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Identifier: 11498510

GI number: 11498510

Start: 809294

End: 809668

Strand: Reverse

Name: Not Available

Synonym: AF0905

Alternate gene names: NA

Gene position: 809668-809294 (Counterclockwise)

Preceding gene: 11498511

Following gene: 11498503

Centisome position: 37.17

GC content: 44.27

Gene sequence:

>375_bases
ATGGAGGATTATAAGCCATTTTTTGAAGCCATTGACGAACTGAAGGAGAAATCGGAGAACGGCTGGGTTGTGGTGGTGGA
GGGGAAAAAGGACGTCAGGTCTCTGAGGGCGATAGGGGTGAGCGGTGAGATTGTTGTGTTTACGGGCTACGCATCAACCG
CCGACACTTTAAAGGACAGAAAAGTCATAATTCTGACAGATTCGGATGCAAAAGGAATGGAGATAGAAAAGGGCCTCGTA
GAAGCTCTGAAAACTTACGGAAAGATTCCGGACGTTGAGATTAAGAGAAAGATTTTCAGCAACGTAAGAAAGGAAATTTC
GAAGGTCGAGGAGATTTCGGCTTTTTACGAGAAAATAAGTGGAATTGAACTCTAA

Upstream 100 bases:

>100_bases
GTCAGGACTGTTTACTTCAACTCCTTCACCGTCGTCAGAGGAGGGATGAAAAGGGGTGTTATCGCGGACGTTATCGTTCA
GATAGAGCCGGGAATCAGGT

Downstream 100 bases:

>100_bases
TATCCCGGATCGAAGGGCAGAAGGGCGAAAACCTTTGCGTCCTCAACCATGTTGTCTATTACGCAGTACTCGTTTGCCTG
GTGAGCGACACCGTCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MEDYKPFFEAIDELKEKSENGWVVVVEGKKDVRSLRAIGVSGEIVVFTGYASTADTLKDRKVIILTDSDAKGMEIEKGLV
EALKTYGKIPDVEIKRKIFSNVRKEISKVEEISAFYEKISGIEL

Sequences:

>Translated_124_residues
MEDYKPFFEAIDELKEKSENGWVVVVEGKKDVRSLRAIGVSGEIVVFTGYASTADTLKDRKVIILTDSDAKGMEIEKGLV
EALKTYGKIPDVEIKRKIFSNVRKEISKVEEISAFYEKISGIEL
>Mature_124_residues
MEDYKPFFEAIDELKEKSENGWVVVVEGKKDVRSLRAIGVSGEIVVFTGYASTADTLKDRKVIILTDSDAKGMEIEKGLV
EALKTYGKIPDVEIKRKIFSNVRKEISKVEEISAFYEKISGIEL

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y905_ARCFU (O29357)

Other databases:

- EMBL:   AE000782
- PIR:   A69363
- RefSeq:   NP_069738.1
- ProteinModelPortal:   O29357
- SMR:   O29357
- GeneID:   1484128
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0905
- NMPDR:   fig|224325.1.peg.897
- TIGR:   AF_0905
- HOGENOM:   HBG726878
- OMA:   KEKSENG
- ProtClustDB:   PRK04017
- BioCyc:   AFUL224325:AF_0905-MONOMER
- HAMAP:   MF_01095
- InterPro:   IPR006171
- InterPro:   IPR022972
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 13948; Mature: 13948

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDYKPFFEAIDELKEKSENGWVVVVEGKKDVRSLRAIGVSGEIVVFTGYASTADTLKDR
CCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCHHHHCCC
KVIILTDSDAKGMEIEKGLVEALKTYGKIPDVEIKRKIFSNVRKEISKVEEISAFYEKIS
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIEL
CCCC
>Mature Secondary Structure
MEDYKPFFEAIDELKEKSENGWVVVVEGKKDVRSLRAIGVSGEIVVFTGYASTADTLKDR
CCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCHHHHCCC
KVIILTDSDAKGMEIEKGLVEALKTYGKIPDVEIKRKIFSNVRKEISKVEEISAFYEKIS
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIEL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475