| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gltT [H]
Identifier: 114800433
GI number: 114800433
Start: 396465
End: 397778
Strand: Reverse
Name: gltT [H]
Synonym: HNE_0400
Alternate gene names: 114800433
Gene position: 397778-396465 (Counterclockwise)
Preceding gene: 114799648
Following gene: 114800549
Centisome position: 10.74
GC content: 62.25
Gene sequence:
>1314_bases ATGAAGGCCTGGTTTGCAATCGATCTGTGGAAGCGTGTGCTGCTCGGCCTCGTCCTGGGCACGCTGATAGGTCTGGCCTT CCGCTATGGCCTTGGCCCGGAGCGGGGCAGCGAACTCGTCACCACCTGGTTCAAGCCGGTCGGCGACGCCTTCATCAGCC TGATCCAGATGCTGGTTGTGCCACTGATCTTCACCACCCTGGTTTCCGGCGTGCTGGCAATGGGCGATCCCAAACGTCTC GGCAGCCTCGGCGGCCGCGCGATGGCGATGTATATGATCACCACCGTCTTCGCGATCTGCTTCGGCCTGCTGATGGGGAC GCTGGTTCAACCCGGCGCGGGCTTTGATACGTCCATCGCCTCGACCACAGACATTGAAGAAACCCGCTCGCGCCTCGCCG CCAACGCGCCGCCCGGCACGGTGGGCGAGCAGCTGATGAATACGCTGCTCTCGATCATCCCGAAAAATCCGATTGATGCC CTCGCCAGGGGCGATGTGTTGCAGATCATCTTCTTTGCCATCCTTCTGGGCATCGGCATCATGATGGCCGGGGAAGCGGG CAAGCCGGTCGAAAAGCTCTTCGCCTCAGCCTCTGAAGCGATCATGAAGCTGACCCTGATCGTTATGGAAACCGCGCCGC TGGGCGTGCTGGCCCTGATGGCCTGGGTGATGGGAGACCGGGGGCTCAGCGTGCTCACCGTACTCGGCAAGATGACGCTG GCCCATTACAGCGCCTGTATCCTGCACATCCTGTTCACCTATGGCTTCATCGTGAAGGGCGTGCTGCGCCTGCCGCTCCT TCCCTTCCTGCGCGGCGTGTTTGACGCGCAGATGGTGGCCTTCTCGACCTCCTCTTCCAACGCCACCCTGCCAATGACGA TTTCCTGCGCCACCAAGAATCTCGGCATCGGCAAGCCGATTGCCTCCTCGGTCCTGCCGCTGGGCGCCACGATCAACATG GACGGCACGGCGCTCTACCAGGGGCTGATCGCCCTCTTTGCCGTTCAGGCGCTTGGCATCCCGATGGAGCCGAGCATGTA TCTGACCATCATTCTCATGGCGACACTGGTCTCGATCGGCACGGCGGGCGTGCCCTCGGTCAGCCTGCTGCTGGCCACCA CCACGCTCAGCATCGTCGGCGCCAACCCCGAACAGATCGTGCTGATCATCGCCGTCCTGTTCCCGTTCGACCGTATCCTC GACATGATGCGCACAGTGACCAACATCACCGGTGACCTTGCTGTCGGCACAGCCGTCGCCAAATGGGAAGGCGACCTGGA CGAAGACGTCTTCCGGGCAAAAGACCCGGTCTGA
Upstream 100 bases:
>100_bases CCCCAATGGCAAGCGCTGGCGCAATCGCTGCAGCCCCGACAGTTGCCTTCTCCAGCCCTGCCCCCTACCGTTGCCTCAGG GTAACTGCTGGGAGTGGCGT
Downstream 100 bases:
>100_bases CCCGCAAAACCCCTTCTCCCCCAGGGGGAGAAGGAGGGGTTAGGGATGAGGGGGCGAGGCCAGACGCTATTGCCTCGAGC CTCGCAAACCCGCGCCGCCT
Product: sodium/dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKAWFAIDLWKRVLLGLVLGTLIGLAFRYGLGPERGSELVTTWFKPVGDAFISLIQMLVVPLIFTTLVSGVLAMGDPKRL GSLGGRAMAMYMITTVFAICFGLLMGTLVQPGAGFDTSIASTTDIEETRSRLAANAPPGTVGEQLMNTLLSIIPKNPIDA LARGDVLQIIFFAILLGIGIMMAGEAGKPVEKLFASASEAIMKLTLIVMETAPLGVLALMAWVMGDRGLSVLTVLGKMTL AHYSACILHILFTYGFIVKGVLRLPLLPFLRGVFDAQMVAFSTSSSNATLPMTISCATKNLGIGKPIASSVLPLGATINM DGTALYQGLIALFAVQALGIPMEPSMYLTIILMATLVSIGTAGVPSVSLLLATTTLSIVGANPEQIVLIIAVLFPFDRIL DMMRTVTNITGDLAVGTAVAKWEGDLDEDVFRAKDPV
Sequences:
>Translated_437_residues MKAWFAIDLWKRVLLGLVLGTLIGLAFRYGLGPERGSELVTTWFKPVGDAFISLIQMLVVPLIFTTLVSGVLAMGDPKRL GSLGGRAMAMYMITTVFAICFGLLMGTLVQPGAGFDTSIASTTDIEETRSRLAANAPPGTVGEQLMNTLLSIIPKNPIDA LARGDVLQIIFFAILLGIGIMMAGEAGKPVEKLFASASEAIMKLTLIVMETAPLGVLALMAWVMGDRGLSVLTVLGKMTL AHYSACILHILFTYGFIVKGVLRLPLLPFLRGVFDAQMVAFSTSSSNATLPMTISCATKNLGIGKPIASSVLPLGATINM DGTALYQGLIALFAVQALGIPMEPSMYLTIILMATLVSIGTAGVPSVSLLLATTTLSIVGANPEQIVLIIAVLFPFDRIL DMMRTVTNITGDLAVGTAVAKWEGDLDEDVFRAKDPV >Mature_437_residues MKAWFAIDLWKRVLLGLVLGTLIGLAFRYGLGPERGSELVTTWFKPVGDAFISLIQMLVVPLIFTTLVSGVLAMGDPKRL GSLGGRAMAMYMITTVFAICFGLLMGTLVQPGAGFDTSIASTTDIEETRSRLAANAPPGTVGEQLMNTLLSIIPKNPIDA LARGDVLQIIFFAILLGIGIMMAGEAGKPVEKLFASASEAIMKLTLIVMETAPLGVLALMAWVMGDRGLSVLTVLGKMTL AHYSACILHILFTYGFIVKGVLRLPLLPFLRGVFDAQMVAFSTSSSNATLPMTISCATKNLGIGKPIASSVLPLGATINM DGTALYQGLIALFAVQALGIPMEPSMYLTIILMATLVSIGTAGVPSVSLLLATTTLSIVGANPEQIVLIIAVLFPFDRIL DMMRTVTNITGDLAVGTAVAKWEGDLDEDVFRAKDPV
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=479, Percent_Identity=31.1064718162839, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI169790839, Length=447, Percent_Identity=31.9910514541387, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI194239697, Length=484, Percent_Identity=30.1652892561983, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI40254478, Length=410, Percent_Identity=31.219512195122, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI66773030, Length=469, Percent_Identity=31.5565031982942, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI5032093, Length=445, Percent_Identity=31.4606741573034, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI21314632, Length=410, Percent_Identity=29.5121951219512, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI262359914, Length=385, Percent_Identity=30.1298701298701, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI223468566, Length=296, Percent_Identity=34.1216216216216, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI223468564, Length=285, Percent_Identity=34.3859649122807, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI301601644, Length=147, Percent_Identity=36.734693877551, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI1790514, Length=423, Percent_Identity=36.4066193853428, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI1789947, Length=440, Percent_Identity=30.6818181818182, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788024, Length=405, Percent_Identity=28.3950617283951, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789473, Length=335, Percent_Identity=27.7611940298507, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71983106, Length=463, Percent_Identity=30.4535637149028, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71983099, Length=463, Percent_Identity=30.4535637149028, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71996953, Length=459, Percent_Identity=29.1938997821351, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI193206505, Length=450, Percent_Identity=30.8888888888889, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17537407, Length=453, Percent_Identity=31.3465783664459, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193206654, Length=427, Percent_Identity=26.9320843091335, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17541374, Length=431, Percent_Identity=26.4501160092807, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24583025, Length=432, Percent_Identity=29.8611111111111, Blast_Score=154, Evalue=8e-38, Organism=Drosophila melanogaster, GI17137668, Length=432, Percent_Identity=29.8611111111111, Blast_Score=154, Evalue=8e-38, Organism=Drosophila melanogaster, GI24583023, Length=432, Percent_Identity=29.8611111111111, Blast_Score=154, Evalue=8e-38, Organism=Drosophila melanogaster, GI281360481, Length=471, Percent_Identity=26.3269639065817, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI281360483, Length=471, Percent_Identity=26.3269639065817, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI17137666, Length=471, Percent_Identity=26.3269639065817, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46286; Mature: 46286
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAWFAIDLWKRVLLGLVLGTLIGLAFRYGLGPERGSELVTTWFKPVGDAFISLIQMLVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLIFTTLVSGVLAMGDPKRLGSLGGRAMAMYMITTVFAICFGLLMGTLVQPGAGFDTSIA HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC STTDIEETRSRLAANAPPGTVGEQLMNTLLSIIPKNPIDALARGDVLQIIFFAILLGIGI CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH MMAGEAGKPVEKLFASASEAIMKLTLIVMETAPLGVLALMAWVMGDRGLSVLTVLGKMTL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH AHYSACILHILFTYGFIVKGVLRLPLLPFLRGVFDAQMVAFSTSSSNATLPMTISCATKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCC LGIGKPIASSVLPLGATINMDGTALYQGLIALFAVQALGIPMEPSMYLTIILMATLVSIG CCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC TAGVPSVSLLLATTTLSIVGANPEQIVLIIAVLFPFDRILDMMRTVTNITGDLAVGTAVA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KWEGDLDEDVFRAKDPV HCCCCCCHHHHHCCCCC >Mature Secondary Structure MKAWFAIDLWKRVLLGLVLGTLIGLAFRYGLGPERGSELVTTWFKPVGDAFISLIQMLVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLIFTTLVSGVLAMGDPKRLGSLGGRAMAMYMITTVFAICFGLLMGTLVQPGAGFDTSIA HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC STTDIEETRSRLAANAPPGTVGEQLMNTLLSIIPKNPIDALARGDVLQIIFFAILLGIGI CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH MMAGEAGKPVEKLFASASEAIMKLTLIVMETAPLGVLALMAWVMGDRGLSVLTVLGKMTL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH AHYSACILHILFTYGFIVKGVLRLPLLPFLRGVFDAQMVAFSTSSSNATLPMTISCATKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCC LGIGKPIASSVLPLGATINMDGTALYQGLIALFAVQALGIPMEPSMYLTIILMATLVSIG CCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC TAGVPSVSLLLATTTLSIVGANPEQIVLIIAVLFPFDRILDMMRTVTNITGDLAVGTAVA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KWEGDLDEDVFRAKDPV HCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]