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The map label for this gene is yjgH [H]

Identifier: 114800190

GI number: 114800190

Start: 2473672

End: 2474067

Strand: Reverse

Name: yjgH [H]

Synonym: HNE_2375

Alternate gene names: 114800190

Gene position: 2474067-2473672 (Counterclockwise)

Preceding gene: 114800071

Following gene: 114800137

Centisome position: 66.78

GC content: 57.83

Gene sequence:

>396_bases
ATGATCAAAAACGAACCCATCTTTCCAGCCGACCGCCATGCTCTTTACGAGCAGCACAGGTACTCTGCGGCGATCCGGTC
GGGTGACCTGCTTTTCGTCTCGGGTCAGGTTGGAAGCCGGCCGGATGGTTCACCCGAACCCGATTTCGCCAAACAGGTGC
AATTGGCGTTCGACAATCTTCTGAGCGTGCTGGAAGCGGCAGGCTGTAGCCTGAGCGACATCGTCGATGTCACCACGTTT
CACACCGACCCCGAGGCCCAGTTCGGAACCGTCATGGAGGTTAAGAGCCGCGTCTTCCCTCAGCCGCCCTATCCCAACTG
GACGGCTGTCGGTGTCACCTGGCTTTCGGGTTTTGACTTCGAGATCAAAGTCATTGCCCGCTCTCCTGCAAAGTAG

Upstream 100 bases:

>100_bases
CATTTAAGGCAAGGCATCTGATCGCATTTAGCGGAACCCTTCTTATATGTGCTCCTCATCTCCAAGCGCCCGCGGGGCGA
GCTTCTGATAGGATCGCGAC

Downstream 100 bases:

>100_bases
AATGACCTGAGAGGGGCTCCCTCTAAGGCAGAAGGGAGGCTCCCATGGCCGCAGACGATCAACCCGAACATCCGGTCTAC
AAGCTGGCCGCGCTCGACCA

Product: putative endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MIKNEPIFPADRHALYEQHRYSAAIRSGDLLFVSGQVGSRPDGSPEPDFAKQVQLAFDNLLSVLEAAGCSLSDIVDVTTF
HTDPEAQFGTVMEVKSRVFPQPPYPNWTAVGVTWLSGFDFEIKVIARSPAK

Sequences:

>Translated_131_residues
MIKNEPIFPADRHALYEQHRYSAAIRSGDLLFVSGQVGSRPDGSPEPDFAKQVQLAFDNLLSVLEAAGCSLSDIVDVTTF
HTDPEAQFGTVMEVKSRVFPQPPYPNWTAVGVTWLSGFDFEIKVIARSPAK
>Mature_131_residues
MIKNEPIFPADRHALYEQHRYSAAIRSGDLLFVSGQVGSRPDGSPEPDFAKQVQLAFDNLLSVLEAAGCSLSDIVDVTTF
HTDPEAQFGTVMEVKSRVFPQPPYPNWTAVGVTWLSGFDFEIKVIARSPAK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=131, Percent_Identity=70.9923664122137, Blast_Score=206, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14439; Mature: 14439

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNEPIFPADRHALYEQHRYSAAIRSGDLLFVSGQVGSRPDGSPEPDFAKQVQLAFDNL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LSVLEAAGCSLSDIVDVTTFHTDPEAQFGTVMEVKSRVFPQPPYPNWTAVGVTWLSGFDF
HHHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCE
EIKVIARSPAK
EEEEEECCCCC
>Mature Secondary Structure
MIKNEPIFPADRHALYEQHRYSAAIRSGDLLFVSGQVGSRPDGSPEPDFAKQVQLAFDNL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LSVLEAAGCSLSDIVDVTTFHTDPEAQFGTVMEVKSRVFPQPPYPNWTAVGVTWLSGFDF
HHHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCE
EIKVIARSPAK
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]