Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800065

Identifier: 114800065

GI number: 114800065

Start: 3024688

End: 3026091

Strand: Reverse

Name: 114800065

Synonym: HNE_2869

Alternate gene names: NA

Gene position: 3026091-3024688 (Counterclockwise)

Preceding gene: 114797875

Following gene: 114800106

Centisome position: 81.68

GC content: 66.24

Gene sequence:

>1404_bases
ATGGGTGGGCTTGCCCTTCTGGCCCTGCCTTTGCTTGTCTGGTGGGGCATCTACCAATCCCCGCAGAGCGCTGTAAACCT
CCAAGCGCGGCTTGAGGCGCGCGCCAAGGCGGCGCTGACAACAGGCGGCGCCGATTGGGCCAGCGTCAGCATGGAAGGCC
AGCGGGCAGTGCTGACCGGGGCGGCCCCTTCCAACGATGCTGTGACCGAGGCGGCACGCCTCGTGCGGCGCAGCAGTGGG
GCGGGCGGGGTCATCTTTGGCGGCGTCACGCTGGTCGAGAGCCGCGCCGATGCCGCGCCGCCCATTTCCCCTTATGTCTG
GCGCGCAACCAAGACCGGCGAAGGCCGCATCGTGCTGTCTGGAAATGTGCCGTCCAAATCCATCCAGGCGAGCCTGATCG
AGGATGCGCGCCTTGTGGGCCGCGCGGCGGTGGACAATGAAATGAAACTCGCCGCCGGAGCCCCGGCCGGCAACTTCCAG
GGGCTGGCCCGGTTTGCGCTGAGCCAACTCGCGCAGCTGGAGGAGGGGGAGGTGACCATCACCGATCACCGCCTGGTGCT
GAGAGGCGAGGTTGCCGATCCGGAGCTGCGCACGCAGATCATGGCAGCGGTGGCCGGGGTCGCGGCGCCCTTTCGGGGAG
AGCCGGTTCTGTCAGGCGACATCCGCTGGCGGGCCGAGCTGTCCGGAAATGTCCTGACTTTATCGGGAACGGTGGCCGAT
GAGGACGAGCGGCGTCAGCTGCTGGCGGCCGCAGAAGCGGGCTTTGACGGCGAGATTGCCGATAGGATGACACTTGGCGG
ACCCGTCGCAGAAGGATGGCTCGAGGGCGCGCTGGCAGGCCTGCCCGCGTTCACGCAGTTCAGCTCCGGAGAGATGGCCT
TTGATGAGGCGGCCGGCGTGTTCCTGTTTGACGGGACGGCCAGCGCCAGCACACTTTACTATCTGGCAAACGACATGGCG
CGCGGCGCGGGGCGCTGGAAGACCGTCATGGGCGCCGAAATGTCCGGATTTGTCCCGGACGTGTCCGCAGATGTCTCGCC
CGCAGTGGCCGGTGACGCAGTAATGCCGTGCGAGGACCAGCTTCAGGCTGCACTTGCCTCCGGCGACATCCGGTTTGCGG
GCGGCGGGGCCACCATCGCCCGCGAAAGCGGCCCGCTGCTCGACAAGATTGTCGGGATCGCCCGCAACTGCGACAGAGAC
ACCGGTTTTGAAATTGTCGCTGACAGCAGTGTTCAGGCCTCCGAACTGGCCGATTTTCTCACCGCAGCAGGGGTGCCGCG
CGACCGCGTGGCTGCTATCACCTATGGTCCCGCCTCCGGGCAGGGGGCTAATCAGACAGTCGACACAGGCGGAGACATGC
TCCGTCCTTTACAGATCAGAATTGTGGAACGGAGCGGCGAATGA

Upstream 100 bases:

>100_bases
TGCGGTCTGGTAAGGGTTAGGGCATGCCTCGCCCGAGAGGGTGCTGTGGGGGTACTGGTTTTGGGAGGTCAGCGACGTGT
TGCGCCTGCTTGACTACCTT

Downstream 100 bases:

>100_bases
CCTGGCTTGTGGCACATATGTGGATCGCCCTGGCCGGCGCGGCGCTGGTGGCTTTGCTGCTGGGCTGGTCGCTGCGTGGC
ATGCTGCTGCTGGGCAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; Outer Membrane Protein

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MGGLALLALPLLVWWGIYQSPQSAVNLQARLEARAKAALTTGGADWASVSMEGQRAVLTGAAPSNDAVTEAARLVRRSSG
AGGVIFGGVTLVESRADAAPPISPYVWRATKTGEGRIVLSGNVPSKSIQASLIEDARLVGRAAVDNEMKLAAGAPAGNFQ
GLARFALSQLAQLEEGEVTITDHRLVLRGEVADPELRTQIMAAVAGVAAPFRGEPVLSGDIRWRAELSGNVLTLSGTVAD
EDERRQLLAAAEAGFDGEIADRMTLGGPVAEGWLEGALAGLPAFTQFSSGEMAFDEAAGVFLFDGTASASTLYYLANDMA
RGAGRWKTVMGAEMSGFVPDVSADVSPAVAGDAVMPCEDQLQAALASGDIRFAGGGATIARESGPLLDKIVGIARNCDRD
TGFEIVADSSVQASELADFLTAAGVPRDRVAAITYGPASGQGANQTVDTGGDMLRPLQIRIVERSGE

Sequences:

>Translated_467_residues
MGGLALLALPLLVWWGIYQSPQSAVNLQARLEARAKAALTTGGADWASVSMEGQRAVLTGAAPSNDAVTEAARLVRRSSG
AGGVIFGGVTLVESRADAAPPISPYVWRATKTGEGRIVLSGNVPSKSIQASLIEDARLVGRAAVDNEMKLAAGAPAGNFQ
GLARFALSQLAQLEEGEVTITDHRLVLRGEVADPELRTQIMAAVAGVAAPFRGEPVLSGDIRWRAELSGNVLTLSGTVAD
EDERRQLLAAAEAGFDGEIADRMTLGGPVAEGWLEGALAGLPAFTQFSSGEMAFDEAAGVFLFDGTASASTLYYLANDMA
RGAGRWKTVMGAEMSGFVPDVSADVSPAVAGDAVMPCEDQLQAALASGDIRFAGGGATIARESGPLLDKIVGIARNCDRD
TGFEIVADSSVQASELADFLTAAGVPRDRVAAITYGPASGQGANQTVDTGGDMLRPLQIRIVERSGE
>Mature_466_residues
GGLALLALPLLVWWGIYQSPQSAVNLQARLEARAKAALTTGGADWASVSMEGQRAVLTGAAPSNDAVTEAARLVRRSSGA
GGVIFGGVTLVESRADAAPPISPYVWRATKTGEGRIVLSGNVPSKSIQASLIEDARLVGRAAVDNEMKLAAGAPAGNFQG
LARFALSQLAQLEEGEVTITDHRLVLRGEVADPELRTQIMAAVAGVAAPFRGEPVLSGDIRWRAELSGNVLTLSGTVADE
DERRQLLAAAEAGFDGEIADRMTLGGPVAEGWLEGALAGLPAFTQFSSGEMAFDEAAGVFLFDGTASASTLYYLANDMAR
GAGRWKTVMGAEMSGFVPDVSADVSPAVAGDAVMPCEDQLQAALASGDIRFAGGGATIARESGPLLDKIVGIARNCDRDT
GFEIVADSSVQASELADFLTAAGVPRDRVAAITYGPASGQGANQTVDTGGDMLRPLQIRIVERSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48257; Mature: 48126

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLALLALPLLVWWGIYQSPQSAVNLQARLEARAKAALTTGGADWASVSMEGQRAVLTG
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEC
AAPSNDAVTEAARLVRRSSGAGGVIFGGVTLVESRADAAPPISPYVWRATKTGEGRIVLS
CCCCCHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE
GNVPSKSIQASLIEDARLVGRAAVDNEMKLAAGAPAGNFQGLARFALSQLAQLEEGEVTI
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
TDHRLVLRGEVADPELRTQIMAAVAGVAAPFRGEPVLSGDIRWRAELSGNVLTLSGTVAD
ECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEECCCCC
EDERRQLLAAAEAGFDGEIADRMTLGGPVAEGWLEGALAGLPAFTQFSSGEMAFDEAAGV
CHHHHHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHCCCCHHCCCCCCEEHHCCCCE
FLFDGTASASTLYYLANDMARGAGRWKTVMGAEMSGFVPDVSADVSPAVAGDAVMPCEDQ
EEECCCCCCCEEEEHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LQAALASGDIRFAGGGATIARESGPLLDKIVGIARNCDRDTGFEIVADSSVQASELADFL
HHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
TAAGVPRDRVAAITYGPASGQGANQTVDTGGDMLRPLQIRIVERSGE
HHCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
GGLALLALPLLVWWGIYQSPQSAVNLQARLEARAKAALTTGGADWASVSMEGQRAVLTG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEC
AAPSNDAVTEAARLVRRSSGAGGVIFGGVTLVESRADAAPPISPYVWRATKTGEGRIVLS
CCCCCHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE
GNVPSKSIQASLIEDARLVGRAAVDNEMKLAAGAPAGNFQGLARFALSQLAQLEEGEVTI
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
TDHRLVLRGEVADPELRTQIMAAVAGVAAPFRGEPVLSGDIRWRAELSGNVLTLSGTVAD
ECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEECCCCC
EDERRQLLAAAEAGFDGEIADRMTLGGPVAEGWLEGALAGLPAFTQFSSGEMAFDEAAGV
CHHHHHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHCCCCHHCCCCCCEEHHCCCCE
FLFDGTASASTLYYLANDMARGAGRWKTVMGAEMSGFVPDVSADVSPAVAGDAVMPCEDQ
EEECCCCCCCEEEEHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LQAALASGDIRFAGGGATIARESGPLLDKIVGIARNCDRDTGFEIVADSSVQASELADFL
HHHHHHCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
TAAGVPRDRVAAITYGPASGQGANQTVDTGGDMLRPLQIRIVERSGE
HHCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA