| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800135
Identifier: 114800135
GI number: 114800135
Start: 3539742
End: 3541592
Strand: Reverse
Name: 114800135
Synonym: HNE_3395
Alternate gene names: NA
Gene position: 3541592-3539742 (Counterclockwise)
Preceding gene: 114798829
Following gene: 114799317
Centisome position: 95.59
GC content: 65.32
Gene sequence:
>1851_bases ATGACACTGCTCGACCGTCTCTCCACCGGCTGGAAGGCCTGGGTGCTGCTCTTTCTCATCACCTTCGGCGCGGCTGCGCC GGGCGTGTTCCTGCTGCCCGCGCTGGACCGGGACGAGAGCCGCTTTGCGCAGGCCTCCAAGGAGATGCTGGAGGAGGAGA ATTACATCCTGATCCAGTATCAGGACGAGCTGCGCAACAAGAAGCCCGCCGGCATCCACTGGCTGCAGGCAGCCTCCACG GCGATCTTCACCGGCCCGGAAGCCAACGAAATCTGGACCTACCGCATCCCCAGCTGGCTGGGCGCGGCCTTCGGCACGCT CGCCTGCTTCTGGGCAGGTATTCCGCTGATCGGGCGGCGGGCAAGTTTCCTCGGCTCAGCGCTTTTCGGCGCGACCCTGC TGCTGACCTCCGAAGCGCATATCTCCAAGACGGACGGGATGCTGATCTTCCTGACGACGCTGGGGATCGGCGCGCTCGTG CGTCTCTATGTCGAGAAGTCCCAGTCGAAGGCGATGGCGCTCCTCTTCTGGCTTTGTATGGGCACGGCCTTCCTGATCAA GGGACCGGTGACGCCGATGGTTGCGGCCTATGCCGGTGTCGGCGTCTGGCTCTGGGACCGGTGGAAGACCGGCCGGGGCG GGGACTGGTGGCGCGTGCTGCTGTGGTGGCCGGGGCCGGTTATCTTTGTGGTGCTGGTGCTGCCCTGGCTGATCTGGATT CAGATGGCGACAGACGGGCTCTATGTTCAGGGCGCTGTCGGCAAGGATCTCAAGGACAAGTTCGTCGGGGCCTCTGAAGG CCATGGCGGCTGGCCCGGCTATCACCTGCTGCACATTCCGGCCTGGTTCTATCCGGCCAGTCTGCTGCTGATCCCGGCAG TTGTAGCCACCCGCCGCGCGCTGCGGGGCGAAACGCTCAGCGCGCTGGGCCATGGCACGGCGGGGCTGAAATTCCTGCTC GCCTGGGGCGTGCCCACCTGGATCTTCTTTGAACTGCTGCCCACCAAGCTCAGCCATTACATTCTGCCCGCCTATCCCGC GTTTGGTCTCCTTTGCGGCTATGCAGCCGTGCAGTTGATGGACGGCATGAAGATGCCGCTGGCCCGCGGGCTGGGCATGG TCACATTCCTCATCGGGGCGGTGGCCCTGCTGGCGGTCTCCTATCCGGGTGTGACCAGCTATTTCATGGCCGAGACAGCC GGCGATTTCACCACCGTTTCCAAACAGGAAGTGCTGGGCGCCTGGGCCGGTTACCGGGAGTTTCCCCTCTGGCTCTGGGC GGCGGGCTTTGCCCTTGCCGGGCTGGCGCTGGTGGAATCGGCGCGGCTGCGCATGGGCGCCGCGATCACGCTGGCGGTCC TGTCCAGCGTTGCCCTGGGCTGGCATGTGCGCATCTATATGCTGCCCAGCCAGGTCTGGGTGCAGCCAACCGAGACAGCG CGTCTGGCCCTGGAAGATGTGTGCGGCGTTCCGGGGGAGGACGCGGCCTGCAATGTGAAAACGCCCGCGCGCGTCCTGGC GCTGGGCTATGCCGAGCCGTCCTATGTGCTCTCGCTCGGTACGCAGAACCTGCATCCCCCGCAGACGCCGCTGGACCTGC CTGCTGATGAAGCGGCCTATCCGGTCGTCTATCTCCTGAACTTCGAAGACCGTAAGGCTGAGCCGGCCATCGCTGATGTG GCGGCAAGTCTCCGGGAACAGGCCAGGCGCCTGGGCCTCTGCCTGACGGAAGGGGCGCCCTATTACGCGCTCAATTATTC AAACGGCGATCCGGTGCATTTCCGCGCCTGGCGGTTCGACTGGGGCGGGTGTCCCGGCGGGGATCAGCCTTCCAGTTCCA CGTCCCAGTAG
Upstream 100 bases:
>100_bases ATTGTCCGCTTTGCTGAGCTGAATTTAACGTTGGCGGGGCGAGCCCGAATGCCGCCAATTGTGCAAGACGAACGCTCCAA GGGAGGCTAATAAGCGGCCC
Downstream 100 bases:
>100_bases AGATAGTCCATCCAGGTATCGTGCAGGTAGTTGGGCGGGAATTTGCGCCCGATGTCCTGAAGCTGGAAGTTATTCGGGCG GAACGGCCGGTGTTGCAGGT
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MTLLDRLSTGWKAWVLLFLITFGAAAPGVFLLPALDRDESRFAQASKEMLEEENYILIQYQDELRNKKPAGIHWLQAAST AIFTGPEANEIWTYRIPSWLGAAFGTLACFWAGIPLIGRRASFLGSALFGATLLLTSEAHISKTDGMLIFLTTLGIGALV RLYVEKSQSKAMALLFWLCMGTAFLIKGPVTPMVAAYAGVGVWLWDRWKTGRGGDWWRVLLWWPGPVIFVVLVLPWLIWI QMATDGLYVQGAVGKDLKDKFVGASEGHGGWPGYHLLHIPAWFYPASLLLIPAVVATRRALRGETLSALGHGTAGLKFLL AWGVPTWIFFELLPTKLSHYILPAYPAFGLLCGYAAVQLMDGMKMPLARGLGMVTFLIGAVALLAVSYPGVTSYFMAETA GDFTTVSKQEVLGAWAGYREFPLWLWAAGFALAGLALVESARLRMGAAITLAVLSSVALGWHVRIYMLPSQVWVQPTETA RLALEDVCGVPGEDAACNVKTPARVLALGYAEPSYVLSLGTQNLHPPQTPLDLPADEAAYPVVYLLNFEDRKAEPAIADV AASLREQARRLGLCLTEGAPYYALNYSNGDPVHFRAWRFDWGGCPGGDQPSSSTSQ
Sequences:
>Translated_616_residues MTLLDRLSTGWKAWVLLFLITFGAAAPGVFLLPALDRDESRFAQASKEMLEEENYILIQYQDELRNKKPAGIHWLQAAST AIFTGPEANEIWTYRIPSWLGAAFGTLACFWAGIPLIGRRASFLGSALFGATLLLTSEAHISKTDGMLIFLTTLGIGALV RLYVEKSQSKAMALLFWLCMGTAFLIKGPVTPMVAAYAGVGVWLWDRWKTGRGGDWWRVLLWWPGPVIFVVLVLPWLIWI QMATDGLYVQGAVGKDLKDKFVGASEGHGGWPGYHLLHIPAWFYPASLLLIPAVVATRRALRGETLSALGHGTAGLKFLL AWGVPTWIFFELLPTKLSHYILPAYPAFGLLCGYAAVQLMDGMKMPLARGLGMVTFLIGAVALLAVSYPGVTSYFMAETA GDFTTVSKQEVLGAWAGYREFPLWLWAAGFALAGLALVESARLRMGAAITLAVLSSVALGWHVRIYMLPSQVWVQPTETA RLALEDVCGVPGEDAACNVKTPARVLALGYAEPSYVLSLGTQNLHPPQTPLDLPADEAAYPVVYLLNFEDRKAEPAIADV AASLREQARRLGLCLTEGAPYYALNYSNGDPVHFRAWRFDWGGCPGGDQPSSSTSQ >Mature_615_residues TLLDRLSTGWKAWVLLFLITFGAAAPGVFLLPALDRDESRFAQASKEMLEEENYILIQYQDELRNKKPAGIHWLQAASTA IFTGPEANEIWTYRIPSWLGAAFGTLACFWAGIPLIGRRASFLGSALFGATLLLTSEAHISKTDGMLIFLTTLGIGALVR LYVEKSQSKAMALLFWLCMGTAFLIKGPVTPMVAAYAGVGVWLWDRWKTGRGGDWWRVLLWWPGPVIFVVLVLPWLIWIQ MATDGLYVQGAVGKDLKDKFVGASEGHGGWPGYHLLHIPAWFYPASLLLIPAVVATRRALRGETLSALGHGTAGLKFLLA WGVPTWIFFELLPTKLSHYILPAYPAFGLLCGYAAVQLMDGMKMPLARGLGMVTFLIGAVALLAVSYPGVTSYFMAETAG DFTTVSKQEVLGAWAGYREFPLWLWAAGFALAGLALVESARLRMGAAITLAVLSSVALGWHVRIYMLPSQVWVQPTETAR LALEDVCGVPGEDAACNVKTPARVLALGYAEPSYVLSLGTQNLHPPQTPLDLPADEAAYPVVYLLNFEDRKAEPAIADVA ASLREQARRLGLCLTEGAPYYALNYSNGDPVHFRAWRFDWGGCPGGDQPSSSTSQ
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 67221; Mature: 67090
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDRLSTGWKAWVLLFLITFGAAAPGVFLLPALDRDESRFAQASKEMLEEENYILIQY CCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE QDELRNKKPAGIHWLQAASTAIFTGPEANEIWTYRIPSWLGAAFGTLACFWAGIPLIGRR EHHHCCCCCCCEEHHHHCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCHH ASFLGSALFGATLLLTSEAHISKTDGMLIFLTTLGIGALVRLYVEKSQSKAMALLFWLCM HHHHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GTAFLIKGPVTPMVAAYAGVGVWLWDRWKTGRGGDWWRVLLWWPGPVIFVVLVLPWLIWI HHHEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH QMATDGLYVQGAVGKDLKDKFVGASEGHGGWPGYHLLHIPAWFYPASLLLIPAVVATRRA HHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH LRGETLSALGHGTAGLKFLLAWGVPTWIFFELLPTKLSHYILPAYPAFGLLCGYAAVQLM HCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DGMKMPLARGLGMVTFLIGAVALLAVSYPGVTSYFMAETAGDFTTVSKQEVLGAWAGYRE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHH FPLWLWAAGFALAGLALVESARLRMGAAITLAVLSSVALGWHVRIYMLPSQVWVQPTETA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHEECCCHHH RLALEDVCGVPGEDAACNVKTPARVLALGYAEPSYVLSLGTQNLHPPQTPLDLPADEAAY HHHHHHHCCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCC PVVYLLNFEDRKAEPAIADVAASLREQARRLGLCLTEGAPYYALNYSNGDPVHFRAWRFD CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCCEEEEEEEEE WGGCPGGDQPSSSTSQ CCCCCCCCCCCCCCCC >Mature Secondary Structure TLLDRLSTGWKAWVLLFLITFGAAAPGVFLLPALDRDESRFAQASKEMLEEENYILIQY CCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE QDELRNKKPAGIHWLQAASTAIFTGPEANEIWTYRIPSWLGAAFGTLACFWAGIPLIGRR EHHHCCCCCCCEEHHHHCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCHH ASFLGSALFGATLLLTSEAHISKTDGMLIFLTTLGIGALVRLYVEKSQSKAMALLFWLCM HHHHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GTAFLIKGPVTPMVAAYAGVGVWLWDRWKTGRGGDWWRVLLWWPGPVIFVVLVLPWLIWI HHHEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH QMATDGLYVQGAVGKDLKDKFVGASEGHGGWPGYHLLHIPAWFYPASLLLIPAVVATRRA HHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH LRGETLSALGHGTAGLKFLLAWGVPTWIFFELLPTKLSHYILPAYPAFGLLCGYAAVQLM HCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DGMKMPLARGLGMVTFLIGAVALLAVSYPGVTSYFMAETAGDFTTVSKQEVLGAWAGYRE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHH FPLWLWAAGFALAGLALVESARLRMGAAITLAVLSSVALGWHVRIYMLPSQVWVQPTETA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHEECCCHHH RLALEDVCGVPGEDAACNVKTPARVLALGYAEPSYVLSLGTQNLHPPQTPLDLPADEAAY HHHHHHHCCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCC PVVYLLNFEDRKAEPAIADVAASLREQARRLGLCLTEGAPYYALNYSNGDPVHFRAWRFD CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCCEEEEEEEEE WGGCPGGDQPSSSTSQ CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]