAAAGCTTTAT

Product: riboflavin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKIGIADTTFSRINMGKIAIDELRKISSIPYERYTVPGIKDLPIAAKKLLEEKGCDIVITLGWVGGTQKDMLSYIVLSMG
LVIVQLMTNKHVIDVTIHEDEAEDEKTLMMVAENRVREHVRNAVDLLVNPKRLQKLAGTGQRQGYPDVGPILK

Sequences:

>Translated_153_residues
MKIGIADTTFSRINMGKIAIDELRKISSIPYERYTVPGIKDLPIAAKKLLEEKGCDIVITLGWVGGTQKDMLSYIVLSMG
LVIVQLMTNKHVIDVTIHEDEAEDEKTLMMVAENRVREHVRNAVDLLVNPKRLQKLAGTGQRQGYPDVGPILK
>Mature_153_residues
MKIGIADTTFSRINMGKIAIDELRKISSIPYERYTVPGIKDLPIAAKKLLEEKGCDIVITLGWVGGTQKDMLSYIVLSMG
LVIVQLMTNKHVIDVTIHEDEAEDEKTLMMVAENRVREHVRNAVDLLVNPKRLQKLAGTGQRQGYPDVGPILK

Specific function: Unknown

COG id: COG1731

COG function: function code H; Archaeal riboflavin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RISC_ARCFU (O28856)

Other databases:

- EMBL:   AE000782
- PIR:   G69426
- RefSeq:   NP_070245.1
- ProteinModelPortal:   O28856
- SMR:   O28856
- GeneID:   1484640
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1416
- NMPDR:   fig|224325.1.peg.1406
- TIGR:   AF_1416
- HOGENOM:   HBG297721
- OMA:   GTGQRQG
- ProtClustDB:   PRK06455
- BioCyc:   AFUL224325:AF_1416-MONOMER
- BRENDA:   2.5.1.9
- InterPro:   IPR002180
- InterPro:   IPR006399
- Gene3D:   G3DSA:3.40.50.960
- PIRSF:   PIRSF015750
- TIGRFAMs:   TIGR01506

Pfam domain/function: PF00885 DMRL_synthase; SSF52121 DMRL_synthase

EC number: =2.5.1.9

Molecular weight: Translated: 17083; Mature: 17083

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIADTTFSRINMGKIAIDELRKISSIPYERYTVPGIKDLPIAAKKLLEEKGCDIVIT
CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCEEEE
LGWVGGTQKDMLSYIVLSMGLVIVQLMTNKHVIDVTIHEDEAEDEKTLMMVAENRVREHV
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
RNAVDLLVNPKRLQKLAGTGQRQGYPDVGPILK
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIGIADTTFSRINMGKIAIDELRKISSIPYERYTVPGIKDLPIAAKKLLEEKGCDIVIT
CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCEEEE
LGWVGGTQKDMLSYIVLSMGLVIVQLMTNKHVIDVTIHEDEAEDEKTLMMVAENRVREHV
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
RNAVDLLVNPKRLQKLAGTGQRQGYPDVGPILK
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475