| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800256
Identifier: 114800256
GI number: 114800256
Start: 720055
End: 721362
Strand: Reverse
Name: 114800256
Synonym: HNE_0708
Alternate gene names: NA
Gene position: 721362-720055 (Counterclockwise)
Preceding gene: 114799692
Following gene: 114797471
Centisome position: 19.47
GC content: 63.23
Gene sequence:
>1308_bases ATGTCGCACGTATACATAAGCCATTCGGGCAAAGACCCGGACGCCCTGCTCGCATTGCATGAAGCGCTGCGGGCCGCTTC CGTTACGGTATTCTACCCTGGCGAAGACACCTCACGCGAGGAGGCTGATGCGGCGATCGACAAGGCATTTGCCGTCATCG TGCTGGTTTCGGCCGCGGCTGTGCGCTCCAAATGGGTGCGCCAGGATGTCGAAGCGGCCAAGGCGCTTGGCCTCAAACGC ATTCCCTATCAGGTCGACAAGGCGCGTCTGAACGGCTTCTTCAAACAGGAAGTTCAGCCCGATCTGCGCCTCTCCTCCTC GATGCCGGACGGGCTGGCGCAGCTCGTCTCGGAGACGCAGGAAGCTTACCGGAAAAAATGCCCGGTCATTGCGGTCATGA ACCTCAAGGGCGGGGTGGGCAAAACCACCGTTTCCGGGCAGGTGTTCGGCGCCTGGCAGGCGGCCTTTGGCGGGCGCGTC CTGCTGATCGACCTCGACCCGCAATATAACCTCACCCAGACCTTCTATCCGATGGAGCTGGCCGATGCGTCCTCCGCGCA GGACCGCTCGGTGATCTCCCTGTTCGAGCGCTCGCGCCTGCATGCGCGCGACGCGGCCTCCCCGGCAGAAAACTGGCTCG GCCTCACCACTCAGCCGTTTACACCTGCGCCGCGCGATCAGTTCGCACACCCCATTCTTGGCAGCGACGGCCCGCCGGGG CGCCTCGACATCATCTCCGGCCAGTTCGAGATTTCCAAATACGCCTTCTCAGGCGATCCCGACGCGCTCGCCGCCGTGAA GCAGCATTTCCTGCGCTGCGTGGAGCATTACCGCAGCGCGTATGACCTCATCGTGTTTGATACCAACCCCAACGCCACCT TCCTGACGCGCTGCGCGCTGGAAGCAGCCGACCGCGTAATCGCGCCGATGCATGCGGACATTTATTCCCTGCGCGGCGTG CGCCTGCTCAACCAGGTGATCCAGAACCAGGTGGAAGACTATAAACGGCCCGACCTGCGCATCCTGTTCAACGCGGTGAA CCGCAATGAACAATCGACCTTCGAGGCAGATGCCCGCAATGGCGTGTTTGATGGCGCGGCGGGCTTTGCGCTGTCCAAAG CGCTGCTGACCGCCGCCCTGCCCCGCTCGGGGCATTTCGCGGTGAAAGCCCCGCAGGATGGTCAACCTGCGTGGCGGCAG CTCGTCATCCATGCCGGGCGCGGCGGCGGGCTGAAAGCGATCCGCGAAAGCCTGACACAGGTGGCACTCGAAATCCGTGG ACTGAATGACGCGATGACGCGGCATTGA
Upstream 100 bases:
>100_bases TCAAGTTTCACCATAATTTCACTGCAAGAAGGTGGCGGAATCGCGGGTTGGCCCGTTACAAGGCCGATTCAGACAGAAGA TTCATGAGGCGCGGGGCCAC
Downstream 100 bases:
>100_bases TTTAGCCCCCTCCCAGGGGAGAGGGGCTTCAAGGTCAAACGCCCTCAGGTACCCATTTGGTCCGCATCGTGACGAGTTCT TCGGCAGATGACGGGTGCAG
Product: nucleotide binding protein
Products: NA
Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; Chromosome Partitioning ATPase; Chromosome Partitioning Protein; Chromosome Partitioning Protein ParA; Phage ATPase
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSHVYISHSGKDPDALLALHEALRAASVTVFYPGEDTSREEADAAIDKAFAVIVLVSAAAVRSKWVRQDVEAAKALGLKR IPYQVDKARLNGFFKQEVQPDLRLSSSMPDGLAQLVSETQEAYRKKCPVIAVMNLKGGVGKTTVSGQVFGAWQAAFGGRV LLIDLDPQYNLTQTFYPMELADASSAQDRSVISLFERSRLHARDAASPAENWLGLTTQPFTPAPRDQFAHPILGSDGPPG RLDIISGQFEISKYAFSGDPDALAAVKQHFLRCVEHYRSAYDLIVFDTNPNATFLTRCALEAADRVIAPMHADIYSLRGV RLLNQVIQNQVEDYKRPDLRILFNAVNRNEQSTFEADARNGVFDGAAGFALSKALLTAALPRSGHFAVKAPQDGQPAWRQ LVIHAGRGGGLKAIRESLTQVALEIRGLNDAMTRH
Sequences:
>Translated_435_residues MSHVYISHSGKDPDALLALHEALRAASVTVFYPGEDTSREEADAAIDKAFAVIVLVSAAAVRSKWVRQDVEAAKALGLKR IPYQVDKARLNGFFKQEVQPDLRLSSSMPDGLAQLVSETQEAYRKKCPVIAVMNLKGGVGKTTVSGQVFGAWQAAFGGRV LLIDLDPQYNLTQTFYPMELADASSAQDRSVISLFERSRLHARDAASPAENWLGLTTQPFTPAPRDQFAHPILGSDGPPG RLDIISGQFEISKYAFSGDPDALAAVKQHFLRCVEHYRSAYDLIVFDTNPNATFLTRCALEAADRVIAPMHADIYSLRGV RLLNQVIQNQVEDYKRPDLRILFNAVNRNEQSTFEADARNGVFDGAAGFALSKALLTAALPRSGHFAVKAPQDGQPAWRQ LVIHAGRGGGLKAIRESLTQVALEIRGLNDAMTRH >Mature_434_residues SHVYISHSGKDPDALLALHEALRAASVTVFYPGEDTSREEADAAIDKAFAVIVLVSAAAVRSKWVRQDVEAAKALGLKRI PYQVDKARLNGFFKQEVQPDLRLSSSMPDGLAQLVSETQEAYRKKCPVIAVMNLKGGVGKTTVSGQVFGAWQAAFGGRVL LIDLDPQYNLTQTFYPMELADASSAQDRSVISLFERSRLHARDAASPAENWLGLTTQPFTPAPRDQFAHPILGSDGPPGR LDIISGQFEISKYAFSGDPDALAAVKQHFLRCVEHYRSAYDLIVFDTNPNATFLTRCALEAADRVIAPMHADIYSLRGVR LLNQVIQNQVEDYKRPDLRILFNAVNRNEQSTFEADARNGVFDGAAGFALSKALLTAALPRSGHFAVKAPQDGQPAWRQL VIHAGRGGGLKAIRESLTQVALEIRGLNDAMTRH
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47579; Mature: 47448
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVYISHSGKDPDALLALHEALRAASVTVFYPGEDTSREEADAAIDKAFAVIVLVSAAA CCEEEEECCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH VRSKWVRQDVEAAKALGLKRIPYQVDKARLNGFFKQEVQPDLRLSSSMPDGLAQLVSETQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH EAYRKKCPVIAVMNLKGGVGKTTVSGQVFGAWQAAFGGRVLLIDLDPQYNLTQTFYPMEL HHHHHCCCEEEEEECCCCCCCCEECCEEEEHHHHCCCCEEEEEECCCCCCCCCEECCHHH ADASSAQDRSVISLFERSRLHARDAASPAENWLGLTTQPFTPAPRDQFAHPILGSDGPPG CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC RLDIISGQFEISKYAFSGDPDALAAVKQHFLRCVEHYRSAYDLIVFDTNPNATFLTRCAL EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH EAADRVIAPMHADIYSLRGVRLLNQVIQNQVEDYKRPDLRILFNAVNRNEQSTFEADARN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHCCC GVFDGAAGFALSKALLTAALPRSGHFAVKAPQDGQPAWRQLVIHAGRGGGLKAIRESLTQ CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHEEECCCCCCHHHHHHHHHH VALEIRGLNDAMTRH HHHHHCCCCHHHCCC >Mature Secondary Structure SHVYISHSGKDPDALLALHEALRAASVTVFYPGEDTSREEADAAIDKAFAVIVLVSAAA CEEEEECCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH VRSKWVRQDVEAAKALGLKRIPYQVDKARLNGFFKQEVQPDLRLSSSMPDGLAQLVSETQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH EAYRKKCPVIAVMNLKGGVGKTTVSGQVFGAWQAAFGGRVLLIDLDPQYNLTQTFYPMEL HHHHHCCCEEEEEECCCCCCCCEECCEEEEHHHHCCCCEEEEEECCCCCCCCCEECCHHH ADASSAQDRSVISLFERSRLHARDAASPAENWLGLTTQPFTPAPRDQFAHPILGSDGPPG CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC RLDIISGQFEISKYAFSGDPDALAAVKQHFLRCVEHYRSAYDLIVFDTNPNATFLTRCAL EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH EAADRVIAPMHADIYSLRGVRLLNQVIQNQVEDYKRPDLRILFNAVNRNEQSTFEADARN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHCCC GVFDGAAGFALSKALLTAALPRSGHFAVKAPQDGQPAWRQLVIHAGRGGGLKAIRESLTQ CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHEEECCCCCCHHHHHHHHHH VALEIRGLNDAMTRH HHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA