| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is corA [H]
Identifier: 114800373
GI number: 114800373
Start: 2948987
End: 2949991
Strand: Reverse
Name: corA [H]
Synonym: HNE_2787
Alternate gene names: 114800373
Gene position: 2949991-2948987 (Counterclockwise)
Preceding gene: 114799604
Following gene: 114798807
Centisome position: 79.62
GC content: 59.2
Gene sequence:
>1005_bases ATGATCCGCACGTTTACCAATTCCGAGCATCGCTTCGTTCTCTCGGGCGAAACGCTCGAGCATCTCGACACGGCGGTCTG GGTCGACATCCTGCGGCCGAGCAAGGATGAAGAAACCGCGATCGAGCGCGCGCTTGGCATTGATGTGCCCACCATCGAGG AAATGAGCGAGATTGAAGTCTCCAGCCGTCTCTATACGGAGGAGGGGGCGACGTTCATGACCACGATGATGCTCTCGCAT ACCGATGGCGACAATGTGCTGCTGTCACCGATCACCTTCATCCTCAAGGGCGAGCAGCTGATAACGGTGCGCTATGCCGA GCCGCGTTCCATCGATGCGTTCATCGCGCGCTGCCAGAAGGGCGCAACCTATACCGCCGATGGGGTTGTGGCGGGGTTGC TGGATGGGCTGATCGAGCGGATCGGGGATGTTCTGGAGCGGACGGGGCATGAGCTGGACGCGCTGTCTGACAACATCTTT GCCATCAAGGCGCCACTTGTGGACGGGGCGGTGGCGGAGAAGGTGTCGAAGCGGAACAAGGCCCGGCCCCGCAACTATCA GTCCGTCCTCGAACAGATTGGCCGAAAGGGTGACCTTCTCTCGAAGGTGCGTGAGAGCCTGATTTCGTTTCAGCGGTTGC TGGCATTCGGAACCGAAATTGCCGTCAGCCGCAAGCCGGGCAAGGAGTATGAAGGACGGTTGCGCACGCTGACGCGAGAC GTGCAATCGCTGAGCGACCACACGAGCTTCCTTACACAGAAGATCAACTTTCTGCTGGATGCCACGCTTGGCATGATCAA TATCGAGCAGACGGGCATCATCAAGATTTTCTCGGTGGCGGCGGTTGTGTTCCTGCCGCCGACGCTGATTGCCTCGATCT ACGGAATGAATTTCGAGGTGATGCCGGAGCTGTCCTGGCCGGTGGGGTATCCGTTGGCGCTCTGCCTGATGGTTCTCTCG GCGGTCGTGCCCTACCAGTTCTTCAAATGGCGGGGCTGGCTGTAA
Upstream 100 bases:
>100_bases CGGGCGGCTGATCCGGCTGACACCGGCTGAATAAGCCTCACCTGTTGCCAAGTAAGGCGACTTTACGCAGACATGGGCGG ACCGTTTTCCGGGGCCGCCC
Downstream 100 bases:
>100_bases CGTGAAGCGCGGGGCAGGCATGAGCCCGCCCCGCATGTCTCGACGTCTCAGGCGGTGACGCGCAGGCCCGCCATGCGGGT GATGGTCGCTTCGGCGTCGC
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIRTFTNSEHRFVLSGETLEHLDTAVWVDILRPSKDEETAIERALGIDVPTIEEMSEIEVSSRLYTEEGATFMTTMMLSH TDGDNVLLSPITFILKGEQLITVRYAEPRSIDAFIARCQKGATYTADGVVAGLLDGLIERIGDVLERTGHELDALSDNIF AIKAPLVDGAVAEKVSKRNKARPRNYQSVLEQIGRKGDLLSKVRESLISFQRLLAFGTEIAVSRKPGKEYEGRLRTLTRD VQSLSDHTSFLTQKINFLLDATLGMINIEQTGIIKIFSVAAVVFLPPTLIASIYGMNFEVMPELSWPVGYPLALCLMVLS AVVPYQFFKWRGWL
Sequences:
>Translated_334_residues MIRTFTNSEHRFVLSGETLEHLDTAVWVDILRPSKDEETAIERALGIDVPTIEEMSEIEVSSRLYTEEGATFMTTMMLSH TDGDNVLLSPITFILKGEQLITVRYAEPRSIDAFIARCQKGATYTADGVVAGLLDGLIERIGDVLERTGHELDALSDNIF AIKAPLVDGAVAEKVSKRNKARPRNYQSVLEQIGRKGDLLSKVRESLISFQRLLAFGTEIAVSRKPGKEYEGRLRTLTRD VQSLSDHTSFLTQKINFLLDATLGMINIEQTGIIKIFSVAAVVFLPPTLIASIYGMNFEVMPELSWPVGYPLALCLMVLS AVVPYQFFKWRGWL >Mature_334_residues MIRTFTNSEHRFVLSGETLEHLDTAVWVDILRPSKDEETAIERALGIDVPTIEEMSEIEVSSRLYTEEGATFMTTMMLSH TDGDNVLLSPITFILKGEQLITVRYAEPRSIDAFIARCQKGATYTADGVVAGLLDGLIERIGDVLERTGHELDALSDNIF AIKAPLVDGAVAEKVSKRNKARPRNYQSVLEQIGRKGDLLSKVRESLISFQRLLAFGTEIAVSRKPGKEYEGRLRTLTRD VQSLSDHTSFLTQKINFLLDATLGMINIEQTGIIKIFSVAAVVFLPPTLIASIYGMNFEVMPELSWPVGYPLALCLMVLS AVVPYQFFKWRGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=340, Percent_Identity=35, Blast_Score=184, Evalue=8e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37290; Mature: 37290
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTFTNSEHRFVLSGETLEHLDTAVWVDILRPSKDEETAIERALGIDVPTIEEMSEIEV CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH SSRLYTEEGATFMTTMMLSHTDGDNVLLSPITFILKGEQLITVRYAEPRSIDAFIARCQK HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHHC GATYTADGVVAGLLDGLIERIGDVLERTGHELDALSDNIFAIKAPLVDGAVAEKVSKRNK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHCC ARPRNYQSVLEQIGRKGDLLSKVRESLISFQRLLAFGTEIAVSRKPGKEYEGRLRTLTRD CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHH VQSLSDHTSFLTQKINFLLDATLGMINIEQTGIIKIFSVAAVVFLPPTLIASIYGMNFEV HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEE MPELSWPVGYPLALCLMVLSAVVPYQFFKWRGWL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRTFTNSEHRFVLSGETLEHLDTAVWVDILRPSKDEETAIERALGIDVPTIEEMSEIEV CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHH SSRLYTEEGATFMTTMMLSHTDGDNVLLSPITFILKGEQLITVRYAEPRSIDAFIARCQK HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHHC GATYTADGVVAGLLDGLIERIGDVLERTGHELDALSDNIFAIKAPLVDGAVAEKVSKRNK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHCC ARPRNYQSVLEQIGRKGDLLSKVRESLISFQRLLAFGTEIAVSRKPGKEYEGRLRTLTRD CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHH VQSLSDHTSFLTQKINFLLDATLGMINIEQTGIIKIFSVAAVVFLPPTLIASIYGMNFEV HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHCCCEEE MPELSWPVGYPLALCLMVLSAVVPYQFFKWRGWL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]