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The map label for this gene is pinE [C]

Identifier: 114800258

GI number: 114800258

Start: 2709830

End: 2711485

Strand: Direct

Name: pinE [C]

Synonym: HNE_2556

Alternate gene names: 114800258

Gene position: 2709830-2711485 (Clockwise)

Preceding gene: 114797764

Following gene: 114799302

Centisome position: 73.14

GC content: 60.02

Gene sequence:

>1656_bases
ATGTCAGCAGGCGCATCGGGCCGGCGGATTGTCCGCTGCGCCATCTACACGCGCAAGTCCAGCGAAGAAGGTCTCGACCA
GGCCTTCAACTCGCTCGACGCACAGAGGGAGGCCTGCGAAGCATACATCGCCAGCCAACGCCATGAAGGCTGGAAGCTGA
TCCCCGCGCATTACAATGATGGCGGGCTTTCCGGCGGAACGCTCGAGCGCCCAGCCCTAACCCGGCTCCTGGAAGACATC
GACGCCGGCAAGATTGACCTTGTTGTCGTCTACAAGATCGACCGACTGACGCGCTCGCTCGCTGACTTCGCCAAGCTGGT
GGACAGGTTCGATGCGGCCGGCTGTTCCTTCGTTTCGGTCACGCAAGCGTTCAACACCTCCACAAGCATGGGAAGGCTGA
CCCTGAACGTGCTGCTCTCCTTTGCCCAGTTCGAACGGGAAGTGACCGCTGAACGTATTCGGGACAAGATCTCAGCATCC
AAAAAGAAAGGCTACTGGATGGGCGGCCTGCCACCGCTCGGCTACGAACCTCATCCTGATCCTCAGACCCGCAGCCTGGT
GATCAATGCTCCCGAGGCGGAAATCGTCGGGGAATTGTTTCAGCTTTATGATACGATTGGCTGCGTCCGGCTGGTCGAGG
CAGAAGCTGCGCGCCGAGGCTACCGAACCAAACCCCGGACCTTCAGCAATGGCCGCAAAGTCGGCGGCGAACCGCTGAGG
CGCGGCCACATTCATTTCCTGCTGCGTAATCCAATTTATGCGGGCCGCATTCGCCACAAGCGCGAAGTTCACGACGGTTT
GCATGAGCCGCTCATCGATGAGGCGCTGTGGGACCGGGTTCAGGCAAAGCTCGGCGCGCAGGATAAGCCGGGCCGGCGAA
GCGCATCTGGCAATCGCCCCTTGCTGACCGGGAAGCTGGTCGATGAAACCGGCGATCGGCTTACGCCCTCTCATGCGAGC
AAAGGCCCTCGGCGTTATCGCTACTATGTGTCGTCTCGCCTTCTCGAAGGCAGAGGCAAGCGCGCCGATGGCTGGCGCCT
GCCCGCCAAGCAGCTCGAAACCCAGCTTGCCCAGGCTGTCAGCGAGCATCTCATCACCGCAGGACCTCAGATATTCCAAA
GCCCCACTGCGACACTCATTGAACAAAGTATGCCCCAGTTGGCGTCAATCTCGAACCTCGAGTCCCTGGAGCTCATCGCG
CAATGCAAAATTTCAGAGGGGCAGCTCGAACTGGAAATCGCCGCAAAACCTCTGGCCGAAAAGTTGAGGATAAAGGAAAC
TGAATTGGCTGCTCCCTTTCTGAGCTTCACCTCGCCCTTTCAGATCAAGCGCCGAGGCGTCGAAGCCCGTCTCATCATCG
GCGGCGTTGCACCCCGGACGAATGAAACATTGATCCGCGCCATTGCGCTGGCGCATGCCTGGGCAAAAGAGCTTCGCGCC
GGCACATCTATGACCACCCTCGCCGAGCGCCGCAGCTGTACGCTCGCGTTCATCCGTCAGCGTTTGCCGCTGGCGTTTCT
CTCGCCCAGTATTATCGAGGCGATCCTTGCAGGCCGCCAGCCTCACGACCTGACGCTCACCAAGCTGATCACTCATCCTA
TTCCGCTCGACTGGGATGATCAGTGGGCAGAACTCGGCTTTTCAGCCAGCGCCTGA

Upstream 100 bases:

>100_bases
ATCAGGGGCGCATCTACAGATCCCTTTCTGCAATCGCGAGAGAAATCACGGGCGCCCGCTGGTCGGGCCCCCGCTTTTTC
GGCTTGAAAGGTACATCGTA

Downstream 100 bases:

>100_bases
TAACGACAAATCATTCCCTGCTTTTGCAAAGGCCTTCCCTGTTTGGGCCGGGAAAATTCCCTGTTCCGCGTTTAGGGAAT
TTGCGCGCATCGCCCTGAAA

Product: resolvase family site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSAGASGRRIVRCAIYTRKSSEEGLDQAFNSLDAQREACEAYIASQRHEGWKLIPAHYNDGGLSGGTLERPALTRLLEDI
DAGKIDLVVVYKIDRLTRSLADFAKLVDRFDAAGCSFVSVTQAFNTSTSMGRLTLNVLLSFAQFEREVTAERIRDKISAS
KKKGYWMGGLPPLGYEPHPDPQTRSLVINAPEAEIVGELFQLYDTIGCVRLVEAEAARRGYRTKPRTFSNGRKVGGEPLR
RGHIHFLLRNPIYAGRIRHKREVHDGLHEPLIDEALWDRVQAKLGAQDKPGRRSASGNRPLLTGKLVDETGDRLTPSHAS
KGPRRYRYYVSSRLLEGRGKRADGWRLPAKQLETQLAQAVSEHLITAGPQIFQSPTATLIEQSMPQLASISNLESLELIA
QCKISEGQLELEIAAKPLAEKLRIKETELAAPFLSFTSPFQIKRRGVEARLIIGGVAPRTNETLIRAIALAHAWAKELRA
GTSMTTLAERRSCTLAFIRQRLPLAFLSPSIIEAILAGRQPHDLTLTKLITHPIPLDWDDQWAELGFSASA

Sequences:

>Translated_551_residues
MSAGASGRRIVRCAIYTRKSSEEGLDQAFNSLDAQREACEAYIASQRHEGWKLIPAHYNDGGLSGGTLERPALTRLLEDI
DAGKIDLVVVYKIDRLTRSLADFAKLVDRFDAAGCSFVSVTQAFNTSTSMGRLTLNVLLSFAQFEREVTAERIRDKISAS
KKKGYWMGGLPPLGYEPHPDPQTRSLVINAPEAEIVGELFQLYDTIGCVRLVEAEAARRGYRTKPRTFSNGRKVGGEPLR
RGHIHFLLRNPIYAGRIRHKREVHDGLHEPLIDEALWDRVQAKLGAQDKPGRRSASGNRPLLTGKLVDETGDRLTPSHAS
KGPRRYRYYVSSRLLEGRGKRADGWRLPAKQLETQLAQAVSEHLITAGPQIFQSPTATLIEQSMPQLASISNLESLELIA
QCKISEGQLELEIAAKPLAEKLRIKETELAAPFLSFTSPFQIKRRGVEARLIIGGVAPRTNETLIRAIALAHAWAKELRA
GTSMTTLAERRSCTLAFIRQRLPLAFLSPSIIEAILAGRQPHDLTLTKLITHPIPLDWDDQWAELGFSASA
>Mature_550_residues
SAGASGRRIVRCAIYTRKSSEEGLDQAFNSLDAQREACEAYIASQRHEGWKLIPAHYNDGGLSGGTLERPALTRLLEDID
AGKIDLVVVYKIDRLTRSLADFAKLVDRFDAAGCSFVSVTQAFNTSTSMGRLTLNVLLSFAQFEREVTAERIRDKISASK
KKGYWMGGLPPLGYEPHPDPQTRSLVINAPEAEIVGELFQLYDTIGCVRLVEAEAARRGYRTKPRTFSNGRKVGGEPLRR
GHIHFLLRNPIYAGRIRHKREVHDGLHEPLIDEALWDRVQAKLGAQDKPGRRSASGNRPLLTGKLVDETGDRLTPSHASK
GPRRYRYYVSSRLLEGRGKRADGWRLPAKQLETQLAQAVSEHLITAGPQIFQSPTATLIEQSMPQLASISNLESLELIAQ
CKISEGQLELEIAAKPLAEKLRIKETELAAPFLSFTSPFQIKRRGVEARLIIGGVAPRTNETLIRAIALAHAWAKELRAG
TSMTTLAERRSCTLAFIRQRLPLAFLSPSIIEAILAGRQPHDLTLTKLITHPIPLDWDDQWAELGFSASA

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=111, Percent_Identity=37.8378378378378, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 61114; Mature: 60983

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGASGRRIVRCAIYTRKSSEEGLDQAFNSLDAQREACEAYIASQRHEGWKLIPAHYND
CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GGLSGGTLERPALTRLLEDIDAGKIDLVVVYKIDRLTRSLADFAKLVDRFDAAGCSFVSV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TQAFNTSTSMGRLTLNVLLSFAQFEREVTAERIRDKISASKKKGYWMGGLPPLGYEPHPD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PQTRSLVINAPEAEIVGELFQLYDTIGCVRLVEAEAARRGYRTKPRTFSNGRKVGGEPLR
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
RGHIHFLLRNPIYAGRIRHKREVHDGLHEPLIDEALWDRVQAKLGAQDKPGRRSASGNRP
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LLTGKLVDETGDRLTPSHASKGPRRYRYYVSSRLLEGRGKRADGWRLPAKQLETQLAQAV
EEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SEHLITAGPQIFQSPTATLIEQSMPQLASISNLESLELIAQCKISEGQLELEIAAKPLAE
HHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEHHHHHH
KLRIKETELAAPFLSFTSPFQIKRRGVEARLIIGGVAPRTNETLIRAIALAHAWAKELRA
HHHCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GTSMTTLAERRSCTLAFIRQRLPLAFLSPSIIEAILAGRQPHDLTLTKLITHPIPLDWDD
CCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCH
QWAELGFSASA
HHHHCCCCCCC
>Mature Secondary Structure 
SAGASGRRIVRCAIYTRKSSEEGLDQAFNSLDAQREACEAYIASQRHEGWKLIPAHYND
CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GGLSGGTLERPALTRLLEDIDAGKIDLVVVYKIDRLTRSLADFAKLVDRFDAAGCSFVSV
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TQAFNTSTSMGRLTLNVLLSFAQFEREVTAERIRDKISASKKKGYWMGGLPPLGYEPHPD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PQTRSLVINAPEAEIVGELFQLYDTIGCVRLVEAEAARRGYRTKPRTFSNGRKVGGEPLR
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
RGHIHFLLRNPIYAGRIRHKREVHDGLHEPLIDEALWDRVQAKLGAQDKPGRRSASGNRP
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LLTGKLVDETGDRLTPSHASKGPRRYRYYVSSRLLEGRGKRADGWRLPAKQLETQLAQAV
EEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SEHLITAGPQIFQSPTATLIEQSMPQLASISNLESLELIAQCKISEGQLELEIAAKPLAE
HHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEHHHHHH
KLRIKETELAAPFLSFTSPFQIKRRGVEARLIIGGVAPRTNETLIRAIALAHAWAKELRA
HHHCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GTSMTTLAERRSCTLAFIRQRLPLAFLSPSIIEAILAGRQPHDLTLTKLITHPIPLDWDD
CCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCH
QWAELGFSASA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]