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Identifier: 11497913

GI number: 11497913

Start: 273717

End: 274094

Strand: Reverse

Name: Not Available

Synonym: AF0298

Alternate gene names: NA

Gene position: 274094-273717 (Counterclockwise)

Preceding gene: 11497914

Following gene: 11497912

Centisome position: 12.58

GC content: 40.48

Gene sequence:

>378_bases
TTGGATGAACTAGAATTGAGAATCAGAAAAGCTGAGAAGCTTGTTCAAGATGCGAAAAAGGAATTTGAGATGGGGCTTTA
CGAAAGGTGCTGCAGCACAGCATATTATGCGATGTTTCACGCCGCTAAGGCTATGCTTCTCGGTTATGGAAGGGATTCAA
AAACTCACAGAGGAACAATATACCTTATTTGGGAGTGTAGAGAAGAGCTGGGATTAAGTGATGATGATTGTTCAAAGCTG
AGCAGAGCGTTTGATCTGCGGGAGGAAAGTGACTACGGAATATACAAAGAAGTTTCGAAGGATTTGGCTATCAAAATTCT
AAAAGATGCAGAAATTTTTGTGCAGAAAGCCAAAAACGCTGTAAACAAGAACAGATAG

Upstream 100 bases:

>100_bases
AGGTTGATATCTGTGAAGATTATAGACAAAAAAACCTTTGAGAACATGAAAAAAATGGAATTCTCTCTCATTTCTTCCAT
TGAAAAGGAGGGAATAAAGA

Downstream 100 bases:

>100_bases
TTTCAAGGGAGATCTTCAATGGTCCATCCACTTTTTAAAGCTTCTAATATGTCATAAACGGAAATTCTGGTGCCCTTAAT
AACCCATAATGGACGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDELELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAMLLGYGRDSKTHRGTIYLIWECREELGLSDDDCSKL
SRAFDLREESDYGIYKEVSKDLAIKILKDAEIFVQKAKNAVNKNR

Sequences:

>Translated_125_residues
MDELELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAMLLGYGRDSKTHRGTIYLIWECREELGLSDDDCSKL
SRAFDLREESDYGIYKEVSKDLAIKILKDAEIFVQKAKNAVNKNR
>Mature_125_residues
MDELELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAMLLGYGRDSKTHRGTIYLIWECREELGLSDDDCSKL
SRAFDLREESDYGIYKEVSKDLAIKILKDAEIFVQKAKNAVNKNR

Specific function: Unknown

COG id: COG1895

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0332 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y298_ARCFU (O29944)

Other databases:

- EMBL:   AE000782
- PIR:   B69287
- RefSeq:   NP_069135.1
- PDB:   2HSB
- PDBsum:   2HSB
- ProteinModelPortal:   O29944
- SMR:   O29944
- GeneID:   1483513
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0298
- NMPDR:   fig|224325.1.peg.294
- TIGR:   AF_0298
- BioCyc:   AFUL224325:AF_0298-MONOMER
- InterPro:   IPR007842

Pfam domain/function: PF05168 HEPN

EC number: NA

Molecular weight: Translated: 14543; Mature: 14543

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAMLLGYGRDSKTHRGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YLIWECREELGLSDDDCSKLSRAFDLREESDYGIYKEVSKDLAIKILKDAEIFVQKAKNA
EEEEEEHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNKNR
HCCCC
>Mature Secondary Structure
MDELELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAMLLGYGRDSKTHRGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YLIWECREELGLSDDDCSKLSRAFDLREESDYGIYKEVSKDLAIKILKDAEIFVQKAKNA
EEEEEEHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNKNR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475