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The map label for this gene is pad1

Identifier: 11498813

GI number: 11498813

Start: 1085035

End: 1085583

Strand: Reverse

Name: pad1

Synonym: AF1214

Alternate gene names: 11498813

Gene position: 1085583-1085035 (Counterclockwise)

Preceding gene: 11498814

Following gene: 11498809

Centisome position: 49.83

GC content: 52.46

Gene sequence:

>549_bases
ATGAGGTTCGTAGTAGCCTTAACGGGAGCATCGGGGCAGATACTCGGAATAAGGCTTATTGAGAAGTTGACCGAGTTGGG
GGCGGAGGTTTACGCCGTAGCGTCGAGAGCAGCGAAAATCACACTGAAGGCGGAAACTGACTACGACGAGGGCTACGTGA
GGGAGATTGCAACCAAGTATTATGATGAAGACGAGATTGCCGCACCCTTCGCCAGCGGGAGCTTCAGGCACGATGGAATG
GCTGTTGTGCCTTGCAGCATAAAAACAGCCTCATCAATTGCCTACGGCATTGCAGACAACCTGATAGCGAGAGCTGCGGA
TGTAACCTTGAAGGAGAAAAGGCGACTTGTTCTTGCCATCAGAGAAGCTCCGCTACATTCAGGGCACCTCAAAACGCTTG
CAAGGCTGGCGGAGATGGGGGCAGTAATTTTCCCCCCAGTTCTGTCCTTCTACACAAGGCCGAAGAGTGTTGATGACCTC
ATAGAACACACCGTTTCGAGAATAGCCGAACAGCTTGGGGTTGAGGTGGACTACAGAAGGTGGGGGTAA

Upstream 100 bases:

>100_bases
GGCTCGCTGCTGAGGCGAAGGAGGAGGCTGAGGAAGCGGAGAAGATGAGGATGACCAAGACAATAGAGCTTTTCGATGAA
GATATAGAGCCGCTGATTTG

Downstream 100 bases:

>100_bases
AGTTCCGATGGGGCAAAGCTGGGAAATCTGGTTTTCAATCAAATCTGACCATATCTTTGTCGCACAGCATGTCCAGCAAA
AACCTGAGAAGTTCGTGATA

Product: phenylacrylic acid decarboxylase (pad1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKYYDEDEIAAPFASGSFRHDGM
AVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAIREAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDL
IEHTVSRIAEQLGVEVDYRRWG

Sequences:

>Translated_182_residues
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKYYDEDEIAAPFASGSFRHDGM
AVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAIREAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDL
IEHTVSRIAEQLGVEVDYRRWG
>Mature_182_residues
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKYYDEDEIAAPFASGSFRHDGM
AVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAIREAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDL
IEHTVSRIAEQLGVEVDYRRWG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family

Homologues:

Organism=Escherichia coli, GI1788650, Length=184, Percent_Identity=46.7391304347826, Blast_Score=173, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6320746, Length=181, Percent_Identity=49.171270718232, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAAD_ARCFU (O29054)

Other databases:

- EMBL:   AE000782
- PIR:   E69401
- RefSeq:   NP_070042.1
- ProteinModelPortal:   O29054
- SMR:   O29054
- GeneID:   1484438
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1214
- NMPDR:   fig|224325.1.peg.1202
- TIGR:   AF_1214
- HOGENOM:   HBG297290
- OMA:   IFPPMPM
- ProtClustDB:   CLSK2746802
- BioCyc:   AFUL224325:AF_1214-MONOMER
- InterPro:   IPR003382
- InterPro:   IPR004507
- Gene3D:   G3DSA:3.40.50.1950
- TIGRFAMs:   TIGR00421

Pfam domain/function: PF02441 Flavoprotein; SSF52507 Flavoprotein

EC number: 4.1.1.-

Molecular weight: Translated: 19968; Mature: 19968

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: BINDING 35-35 BINDING 121-121

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKY
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHH
YDEDEIAAPFASGSFRHDGMAVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAI
CCCCHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
REAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDLIEHTVSRIAEQLGVEVDYRR
ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WG
CC
>Mature Secondary Structure
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKY
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHH
YDEDEIAAPFASGSFRHDGMAVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAI
CCCCHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
REAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDLIEHTVSRIAEQLGVEVDYRR
ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475