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The map label for this gene is rr1

Identifier: 11498438

GI number: 11498438

Start: 740238

End: 740804

Strand: Reverse

Name: rr1

Synonym: AF0832

Alternate gene names: NA

Gene position: 740804-740238 (Counterclockwise)

Preceding gene: 11498439

Following gene: 11498437

Centisome position: 34.01

GC content: 50.26

Gene sequence:

>567_bases
ATGGAGACGCCCAAGAACCTCCTGAAGGGCTACATCGGAGAGAGCCTGGCCATAAGCAGGTACCAGATTTACTCAAGCAT
TGCTGAGGCCGAGAAGTTCATCTATGTGGCGAAGTACTTCCGAGAGGTAATTGAGAATGAGAAGAAGCACGCTGAAATCT
TCGCCAACCTGATAAAGAAGCTCGATATCGAGCCGTCTGAGGTTGAGGTGAAGGCTCCGATAAAGTTTGGAACCACCGCT
GAGAACCTCAGGTATGCGGTTGAGGGTGAGAAGTGGGAGGCCGAGGAGTTCTACCCATCAACCGCAGAGGTTGCAGAAAA
AGAGGGTTTTAAAGAGGTTGCAGAGAGGTTTAGGGCTCTAACCAAAGTTGAATTCTCACATCAGAGAAAGTTTGCCAAGC
TCTTGGAGCTGATTGAGAATGACCAGATGTTTAAGAGGGACGAAGAGGTTGAGTGGATGTGCCTCGTTTGCGGCTACACC
GAAAAAGGGAAGGAGCCGCCAAAGGTCTGCCCCAACTGCGGGGCGATGTACTACCACTTCGTCTCGAAGGACATTCTGGC
TTATTAG

Upstream 100 bases:

>100_bases
CCGGGGGACGAGCCAAAGGCGGAGTTCACGGTGATGTCAGACAGGGTCTCTGCCAGAGCTTACTGCAACATCCACGGCCT
CTGGCAGAGCGGGTGAAAGC

Downstream 100 bases:

>100_bases
GAGGTGAAAGTATGGGAACGCTTGAAAATCTTGTTAAGGCCTTCATTGGAGAGAGCATGGCGAGGAACCGCTACACCTTC
TACGCCAAAGTTGCGAAGGA

Product: rubrerythrin (rr1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
METPKNLLKGYIGESLAISRYQIYSSIAEAEKFIYVAKYFREVIENEKKHAEIFANLIKKLDIEPSEVEVKAPIKFGTTA
ENLRYAVEGEKWEAEEFYPSTAEVAEKEGFKEVAERFRALTKVEFSHQRKFAKLLELIENDQMFKRDEEVEWMCLVCGYT
EKGKEPPKVCPNCGAMYYHFVSKDILAY

Sequences:

>Translated_188_residues
METPKNLLKGYIGESLAISRYQIYSSIAEAEKFIYVAKYFREVIENEKKHAEIFANLIKKLDIEPSEVEVKAPIKFGTTA
ENLRYAVEGEKWEAEEFYPSTAEVAEKEGFKEVAERFRALTKVEFSHQRKFAKLLELIENDQMFKRDEEVEWMCLVCGYT
EKGKEPPKVCPNCGAMYYHFVSKDILAY
>Mature_188_residues
METPKNLLKGYIGESLAISRYQIYSSIAEAEKFIYVAKYFREVIENEKKHAEIFANLIKKLDIEPSEVEVKAPIKFGTTA
ENLRYAVEGEKWEAEEFYPSTAEVAEKEGFKEVAERFRALTKVEFSHQRKFAKLLELIENDQMFKRDEEVEWMCLVCGYT
EKGKEPPKVCPNCGAMYYHFVSKDILAY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 21894; Mature: 21894

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPKNLLKGYIGESLAISRYQIYSSIAEAEKFIYVAKYFREVIENEKKHAEIFANLIKK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LDIEPSEVEVKAPIKFGTTAENLRYAVEGEKWEAEEFYPSTAEVAEKEGFKEVAERFRAL
HCCCCCCEEEECCCEECCCHHHHEEEECCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHH
TKVEFSHQRKFAKLLELIENDQMFKRDEEVEWMCLVCGYTEKGKEPPKVCPNCGAMYYHF
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCHHCCCCCCCCCCCCHHHHHHH
VSKDILAY
HHHHHHCC
>Mature Secondary Structure
METPKNLLKGYIGESLAISRYQIYSSIAEAEKFIYVAKYFREVIENEKKHAEIFANLIKK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LDIEPSEVEVKAPIKFGTTAENLRYAVEGEKWEAEEFYPSTAEVAEKEGFKEVAERFRAL
HCCCCCCEEEECCCEECCCHHHHEEEECCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHH
TKVEFSHQRKFAKLLELIENDQMFKRDEEVEWMCLVCGYTEKGKEPPKVCPNCGAMYYHF
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCHHCCCCCCCCCCCCHHHHHHH
VSKDILAY
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]