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The map label for this gene is lpsE [H]

Identifier: 114800480

GI number: 114800480

Start: 19981

End: 21030

Strand: Direct

Name: lpsE [H]

Synonym: HNE_0029

Alternate gene names: 114800480

Gene position: 19981-21030 (Clockwise)

Preceding gene: 114798480

Following gene: 114797256

Centisome position: 0.54

GC content: 63.24

Gene sequence:

>1050_bases
ATGCGGGTGATGCATGTCATGGCGGGCGCGGCGGAAGGCGGCGCGGAAAACATCATGCTGGAGTCGGTTCTCGCCCTCGC
CGAGGCCGGGCACACACAGCATGTGGTGACACGGCAAGAAAACTTATTCCGTATCGAAAAGTTCAAGCAGGCGGGCATAA
GTGTTGACCTAGCCACCTTCAACCGGCTTTGGCCCCTTCCAACGCAGGGCACCATTCGGCGCAGTATCAAAGCGTTCAAA
CCCGACATCATCGAATACTGGATGGGCCGCGCCGGACAGTTCGCGCCCAAAGCCTACCGTAATCGCTCGATCGGCTGGTA
TGGCGGCTATTACAAGCTCGCCCGCTTCACCAAGTGCGAATGGCATGTCGGCCTCACGATTGATCTCCTGCGCCATATCC
GCGAACAGGGCGTGCCGGAGGATCGTTCCGCCATCATCCATACGTATGCGGATTTTACCGGCTCGGCGCCCGCTGATCGC
GCCGCCCTCGATACCCCGGCCGATGCCCCGGTGGCCTTGGCTCTGGCGCGTCTGCATGAAAAGAAGGGGCTCGATACGCT
CCTTGATGCAACGGCCAAGGTGCCTGGCCTTTATGTCTGGATCGCGGGGGAGGGGCCGCTGGAGGCAGACCTGAAAGCGC
ATTGCGCCCGTCTGGGGCTGGGCGACCGCGTGCGCTTCCTCGGCTGGCGGAATGATCGCGGCGCGCTGCTCGAGGCTTGC
GATGTGGTGGCATTCCCTTCGCGGTATGAGCCCTTCGGCACGGTGACGGTCGATGCCTGGGCTGCGTCGCGTCCGCTCGT
CGCGGCTGATGCCGCTGGTCCTGCCGCCTATGTGAAGGACGGGGTCAACGGCCTTCTCATCCCGAAGAATGATGTCGATG
CCCTCGCCAATGCCTTGACCCGCGTGATCACCGACAAGGCTCTCGCCGCCAGGATCGTGGAAGGGGGCCGCGCCAGCTAT
GAAGCGCAGTTCAACAAGGCGGCCTTCCAGCGCGACTCGGCGGCGCTTTATGAGCGCATCCGCGACCATGCCGGGCCTTT
TGAGGGCTGA

Upstream 100 bases:

>100_bases
TCTCTAGGCAGTTCATTTCCCGCTGCCAAGCATAGTTTGCCGCAATCGCTGTTCCCCGGTATGCGCTGTTGCAACAGGAA
TACGGTTCCAGGAGAGCGAA

Downstream 100 bases:

>100_bases
TCAGGACCCTTTCGTTGCGGCGAAGAACGCGCGGTAAAGCCGGGCCGCGGTGTATTTTCCGAGCCCTGTCTCCACCCGCA
CACCGGCCTCGCGCAATATG

Product: glycosyl transferase group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRVMHVMAGAAEGGAENIMLESVLALAEAGHTQHVVTRQENLFRIEKFKQAGISVDLATFNRLWPLPTQGTIRRSIKAFK
PDIIEYWMGRAGQFAPKAYRNRSIGWYGGYYKLARFTKCEWHVGLTIDLLRHIREQGVPEDRSAIIHTYADFTGSAPADR
AALDTPADAPVALALARLHEKKGLDTLLDATAKVPGLYVWIAGEGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEAC
DVVAFPSRYEPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIPKNDVDALANALTRVITDKALAARIVEGGRASY
EAQFNKAAFQRDSAALYERIRDHAGPFEG

Sequences:

>Translated_349_residues
MRVMHVMAGAAEGGAENIMLESVLALAEAGHTQHVVTRQENLFRIEKFKQAGISVDLATFNRLWPLPTQGTIRRSIKAFK
PDIIEYWMGRAGQFAPKAYRNRSIGWYGGYYKLARFTKCEWHVGLTIDLLRHIREQGVPEDRSAIIHTYADFTGSAPADR
AALDTPADAPVALALARLHEKKGLDTLLDATAKVPGLYVWIAGEGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEAC
DVVAFPSRYEPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIPKNDVDALANALTRVITDKALAARIVEGGRASY
EAQFNKAAFQRDSAALYERIRDHAGPFEG
>Mature_349_residues
MRVMHVMAGAAEGGAENIMLESVLALAEAGHTQHVVTRQENLFRIEKFKQAGISVDLATFNRLWPLPTQGTIRRSIKAFK
PDIIEYWMGRAGQFAPKAYRNRSIGWYGGYYKLARFTKCEWHVGLTIDLLRHIREQGVPEDRSAIIHTYADFTGSAPADR
AALDTPADAPVALALARLHEKKGLDTLLDATAKVPGLYVWIAGEGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEAC
DVVAFPSRYEPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIPKNDVDALANALTRVITDKALAARIVEGGRASY
EAQFNKAAFQRDSAALYERIRDHAGPFEG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38136; Mature: 38136

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMHVMAGAAEGGAENIMLESVLALAEAGHTQHVVTRQENLFRIEKFKQAGISVDLATF
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHH
NRLWPLPTQGTIRRSIKAFKPDIIEYWMGRAGQFAPKAYRNRSIGWYGGYYKLARFTKCE
HHCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHEECE
WHVGLTIDLLRHIREQGVPEDRSAIIHTYADFTGSAPADRAALDTPADAPVALALARLHE
EECCHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KKGLDTLLDATAKVPGLYVWIAGEGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEAC
HCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH
DVVAFPSRYEPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIPKNDVDALANALT
HHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHHHH
RVITDKALAARIVEGGRASYEAQFNKAAFQRDSAALYERIRDHAGPFEG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRVMHVMAGAAEGGAENIMLESVLALAEAGHTQHVVTRQENLFRIEKFKQAGISVDLATF
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHH
NRLWPLPTQGTIRRSIKAFKPDIIEYWMGRAGQFAPKAYRNRSIGWYGGYYKLARFTKCE
HHCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHEECE
WHVGLTIDLLRHIREQGVPEDRSAIIHTYADFTGSAPADRAALDTPADAPVALALARLHE
EECCHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KKGLDTLLDATAKVPGLYVWIAGEGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEAC
HCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH
DVVAFPSRYEPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIPKNDVDALANALT
HHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHHHH
RVITDKALAARIVEGGRASYEAQFNKAAFQRDSAALYERIRDHAGPFEG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]