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Identifier: 11498885

GI number: 11498885

Start: 1145872

End: 1146441

Strand: Reverse

Name: Not Available

Synonym: AF1286

Alternate gene names: NA

Gene position: 1146441-1145872 (Counterclockwise)

Preceding gene: 11498886

Following gene: 11498884

Centisome position: 52.63

GC content: 49.12

Gene sequence:

>570_bases
ATGGTTTACTGCGAAGAGCTGAAAAACGCCTTCTGCTACATCGGAGCTGGGGGGCATCATGCAGGCAGAGATTACTTTTG
GGGATACTGCTGCTTCAACGACGTGGTTCTGGCGATTCAAAACCTCTACGACAAGTTTGGTGAGCTCAGGGTTGCCATCA
TAGACACCGACGCGCATCATGGCGATGGAACGAGAGAGCTTATTGAGCTCAATGATTTCAAAGCGCTGCACTTCTGCATT
TGCGACAGAGATTACGTATCGGAAGACGGGCTAAAAATCGACGTCAGCTACTTTACCCACTCTTACAGAGATGCTGTTGA
AATGTTCTGCGATCAGGCTAAGAACTTCAATCCGGACATCCTTTTCTGGTACTTCGGCCATGACACGCACGTCGGGGATT
ACGGAGATATCGGTCTGAAAGTTAGGGACTACAGGGAGATAGCAGTAAAGATTAAACAGCTGGCAGAAGAGATTTGCAAC
GGAAAGCTTGTTGTGGTTCTCGGGGGTGGAAGCATTCCGGAGATAGCCAGAAGTTCAACGCTGACGGTTATACGCGTCTT
GCTGGAGTGA

Upstream 100 bases:

>100_bases
TTTTGAAAATACACACCAAAGAGCACCTTGAAGGGGTGAAAAAGGACCCTCTCTGCTCGACAGCCTGGCACTCCGCAGGG
GAGTTGTTAGGGCAGCGGAG

Downstream 100 bases:

>100_bases
CGATAAAAAGACATATTAAGCAGAGGAGCAAATATTGTGTGAATGGCAAAGAGGGAAACGGCTGAGTTGAGATACCTGAT
AGTTCGTCCTTTGGGCTACC

Product: acetoin utilization protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVYCEELKNAFCYIGAGGHHAGRDYFWGYCCFNDVVLAIQNLYDKFGELRVAIIDTDAHHGDGTRELIELNDFKALHFCI
CDRDYVSEDGLKIDVSYFTHSYRDAVEMFCDQAKNFNPDILFWYFGHDTHVGDYGDIGLKVRDYREIAVKIKQLAEEICN
GKLVVVLGGGSIPEIARSSTLTVIRVLLE

Sequences:

>Translated_189_residues
MVYCEELKNAFCYIGAGGHHAGRDYFWGYCCFNDVVLAIQNLYDKFGELRVAIIDTDAHHGDGTRELIELNDFKALHFCI
CDRDYVSEDGLKIDVSYFTHSYRDAVEMFCDQAKNFNPDILFWYFGHDTHVGDYGDIGLKVRDYREIAVKIKQLAEEICN
GKLVVVLGGGSIPEIARSSTLTVIRVLLE
>Mature_189_residues
MVYCEELKNAFCYIGAGGHHAGRDYFWGYCCFNDVVLAIQNLYDKFGELRVAIIDTDAHHGDGTRELIELNDFKALHFCI
CDRDYVSEDGLKIDVSYFTHSYRDAVEMFCDQAKNFNPDILFWYFGHDTHVGDYGDIGLKVRDYREIAVKIKQLAEEICN
GKLVVVLGGGSIPEIARSSTLTVIRVLLE

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25154020, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25154022, Length=204, Percent_Identity=28.4313725490196, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286
- InterPro:   IPR003084 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 21494; Mature: 21494

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYCEELKNAFCYIGAGGHHAGRDYFWGYCCFNDVVLAIQNLYDKFGELRVAIIDTDAHH
CEEHHHHCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
GDGTRELIELNDFKALHFCICDRDYVSEDGLKIDVSYFTHSYRDAVEMFCDQAKNFNPDI
CCCCHHEEEECCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCE
LFWYFGHDTHVGDYGDIGLKVRDYREIAVKIKQLAEEICNGKLVVVLGGGSIPEIARSST
EEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCHH
LTVIRVLLE
HHHHHHHCC
>Mature Secondary Structure
MVYCEELKNAFCYIGAGGHHAGRDYFWGYCCFNDVVLAIQNLYDKFGELRVAIIDTDAHH
CEEHHHHCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
GDGTRELIELNDFKALHFCICDRDYVSEDGLKIDVSYFTHSYRDAVEMFCDQAKNFNPDI
CCCCHHEEEECCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCE
LFWYFGHDTHVGDYGDIGLKVRDYREIAVKIKQLAEEICNGKLVVVLGGGSIPEIARSST
EEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCHH
LTVIRVLLE
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]