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The map label for this gene is rps17E

Identifier: 11498516

GI number: 11498516

Start: 814915

End: 815112

Strand: Reverse

Name: rps17E

Synonym: AF0911

Alternate gene names: 11498516

Gene position: 815112-814915 (Counterclockwise)

Preceding gene: 11498517

Following gene: 11498515

Centisome position: 37.42

GC content: 50.0

Gene sequence:

>198_bases
ATGGGCACGGTAAAACCCGCTTACATCAAGGTCATCGCGAGGGAATTGTTGAAGAAGTATCCGGAAGTGTTTACGGGCAA
CTTCGACGAGAACAAGAGGCTCGTGGCGGAGCTTACCAACATCCAGAGCAAGACCGTGAGAAACAGGGTTGCTGGATACA
TCACGAGGAGAGTTAACAGAGGGTTGGTCAATGTTTGA

Upstream 100 bases:

>100_bases
AGCAGGTTTTCTTGCCACGTACTCTGCCGGAAGGATTATGATGAGAAAGCTGTCCGCGAGAGGAGGCAAACGTTAAATAT
TGTATGGTTGGCATCACGCC

Downstream 100 bases:

>100_bases
GGGCGTGATTCCCGCAATGGTAACGCCCTTCAAGGAGGACTTCAGCGTTGACTACGAGGGGATAGCGAAGAATCTCGACT
ACCTTGAGAAGCACGTCAAC

Product: SSU ribosomal protein S17E (rps17E)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MGTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNRGLVNV

Sequences:

>Translated_65_residues
MGTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNRGLVNV
>Mature_64_residues
GTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNRGLVNV

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_ARCFU (O29351)

Other databases:

- EMBL:   AE000782
- PIR:   G69363
- RefSeq:   NP_069744.1
- ProteinModelPortal:   O29351
- SMR:   O29351
- GeneID:   1484134
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0911
- NMPDR:   fig|224325.1.peg.903
- TIGR:   AF_0911
- HOGENOM:   HBG460442
- OMA:   TRDFEHN
- ProtClustDB:   CLSK2746658
- BioCyc:   AFUL224325:AF_0911-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 7450; Mature: 7319

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVNV
CCCCC
>Mature Secondary Structure 
GTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVNV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475