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Identifier: 11498979

GI number: 11498979

Start: 1234736

End: 1235635

Strand: Reverse

Name: Not Available

Synonym: AF1383

Alternate gene names: 11498979

Gene position: 1235635-1234736 (Counterclockwise)

Preceding gene: 11498981

Following gene: 11498978

Centisome position: 56.72

GC content: 43.56

Gene sequence:

>900_bases
GTGAGAAAACTAACGAACAAAAAGATCAGGTGGATAATCAGACAGCTTGACAAGGGAGCTCCAGTAAAGGAAATAGCCGC
TGTGATGAGAGTTACACCAAGAAGAATCTACCAGCTTAAAAAACAATATGAGGAAACTGGCCAGATTCCAGAACTCAAAC
AAGCAGGAAGAAAGCCCAAACCAATTGACGAAAAGACAGAGCAAATAATCCTGCAGGCCTACAAAAAATACAGACTCAGC
CCAGTACCATTGGAAAGGCTGATAGAAAGGGATTACGGCATCCACATCTCCCATAATACAATCTACAAAGTTTTACTCAA
ACACGGTTTGGTGGAGGAGAACATGAGCAAGAAGAAACGAAGGAAATGGGTTAGATACGAAAGAACCCACTCAATGTCTT
TATGGCAGGGAGACTGGAAGAGGCTTGGAGAGAAATGGATTATAGCCTTCATGGATGATGCTTCCCGCTTTATTACTTGT
TACGGAGTCTTCGATTCAGCTACGACTGAGAACACGATTAGAGTCCTGAAAGTGGGATTCAGGGAGTATGGCATTCCGGA
TGAGATCCTCACAGATCACGGAACTCAGTTTGTTGCAGCTAAAAGCAGAGAGAAGGCCAAGCATAGATTCAGGGAGTTTT
TGGCCGAGAATGGAGTAAGGCATGTTCTTGCCAGAATAAACCATCCACAAACGAATGGAAAGATAGAGAGGTTCTTTGGT
TTGATGGAGCAGAAGATCCATCTGTTTGATTCTTTGGATGAGTTCATTTATTGGTACAATTACGTTAAGCCTCACATGAG
CCTGAATTTCGACGAATTGGAGACTCCCTATCAGGCCTTTTTGAGGAAGCTACCTGCTGAAAGGGTGTTTGAGTACGGGA
GGTGGTTGTTTGAGGAGTGA

Upstream 100 bases:

>100_bases
CTTTGCCAGATGCGCCGCATTCCTTACCTCTTTAATTTCAGCTTTGGGAATCAGCGATGTAGTATCCCTAAATTATTTCA
CTACTAAACACCCACTTCAT

Downstream 100 bases:

>100_bases
AATTAATTCGGGATATCACAGTTGTTGCTTTTTTGGATTATGGGTTTAAAAACCTCAGACGCAGACAAATTGGATTGCGA
TTTTTTAGGAAGTAAAGTTT

Product: ISA0963-4 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRKLTNKKIRWIIRQLDKGAPVKEIAAVMRVTPRRIYQLKKQYEETGQIPELKQAGRKPKPIDEKTEQIILQAYKKYRLS
PVPLERLIERDYGIHISHNTIYKVLLKHGLVEENMSKKKRRKWVRYERTHSMSLWQGDWKRLGEKWIIAFMDDASRFITC
YGVFDSATTENTIRVLKVGFREYGIPDEILTDHGTQFVAAKSREKAKHRFREFLAENGVRHVLARINHPQTNGKIERFFG
LMEQKIHLFDSLDEFIYWYNYVKPHMSLNFDELETPYQAFLRKLPAERVFEYGRWLFEE

Sequences:

>Translated_299_residues
MRKLTNKKIRWIIRQLDKGAPVKEIAAVMRVTPRRIYQLKKQYEETGQIPELKQAGRKPKPIDEKTEQIILQAYKKYRLS
PVPLERLIERDYGIHISHNTIYKVLLKHGLVEENMSKKKRRKWVRYERTHSMSLWQGDWKRLGEKWIIAFMDDASRFITC
YGVFDSATTENTIRVLKVGFREYGIPDEILTDHGTQFVAAKSREKAKHRFREFLAENGVRHVLARINHPQTNGKIERFFG
LMEQKIHLFDSLDEFIYWYNYVKPHMSLNFDELETPYQAFLRKLPAERVFEYGRWLFEE
>Mature_299_residues
MRKLTNKKIRWIIRQLDKGAPVKEIAAVMRVTPRRIYQLKKQYEETGQIPELKQAGRKPKPIDEKTEQIILQAYKKYRLS
PVPLERLIERDYGIHISHNTIYKVLLKHGLVEENMSKKKRRKWVRYERTHSMSLWQGDWKRLGEKWIIAFMDDASRFITC
YGVFDSATTENTIRVLKVGFREYGIPDEILTDHGTQFVAAKSREKAKHRFREFLAENGVRHVLARINHPQTNGKIERFFG
LMEQKIHLFDSLDEFIYWYNYVKPHMSLNFDELETPYQAFLRKLPAERVFEYGRWLFEE

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35865; Mature: 35865

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTNKKIRWIIRQLDKGAPVKEIAAVMRVTPRRIYQLKKQYEETGQIPELKQAGRKPK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCCCC
PIDEKTEQIILQAYKKYRLSPVPLERLIERDYGIHISHNTIYKVLLKHGLVEENMSKKKR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHCCHHHHHHHHHH
RKWVRYERTHSMSLWQGDWKRLGEKWIIAFMDDASRFITCYGVFDSATTENTIRVLKVGF
HHHHHHHHHCCCHHHHHHHHHCCHHHEEHEECCCCCEEEEEECCCCCCCHHHHHHHHHHH
REYGIPDEILTDHGTQFVAAKSREKAKHRFREFLAENGVRHVLARINHPQTNGKIERFFG
HHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
LMEQKIHLFDSLDEFIYWYNYVKPHMSLNFDELETPYQAFLRKLPAERVFEYGRWLFEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKLTNKKIRWIIRQLDKGAPVKEIAAVMRVTPRRIYQLKKQYEETGQIPELKQAGRKPK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCCCC
PIDEKTEQIILQAYKKYRLSPVPLERLIERDYGIHISHNTIYKVLLKHGLVEENMSKKKR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHCCHHHHHHHHHH
RKWVRYERTHSMSLWQGDWKRLGEKWIIAFMDDASRFITCYGVFDSATTENTIRVLKVGF
HHHHHHHHHCCCHHHHHHHHHCCHHHEEHEECCCCCEEEEEECCCCCCCHHHHHHHHHHH
REYGIPDEILTDHGTQFVAAKSREKAKHRFREFLAENGVRHVLARINHPQTNGKIERFFG
HHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
LMEQKIHLFDSLDEFIYWYNYVKPHMSLNFDELETPYQAFLRKLPAERVFEYGRWLFEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]