| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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The map label for this gene is hemV-2
Identifier: 11498044
GI number: 11498044
Start: 388992
End: 390092
Strand: Reverse
Name: hemV-2
Synonym: AF0432
Alternate gene names: NA
Gene position: 390092-388992 (Counterclockwise)
Preceding gene: 11498045
Following gene: 11498043
Centisome position: 17.91
GC content: 51.32
Gene sequence:
>1101_bases ATGAGGAAGGTTTCGCTCCTTGCTCTGGCTCTGGCGATTCTGATTGCCGGCTGTGCTCAGCAGCCTGCTCAAGTTAAGGA GGGCGGGAAGGTTACGGTTACGGACATGCTCGGCAGAACAGTTGAGGTTCCTGAAAAAGTTGAGAGGGTTGTTGCAATTG GCCCCGGAGCTTTGAGGCTGGTCGTTTACCTCAACGCATCCGACAAGGTCGTAGGAGTGGAGGATGCAGAGACCAACTGG CCTGAAATGGGAAGACCTTACAGAATGGCCCATCCCGAATTTGCCAATCTGCCGACTATAGGCAAAGGTGGCCCGAATCC GTCACCGAATGCTGAGGCCATCGTTGCGGTGAAGCCGGACGTCATCTTCGCCTGCTACATTGATGCAACGCAGGCAGACA CTCTGCAGCAGCAAACAGGAGTGCCGGTTGTTGTGCTCAGCTACGGAGAGCTTGGAAACTTCAGGGCTGAGGAAATCTAC ACCTCTCTAAGGCTTGCAGGGAAAATCCTTGGCAGGGAGGAGAGGGCTAAGGAGATAATAAGCTTCATCGAAAACGCTTA CAAAGATTTAACGGGAAGAGTTGAGGGGGTTCCTGAGGAAAACAAGCTATCAGTTTACGTTGGAGCGCTCGGTTTCAAGG GAGGTCACGGCATAGAATCAACGCAGTGCAACTTCCCTCCGTTCATGGTTGTCAGGGCAAAGAACGTTGCCTGCGAGGCG AACGTGAGCGGGGCTTTCTTCATCGACAAGGAAAAGCTGCTTGAGTGGGATCCGGACATCATATTTCTCGACGAGAACAA CCTCCACCTTGTCCTTAACGACTACGAGAAGAATCCCGAAATCTACCAGTCACTCAAAGCCTTTAAGAACGGGAAAATCT ACGGAATTCTGCCCTTCAACTACTACACCACCAACATAGAAACTGCAATTGCCGACTCCTACTTCATCGGCAAGGTTCTC TATCCCGATAAGTTTGCAGACATCGACCCCGGAAAGAAGGCGGACAAAATCTTCGAGTTCCTCGTTGGCAAAAAGCTTTA CGAGCAGATGGCAGAGCACTACGGCGGTTTCAAGAACATTGCAGACGTGTTCGAGAAATGA
Upstream 100 bases:
>100_bases CGTTAAGGATGGTCTCTGCTTGAGGTGTGCGGGCAGCTACTACGCCGTTGTTGGTAGGGGGATTGTGAAGTTCGATGGAG AGATGAGGGAGGTGGTCTGA
Downstream 100 bases:
>100_bases CCGAATACAGAAGGAGAATAAGAGTTGCTGAACTGCTGCTCCTGAGCTTGCTAATTTTTTCAGTTACTGCATCCCTTCTC GCAGGCTCATACAGCCTTTC
Product: iron (III) ABC transporter, ATP-binding protein (hemV-2)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MRKVSLLALALAILIAGCAQQPAQVKEGGKVTVTDMLGRTVEVPEKVERVVAIGPGALRLVVYLNASDKVVGVEDAETNW PEMGRPYRMAHPEFANLPTIGKGGPNPSPNAEAIVAVKPDVIFACYIDATQADTLQQQTGVPVVVLSYGELGNFRAEEIY TSLRLAGKILGREERAKEIISFIENAYKDLTGRVEGVPEENKLSVYVGALGFKGGHGIESTQCNFPPFMVVRAKNVACEA NVSGAFFIDKEKLLEWDPDIIFLDENNLHLVLNDYEKNPEIYQSLKAFKNGKIYGILPFNYYTTNIETAIADSYFIGKVL YPDKFADIDPGKKADKIFEFLVGKKLYEQMAEHYGGFKNIADVFEK
Sequences:
>Translated_366_residues MRKVSLLALALAILIAGCAQQPAQVKEGGKVTVTDMLGRTVEVPEKVERVVAIGPGALRLVVYLNASDKVVGVEDAETNW PEMGRPYRMAHPEFANLPTIGKGGPNPSPNAEAIVAVKPDVIFACYIDATQADTLQQQTGVPVVVLSYGELGNFRAEEIY TSLRLAGKILGREERAKEIISFIENAYKDLTGRVEGVPEENKLSVYVGALGFKGGHGIESTQCNFPPFMVVRAKNVACEA NVSGAFFIDKEKLLEWDPDIIFLDENNLHLVLNDYEKNPEIYQSLKAFKNGKIYGILPFNYYTTNIETAIADSYFIGKVL YPDKFADIDPGKKADKIFEFLVGKKLYEQMAEHYGGFKNIADVFEK >Mature_366_residues MRKVSLLALALAILIAGCAQQPAQVKEGGKVTVTDMLGRTVEVPEKVERVVAIGPGALRLVVYLNASDKVVGVEDAETNW PEMGRPYRMAHPEFANLPTIGKGGPNPSPNAEAIVAVKPDVIFACYIDATQADTLQQQTGVPVVVLSYGELGNFRAEEIY TSLRLAGKILGREERAKEIISFIENAYKDLTGRVEGVPEENKLSVYVGALGFKGGHGIESTQCNFPPFMVVRAKNVACEA NVSGAFFIDKEKLLEWDPDIIFLDENNLHLVLNDYEKNPEIYQSLKAFKNGKIYGILPFNYYTTNIETAIADSYFIGKVL YPDKFADIDPGKKADKIFEFLVGKKLYEQMAEHYGGFKNIADVFEK
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 40382; Mature: 40382
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVSLLALALAILIAGCAQQPAQVKEGGKVTVTDMLGRTVEVPEKVERVVAIGPGALRL CCHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEHHHCCCCCCCHHHHHHEEEECCCEEEE VVYLNASDKVVGVEDAETNWPEMGRPYRMAHPEFANLPTIGKGGPNPSPNAEAIVAVKPD EEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC VIFACYIDATQADTLQQQTGVPVVVLSYGELGNFRAEEIYTSLRLAGKILGREERAKEII EEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH SFIENAYKDLTGRVEGVPEENKLSVYVGALGFKGGHGIESTQCNFPPFMVVRAKNVACEA HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEC NVSGAFFIDKEKLLEWDPDIIFLDENNLHLVLNDYEKNPEIYQSLKAFKNGKIYGILPFN CCCEEEEEEHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC YYTTNIETAIADSYFIGKVLYPDKFADIDPGKKADKIFEFLVGKKLYEQMAEHYGGFKNI EEECCCHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADVFEK HHHHCC >Mature Secondary Structure MRKVSLLALALAILIAGCAQQPAQVKEGGKVTVTDMLGRTVEVPEKVERVVAIGPGALRL CCHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEHHHCCCCCCCHHHHHHEEEECCCEEEE VVYLNASDKVVGVEDAETNWPEMGRPYRMAHPEFANLPTIGKGGPNPSPNAEAIVAVKPD EEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC VIFACYIDATQADTLQQQTGVPVVVLSYGELGNFRAEEIYTSLRLAGKILGREERAKEII EEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH SFIENAYKDLTGRVEGVPEENKLSVYVGALGFKGGHGIESTQCNFPPFMVVRAKNVACEA HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEC NVSGAFFIDKEKLLEWDPDIIFLDENNLHLVLNDYEKNPEIYQSLKAFKNGKIYGILPFN CCCEEEEEEHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC YYTTNIETAIADSYFIGKVLYPDKFADIDPGKKADKIFEFLVGKKLYEQMAEHYGGFKNI EEECCCHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADVFEK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]