| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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Identifier: 11499004
GI number: 11499004
Start: 1258647
End: 1261556
Strand: Reverse
Name: Not Available
Synonym: AF1409
Alternate gene names: 11499004
Gene position: 1261556-1258647 (Counterclockwise)
Preceding gene: 11499005
Following gene: 11499003
Centisome position: 57.91
GC content: 44.16
Gene sequence:
>2910_bases ATGGGTAGTATGGAGGGCAAAAGCGACCTGAAAGAGAAATTGAAGGCAAATTTAAGAGAAATGTTTCAATTCGAGAATGC TGATCTGGACTTTGGCATCTACAGGATAATGAACTACAGGCGGGAGGAGATTGAAAGGTTCATCGAGAAGGATTTAATTG AGGAAATTGAAAATCAGCTGAAATTGGCTGAAGAGCTGGAGAAGGAGGTTTACAATCATCTGATAACGTTCTTCTCAAGG TACTATGACAAAGGCGACTTCATAAGCAAAAGGAGATACGGAAGGAATGAAAAGTACGTCGTTCCCTACAACGGTGAGGA GGTTTTGCTTTACTGGGCAAACAAGGATCAATATTACGTAAAAACCACCGAATGCTTCGGGAGGTACACGTTTAGGGTTA AGGAGTTGACCGTTAACTTTAGAGTTGTGGAGGCAGAGGAGGAGAAGGGCAACATAAAGTCACCGGAGAGGAAGTTTTTC GTTTTAAGTGAAAAAATAGCGGACTTCGACGAGGAGAGGAGGGAGCTGAACATATACTTTGAATACAGAGGTCTTACTGA GGAGGAAGAGAAAAGGTTCAAGCGAATAACGCAGGATAGAATCAACGAGGAAACGGTTAGGATTTTGCAGAGAAAGATTC CGGAAAAAAGTTTGGCAAGACTAATCTTCGAAAAAGACCCGAACTCCCAGAAGGGCAGGAGTTACATTGAAAGGCATCTC TACAATTACACCAGAAGAAACACGACAGACTATTTCATTCACAGGGATTTGAGGGGATTTCTGGAGCGTGAATTGGACTT TTACATTAAAAACGAGTTTTTGCAGCTGGAGGACCTGCAGGTTTTGGAGGAGAGCAAATATTTTGAGAGGCTGAGACTTT ACCTTGCTGGAATGAGGGTTTTCAGAAGAATCGCTCTGAAGATAATCGATTTTCTGGCGCAGATTGAAAACTTTCAGAAG AGGCTCTGGGAAAAGAAGAAGTTCGTTGTTGATACGCATTACGTAATCACACTGGACAGGATTAAGGAGTATGCTGGAGA AGAGTTCCTAGAAAGCATTCTTGACGAGATTTTGAGCAACGAAAGGCAGAGAGAGGAGTGGAGGGAGCTTTTCGGCATCG AAGTTAAGGGAAAAGGCGACCTCCTTTCCGGCCACACTCTGGAGGGAAAGGAGTGGAAAAAGCTGCCGATTGACACGAGA CATTTCAGCGAGAGCTTTAAGTGGAAATTGGTGGACGCTTTAACCAGGGAAAATGATTTGGATGAGATTTTGGATGGTGT TTTGATAAAAAGCGAGAACTTTCACGCCTTAAATCTGCTGCTGAGCAAGTACTACGAAAAGGTTCAGACGATCTACATCG ACCCTCCCTTCAACAAAGAGCAGGAAGCTGACTTTCTCTATAAGGTTGGTTACAAGGATGCAACGTGGATAACGATGCTT GAAAACAGAATCAGGCTTGGGAGGGAGTTGCTGAACGAAAGGGGTAGTATTTTCGTCAGGTGTGATTACAACGGCAACGC CTACTTAAAGCTTTTGTTGAATGAGATATTCGGCAAGGACAACTACAGAAACGAAATCATAGTGAACAGAAAGAGGCAGA GCATAGGCACACCCAACAAGTTTGAAGTTGAGAGCGAGTATCTGCTCTTTTATTCAAAATCGGACAATTATTTGAGAAGG GACCTGTACAGGAAGAGAAGTCTCGTGGACTTCAAATGGACGGGCTTTTTAAACCAGGGGGAGAGGAATCCGCCGGAAAG GACGTTCTTCGGGAAAGTTCTGTATCCACCGAAGGGGCAGCATTTTTCATTGGTGCAGGAGAAGGTGGACAAACTCCTGA AAGAACACTTTTTGAGACTGAAGTGCAAAAAATGCGGGGCCGTTTATTACTGGGACGAAGAGGAGTCGAAAGAAAAGTTC AGAAATAAGATTTTGGCAAGTAAAACTGAGGCGTTCAAGTACTTTGACATAAAACCAGAGACAGCCGTTTTCGGTGTCAC AAAAATTGACAGGTGCTTAAACTGCGGCGGAGATGACTGGAAGGTTGAGTATCTAACCTCCGATGAGGTTAAGATAACCG ACAACTGGAAGGACATCCCATCCTATTCCGACGGCTTCAAGTTCTCCACTGAAAACTCCGAAATTCTACTGAAGCGCGTC ATAGAATCGACATCCAACGAGGGTGATCTGGTTCTGGACTTCTTTCTCGGCTCGGGAACGACAACGGCGGTTGCCCAGAA ACTCAGAAGAAAGTGGATTGGCGTTGAGATGGGAGAACACTTTTGGTCAGTGGTTTTGCCGAGAATGAAAAAGGTTCTGT TCTACGACAAGTCCGGCATAAGCAAGGAGAAGGACGTCAGGGAAAAATACAACGAAAAAACGGCGGGAGGGTTTTTCAAA TACCACACGCTGGAGCAGTACGAGGATGCGCTGGAAAACGTTGAGTTTGGGGAGGTGCAGAGAGTACTGTACGATTTCAC AGATTATTTTGTCAGATACATGCTCGAATGGGAAACCAAGCACAGCAAGACGTTCCTCGACATTGATGAGCTGGTAGACC CCTTTAGCTACAGGCTGAGAATCATGGAGAACTACCGGCAAAAGGTGGTTAATGCCGACTTGGTTGAGACCTTCAATTAT TTACTTGGCTTGAATGTGGCCAAGTACAGGTTTTTGGAAGAGAACGGAAGAAAATACGTTTTTGTTTTTGGAGAAAAAGA TGGAAAAAGGATTTCTATTGTTTGGAGAAGCGTTGTGGGCATAGATTGGAAGAAAGACAGAGAGGTTATCGAGAGCAACG TAAATGGGTTTGAACCCGACGAGATTTACATTAATGGGGATGCAGCGGTAAAGGGCTTCAGGCCAATAGAGTCGTTGTTT AAATCGTTGATGTTTACACCACAAAATTGA
Upstream 100 bases:
>100_bases TTTGAGGAGTGAAATTAATTCGGGATATCACATCTCGAACACGAAACCGATACGCTCAAAAATGAATGGGTGGTAGGATA ATAAGACTAAAGACTAAGGG
Downstream 100 bases:
>100_bases TATAATAGATGGTAGCATGTTGCCCGGGTTGGCAATGAGCTTGTCAATGGACAGCTTCTCAGTTTGGATGAGGAAAAATT TGAAATCTGCATACGAGGGA
Product: modification methylase, type III R/M system
Products: NA
Alternate protein names: M.HindVIP; HindVIP methyltransferase [H]
Number of amino acids: Translated: 969; Mature: 968
Protein sequence:
>969_residues MGSMEGKSDLKEKLKANLREMFQFENADLDFGIYRIMNYRREEIERFIEKDLIEEIENQLKLAEELEKEVYNHLITFFSR YYDKGDFISKRRYGRNEKYVVPYNGEEVLLYWANKDQYYVKTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFF VLSEKIADFDEERRELNIYFEYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPNSQKGRSYIERHL YNYTRRNTTDYFIHRDLRGFLERELDFYIKNEFLQLEDLQVLEESKYFERLRLYLAGMRVFRRIALKIIDFLAQIENFQK RLWEKKKFVVDTHYVITLDRIKEYAGEEFLESILDEILSNERQREEWRELFGIEVKGKGDLLSGHTLEGKEWKKLPIDTR HFSESFKWKLVDALTRENDLDEILDGVLIKSENFHALNLLLSKYYEKVQTIYIDPPFNKEQEADFLYKVGYKDATWITML ENRIRLGRELLNERGSIFVRCDYNGNAYLKLLLNEIFGKDNYRNEIIVNRKRQSIGTPNKFEVESEYLLFYSKSDNYLRR DLYRKRSLVDFKWTGFLNQGERNPPERTFFGKVLYPPKGQHFSLVQEKVDKLLKEHFLRLKCKKCGAVYYWDEEESKEKF RNKILASKTEAFKYFDIKPETAVFGVTKIDRCLNCGGDDWKVEYLTSDEVKITDNWKDIPSYSDGFKFSTENSEILLKRV IESTSNEGDLVLDFFLGSGTTTAVAQKLRRKWIGVEMGEHFWSVVLPRMKKVLFYDKSGISKEKDVREKYNEKTAGGFFK YHTLEQYEDALENVEFGEVQRVLYDFTDYFVRYMLEWETKHSKTFLDIDELVDPFSYRLRIMENYRQKVVNADLVETFNY LLGLNVAKYRFLEENGRKYVFVFGEKDGKRISIVWRSVVGIDWKKDREVIESNVNGFEPDEIYINGDAAVKGFRPIESLF KSLMFTPQN
Sequences:
>Translated_969_residues MGSMEGKSDLKEKLKANLREMFQFENADLDFGIYRIMNYRREEIERFIEKDLIEEIENQLKLAEELEKEVYNHLITFFSR YYDKGDFISKRRYGRNEKYVVPYNGEEVLLYWANKDQYYVKTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFF VLSEKIADFDEERRELNIYFEYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPNSQKGRSYIERHL YNYTRRNTTDYFIHRDLRGFLERELDFYIKNEFLQLEDLQVLEESKYFERLRLYLAGMRVFRRIALKIIDFLAQIENFQK RLWEKKKFVVDTHYVITLDRIKEYAGEEFLESILDEILSNERQREEWRELFGIEVKGKGDLLSGHTLEGKEWKKLPIDTR HFSESFKWKLVDALTRENDLDEILDGVLIKSENFHALNLLLSKYYEKVQTIYIDPPFNKEQEADFLYKVGYKDATWITML ENRIRLGRELLNERGSIFVRCDYNGNAYLKLLLNEIFGKDNYRNEIIVNRKRQSIGTPNKFEVESEYLLFYSKSDNYLRR DLYRKRSLVDFKWTGFLNQGERNPPERTFFGKVLYPPKGQHFSLVQEKVDKLLKEHFLRLKCKKCGAVYYWDEEESKEKF RNKILASKTEAFKYFDIKPETAVFGVTKIDRCLNCGGDDWKVEYLTSDEVKITDNWKDIPSYSDGFKFSTENSEILLKRV IESTSNEGDLVLDFFLGSGTTTAVAQKLRRKWIGVEMGEHFWSVVLPRMKKVLFYDKSGISKEKDVREKYNEKTAGGFFK YHTLEQYEDALENVEFGEVQRVLYDFTDYFVRYMLEWETKHSKTFLDIDELVDPFSYRLRIMENYRQKVVNADLVETFNY LLGLNVAKYRFLEENGRKYVFVFGEKDGKRISIVWRSVVGIDWKKDREVIESNVNGFEPDEIYINGDAAVKGFRPIESLF KSLMFTPQN >Mature_968_residues GSMEGKSDLKEKLKANLREMFQFENADLDFGIYRIMNYRREEIERFIEKDLIEEIENQLKLAEELEKEVYNHLITFFSRY YDKGDFISKRRYGRNEKYVVPYNGEEVLLYWANKDQYYVKTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFFV LSEKIADFDEERRELNIYFEYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPNSQKGRSYIERHLY NYTRRNTTDYFIHRDLRGFLERELDFYIKNEFLQLEDLQVLEESKYFERLRLYLAGMRVFRRIALKIIDFLAQIENFQKR LWEKKKFVVDTHYVITLDRIKEYAGEEFLESILDEILSNERQREEWRELFGIEVKGKGDLLSGHTLEGKEWKKLPIDTRH FSESFKWKLVDALTRENDLDEILDGVLIKSENFHALNLLLSKYYEKVQTIYIDPPFNKEQEADFLYKVGYKDATWITMLE NRIRLGRELLNERGSIFVRCDYNGNAYLKLLLNEIFGKDNYRNEIIVNRKRQSIGTPNKFEVESEYLLFYSKSDNYLRRD LYRKRSLVDFKWTGFLNQGERNPPERTFFGKVLYPPKGQHFSLVQEKVDKLLKEHFLRLKCKKCGAVYYWDEEESKEKFR NKILASKTEAFKYFDIKPETAVFGVTKIDRCLNCGGDDWKVEYLTSDEVKITDNWKDIPSYSDGFKFSTENSEILLKRVI ESTSNEGDLVLDFFLGSGTTTAVAQKLRRKWIGVEMGEHFWSVVLPRMKKVLFYDKSGISKEKDVREKYNEKTAGGFFKY HTLEQYEDALENVEFGEVQRVLYDFTDYFVRYMLEWETKHSKTFLDIDELVDPFSYRLRIMENYRQKVVNADLVETFNYL LGLNVAKYRFLEENGRKYVFVFGEKDGKRISIVWRSVVGIDWKKDREVIESNVNGFEPDEIYINGDAAVKGFRPIESLFK SLMFTPQN
Specific function: Unknown
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 116272; Mature: 116140
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSMEGKSDLKEKLKANLREMFQFENADLDFGIYRIMNYRREEIERFIEKDLIEEIENQL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAEELEKEVYNHLITFFSRYYDKGDFISKRRYGRNEKYVVPYNGEEVLLYWANKDQYYV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCEEEEEEECCCEEEE KTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFFVLSEKIADFDEERRELNIYF EEHHHHCCCEEEEEEEEEEEEEEEECCCCCCCCCCCHHEEEEHHHHHCCHHCCCEEEEEE EYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPNSQKGRSYIERHL EECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH YNYTRRNTTDYFIHRDLRGFLERELDFYIKNEFLQLEDLQVLEESKYFERLRLYLAGMRV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRRIALKIIDFLAQIENFQKRLWEKKKFVVDTHYVITLDRIKEYAGEEFLESILDEILSN HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHCC ERQREEWRELFGIEVKGKGDLLSGHTLEGKEWKKLPIDTRHFSESFKWKLVDALTRENDL HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH DEILDGVLIKSENFHALNLLLSKYYEKVQTIYIDPPFNKEQEADFLYKVGYKDATWITML HHHHCCEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHEEECCCCCHHHHHH ENRIRLGRELLNERGSIFVRCDYNGNAYLKLLLNEIFGKDNYRNEIIVNRKRQSIGTPNK HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCC FEVESEYLLFYSKSDNYLRRDLYRKRSLVDFKWTGFLNQGERNPPERTFFGKVLYPPKGQ EEECCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECEEECCCCCC HFSLVQEKVDKLLKEHFLRLKCKKCGAVYYWDEEESKEKFRNKILASKTEAFKYFDIKPE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCC TAVFGVTKIDRCLNCGGDDWKVEYLTSDEVKITDNWKDIPSYSDGFKFSTENSEILLKRV CCEECHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCEECCCCHHHHHHHH IESTSNEGDLVLDFFLGSGTTTAVAQKLRRKWIGVEMGEHFWSVVLPRMKKVLFYDKSGI HHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC SKEKDVREKYNEKTAGGFFKYHTLEQYEDALENVEFGEVQRVLYDFTDYFVRYMLEWETK CCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC HSKTFLDIDELVDPFSYRLRIMENYRQKVVNADLVETFNYLLGLNVAKYRFLEENGRKYV CCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCEEE FVFGEKDGKRISIVWRSVVGIDWKKDREVIESNVNGFEPDEIYINGDAAVKGFRPIESLF EEEECCCCCEEEEEEHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHH KSLMFTPQN HHHCCCCCC >Mature Secondary Structure GSMEGKSDLKEKLKANLREMFQFENADLDFGIYRIMNYRREEIERFIEKDLIEEIENQL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAEELEKEVYNHLITFFSRYYDKGDFISKRRYGRNEKYVVPYNGEEVLLYWANKDQYYV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCEEEEEEECCCEEEE KTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFFVLSEKIADFDEERRELNIYF EEHHHHCCCEEEEEEEEEEEEEEEECCCCCCCCCCCHHEEEEHHHHHCCHHCCCEEEEEE EYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPNSQKGRSYIERHL EECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH YNYTRRNTTDYFIHRDLRGFLERELDFYIKNEFLQLEDLQVLEESKYFERLRLYLAGMRV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRRIALKIIDFLAQIENFQKRLWEKKKFVVDTHYVITLDRIKEYAGEEFLESILDEILSN HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHCC ERQREEWRELFGIEVKGKGDLLSGHTLEGKEWKKLPIDTRHFSESFKWKLVDALTRENDL HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH DEILDGVLIKSENFHALNLLLSKYYEKVQTIYIDPPFNKEQEADFLYKVGYKDATWITML HHHHCCEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHEEECCCCCHHHHHH ENRIRLGRELLNERGSIFVRCDYNGNAYLKLLLNEIFGKDNYRNEIIVNRKRQSIGTPNK HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCC FEVESEYLLFYSKSDNYLRRDLYRKRSLVDFKWTGFLNQGERNPPERTFFGKVLYPPKGQ EEECCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECEEECCCCCC HFSLVQEKVDKLLKEHFLRLKCKKCGAVYYWDEEESKEKFRNKILASKTEAFKYFDIKPE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCC TAVFGVTKIDRCLNCGGDDWKVEYLTSDEVKITDNWKDIPSYSDGFKFSTENSEILLKRV CCEECHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCEECCCCHHHHHHHH IESTSNEGDLVLDFFLGSGTTTAVAQKLRRKWIGVEMGEHFWSVVLPRMKKVLFYDKSGI HHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC SKEKDVREKYNEKTAGGFFKYHTLEQYEDALENVEFGEVQRVLYDFTDYFVRYMLEWETK CCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC HSKTFLDIDELVDPFSYRLRIMENYRQKVVNADLVETFNYLLGLNVAKYRFLEENGRKYV CCCEEEEHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCEEE FVFGEKDGKRISIVWRSVVGIDWKKDREVIESNVNGFEPDEIYINGDAAVKGFRPIESLF EEEECCCCCEEEEEEHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHH KSLMFTPQN HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]