Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114800268

Identifier: 114800268

GI number: 114800268

Start: 3568322

End: 3569170

Strand: Direct

Name: 114800268

Synonym: HNE_3428

Alternate gene names: NA

Gene position: 3568322-3569170 (Clockwise)

Preceding gene: 114798478

Following gene: 114799184

Centisome position: 96.31

GC content: 65.61

Gene sequence:

>849_bases
ATGCCAGCGGCCACCCCCTGCCCGCCTGCTGCCGAGCTGGCGCAGCGGGGGGATGAGCGCGCCCGCGGCGAGGCAATCCT
TGATATGGCCCAGTCCGAGCGGGAGACCCTGGCGATCGCCCTGCTGCCCTGCCTTGGAGACCCTGACCCCGCCCTGCGTG
ATGGGGTGACCTATACCGCCCTCTCCCAGATGATGCGCAGCCAGCTGATCGGAAGCGAAACACTCGCGGCAATGAAGGCA
GAGCTTCTCGGTATGCTGGCGGCAGAGGACGATCCCGCCGGCTTTGCCCGCCCCTTCGCCGCCCTCGTGCTGGCTGAAGT
CGCCCGCACCGACCGCGTGGCGCCGTGGATGACCCCGCAGGAGCGCGCCGGTCTGATCGCGGCGGCAGACGCCTATCTTG
CGAGCCTCACCGATTATCGCGGGTTTGATGAAGCTGAAGGCTGGCGCCATGGCGTGGCCCACGCGGCCGACTTTCTGATG
CAGCTGTCCCTCAATCCCGAGATCACAAGGCCCCAGGCCGAAGCGATCCTGGCCACCGTAGCGCGCAAGGTGGGCACGCC
GGAACATGCCTATGTTTTCGGGGAAAGTGAGCGGCTGGCCGCGCCGGTGATGTATCTGGCCCGGCGGGAGATCTTCAGCG
AAGCGGATTGGGAAGCCTGGTTCAGCGGCCTCTGGCCTGCCGATGATCCCCTGCGTGAAAACGCTTACACATCCGAAGCA
GCCCTGACAAAGCTGCACAATCTGCGCGCCTTTTCGCAAGCCATCTATGTCAGCGCCAAGGCCAGCAATGAAGCGACCTA
TGAACCGGTGGCGCGCGGCGCCTTCGCTCTTCTCAATTCCCTTCCCTGA

Upstream 100 bases:

>100_bases
GGAGGCCCTGAATATGCTGCGCTATCTGATTTTGCCGCTGCTTCTGGGGGCCTGCGCCGCCACCCCGGCCCCAGAATTGG
CCCCGGCCTCAGCGCCCCCA

Downstream 100 bases:

>100_bases
GCCAAACCTTGCAGCAAAAGCCCTTTTGCGGCACTTGATGGCGCCATGACCGTCCAGACCTCTCCGCCTAGCGCTGCGCT
TGCAGAAACGATGCTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MPAATPCPPAAELAQRGDERARGEAILDMAQSERETLAIALLPCLGDPDPALRDGVTYTALSQMMRSQLIGSETLAAMKA
ELLGMLAAEDDPAGFARPFAALVLAEVARTDRVAPWMTPQERAGLIAAADAYLASLTDYRGFDEAEGWRHGVAHAADFLM
QLSLNPEITRPQAEAILATVARKVGTPEHAYVFGESERLAAPVMYLARREIFSEADWEAWFSGLWPADDPLRENAYTSEA
ALTKLHNLRAFSQAIYVSAKASNEATYEPVARGAFALLNSLP

Sequences:

>Translated_282_residues
MPAATPCPPAAELAQRGDERARGEAILDMAQSERETLAIALLPCLGDPDPALRDGVTYTALSQMMRSQLIGSETLAAMKA
ELLGMLAAEDDPAGFARPFAALVLAEVARTDRVAPWMTPQERAGLIAAADAYLASLTDYRGFDEAEGWRHGVAHAADFLM
QLSLNPEITRPQAEAILATVARKVGTPEHAYVFGESERLAAPVMYLARREIFSEADWEAWFSGLWPADDPLRENAYTSEA
ALTKLHNLRAFSQAIYVSAKASNEATYEPVARGAFALLNSLP
>Mature_281_residues
PAATPCPPAAELAQRGDERARGEAILDMAQSERETLAIALLPCLGDPDPALRDGVTYTALSQMMRSQLIGSETLAAMKAE
LLGMLAAEDDPAGFARPFAALVLAEVARTDRVAPWMTPQERAGLIAAADAYLASLTDYRGFDEAEGWRHGVAHAADFLMQ
LSLNPEITRPQAEAILATVARKVGTPEHAYVFGESERLAAPVMYLARREIFSEADWEAWFSGLWPADDPLRENAYTSEAA
LTKLHNLRAFSQAIYVSAKASNEATYEPVARGAFALLNSLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30505; Mature: 30374

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAATPCPPAAELAQRGDERARGEAILDMAQSERETLAIALLPCLGDPDPALRDGVTYTA
CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHCCCHHHH
LSQMMRSQLIGSETLAAMKAELLGMLAAEDDPAGFARPFAALVLAEVARTDRVAPWMTPQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
ERAGLIAAADAYLASLTDYRGFDEAEGWRHGVAHAADFLMQLSLNPEITRPQAEAILATV
HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ARKVGTPEHAYVFGESERLAAPVMYLARREIFSEADWEAWFSGLWPADDPLRENAYTSEA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHH
ALTKLHNLRAFSQAIYVSAKASNEATYEPVARGAFALLNSLP
HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAATPCPPAAELAQRGDERARGEAILDMAQSERETLAIALLPCLGDPDPALRDGVTYTA
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHCCCHHHH
LSQMMRSQLIGSETLAAMKAELLGMLAAEDDPAGFARPFAALVLAEVARTDRVAPWMTPQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
ERAGLIAAADAYLASLTDYRGFDEAEGWRHGVAHAADFLMQLSLNPEITRPQAEAILATV
HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ARKVGTPEHAYVFGESERLAAPVMYLARREIFSEADWEAWFSGLWPADDPLRENAYTSEA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHH
ALTKLHNLRAFSQAIYVSAKASNEATYEPVARGAFALLNSLP
HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA