Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11497898

GI number: 11497898

Start: 260314

End: 260655

Strand: Reverse

Name: Not Available

Synonym: AF0282

Alternate gene names: NA

Gene position: 260655-260314 (Counterclockwise)

Preceding gene: 11497908

Following gene: 11497897

Centisome position: 11.97

GC content: 52.34

Gene sequence:

>342_bases
ATGCCCGATTACCTTGTCGTTCTGCAGGCTGCGTGGATTGTGAGAAAGGCGAGAAGTGTTGAGGACGCGATGAACATAGC
GGTTGCCGAGGCGGGGAAGAAGCTCAACCCTGATTTGGACTTCGTGAAGATCGATGTGGGAGACACAGCCTGTCCAAAGT
GCAACAGCCCGCTGAAGGCCGTGTTTATGGTTGCCGGTGTTGCGTTAGTGGGGCTAATCTTCGAGATGAAGGTTTTTAAC
GCAAAAAGCCCGGAGCATGCGGCCAAAATCGCCAAGTACGAGATCGGAAAGAGAATGCCGCGAATTCCGCTTGAGGTTAT
AGAGGTAGCGGAGATTGAATGA

Upstream 100 bases:

>100_bases
AAAATTTAAGTTTGCTCTGCCAATAGTCCAGAACGACCATTAAAGATTTTGCAGCAAACTATGCAACAGTTTTTAAAATC
GGAGTACCACTACTGGGTGG

Downstream 100 bases:

>100_bases
CAGTGCTTTTGAAGAGCAAATCAATTGCTAACATAATTTTTATATACGTTACTTACTACCATTATTATGGTGTTCAGAAA
ATTGAAGGCTGAGGCGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPDYLVVLQAAWIVRKARSVEDAMNIAVAEAGKKLNPDLDFVKIDVGDTACPKCNSPLKAVFMVAGVALVGLIFEMKVFN
AKSPEHAAKIAKYEIGKRMPRIPLEVIEVAEIE

Sequences:

>Translated_113_residues
MPDYLVVLQAAWIVRKARSVEDAMNIAVAEAGKKLNPDLDFVKIDVGDTACPKCNSPLKAVFMVAGVALVGLIFEMKVFN
AKSPEHAAKIAKYEIGKRMPRIPLEVIEVAEIE
>Mature_112_residues
PDYLVVLQAAWIVRKARSVEDAMNIAVAEAGKKLNPDLDFVKIDVGDTACPKCNSPLKAVFMVAGVALVGLIFEMKVFNA
KSPEHAAKIAKYEIGKRMPRIPLEVIEVAEIE

Specific function: Unknown

COG id: COG1885

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0212 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y282_ARCFU (O29959)

Other databases:

- EMBL:   AE000782
- PIR:   B69285
- RefSeq:   NP_069120.1
- GeneID:   1483497
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0282
- NMPDR:   fig|224325.1.peg.279
- TIGR:   AF_0282
- HOGENOM:   HBG497080
- OMA:   AHFESAF
- ProtClustDB:   PRK03922
- BioCyc:   AFUL224325:AF_0282-MONOMER
- HAMAP:   MF_01223
- InterPro:   IPR007564
- PIRSF:   PIRSF016934
- ProDom:   PD020367

Pfam domain/function: PF04475 DUF555

EC number: NA

Molecular weight: Translated: 12367; Mature: 12236

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYLVVLQAAWIVRKARSVEDAMNIAVAEAGKKLNPDLDFVKIDVGDTACPKCNSPLKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHH
VFMVAGVALVGLIFEMKVFNAKSPEHAAKIAKYEIGKRMPRIPLEVIEVAEIE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PDYLVVLQAAWIVRKARSVEDAMNIAVAEAGKKLNPDLDFVKIDVGDTACPKCNSPLKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHH
VFMVAGVALVGLIFEMKVFNAKSPEHAAKIAKYEIGKRMPRIPLEVIEVAEIE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475