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The map label for this gene is 114800062

Identifier: 114800062

GI number: 114800062

Start: 1172199

End: 1172678

Strand: Reverse

Name: 114800062

Synonym: HNE_1159

Alternate gene names: NA

Gene position: 1172678-1172199 (Counterclockwise)

Preceding gene: 114799566

Following gene: 114799994

Centisome position: 31.65

GC content: 61.88

Gene sequence:

>480_bases
ATGGCGCGTCTTTCTCTTGTGGCCGCAGGCCTTCTTGCCGCACTGCCGCTGACAGCCTGTCTGAGCCCGGCGCGGGATTT
CCACGGCTACATCGCAGATGAAGTCCAGCCTATCGACATCAAGCCGGGCGATGACACCCGCTCGACCGTGCTGGCCCAGC
TCGGCTCGCCTTCCACCGAAGGTCTCTTCGATACCAATATCTGGTTCTATTATTCCGACATCCAGGAACGCTTCGCCTTC
TACCGGCCCAAGGTGGTCGAGCGCAGCATCATTGCGATCAGTTTCAGCGAAGATGACGCGGTCGATGAGGTTGTGAAGTA
CAGCGTCACCGACGGCCAGATCGTCTCCTATGCCTCGCGCGAGACGCCCACACGTGGCCGCGAACTTGGCTTCTGGGAAC
AGATCTTCGGCACCGTGGGCGCCGTCCGCCTGCCCAACACGGATGAAACGACACCGGGCAACCCGACCGGCCGCCGCTAG

Upstream 100 bases:

>100_bases
GAACCAGCTGCCTGAAAAAGCGATCAACCCTGTACTCCAATGCTTGCCAAGCCCGGTTACCTGTCGCTAGGTCTGCGGTC
AAAGCCTATAGGAGCCATAC

Downstream 100 bases:

>100_bases
GCGTTCATCCAATACCGGAATCCAAAGGCCGCAGCTGGAAACCCGGCTGCGGCCTTCTTCGTTCAGTCGGTCAATCGATG
GCTCCCAGTGGCCACCGGGG

Product: SmpA/OmlA family protein

Products: NA

Alternate protein names: Lipoprotein SmpA/OmlA Family; SmpA/OmlA Domain Protein; SmpA/OmlA; Outer Membrane Protein; Small Protein A; Lipoprotein SmpA/OmlA Family Protein; SmpA/OmlA Family Outer Membrane Protein; SmpA/OmlA Family Lipoprotein; Smpa/Omla Domain-Containing Protein; SmpA Protein; SmpA/OmlA Family Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MARLSLVAAGLLAALPLTACLSPARDFHGYIADEVQPIDIKPGDDTRSTVLAQLGSPSTEGLFDTNIWFYYSDIQERFAF
YRPKVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASRETPTRGRELGFWEQIFGTVGAVRLPNTDETTPGNPTGRR

Sequences:

>Translated_159_residues
MARLSLVAAGLLAALPLTACLSPARDFHGYIADEVQPIDIKPGDDTRSTVLAQLGSPSTEGLFDTNIWFYYSDIQERFAF
YRPKVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASRETPTRGRELGFWEQIFGTVGAVRLPNTDETTPGNPTGRR
>Mature_158_residues
ARLSLVAAGLLAALPLTACLSPARDFHGYIADEVQPIDIKPGDDTRSTVLAQLGSPSTEGLFDTNIWFYYSDIQERFAFY
RPKVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASRETPTRGRELGFWEQIFGTVGAVRLPNTDETTPGNPTGRR

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17522; Mature: 17391

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSLVAAGLLAALPLTACLSPARDFHGYIADEVQPIDIKPGDDTRSTVLAQLGSPSTE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCHHHHHHHHCCCCCCC
GLFDTNIWFYYSDIQERFAFYRPKVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASR
CEEECCEEEEEHHHHHHHHHHCCCHHCCEEEEEEECCCHHHHHHHHHCCCCCCEEEECCC
ETPTRGRELGFWEQIFGTVGAVRLPNTDETTPGNPTGRR
CCCCCCCCCCHHHHHHHHHCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLSLVAAGLLAALPLTACLSPARDFHGYIADEVQPIDIKPGDDTRSTVLAQLGSPSTE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCHHHHHHHHCCCCCCC
GLFDTNIWFYYSDIQERFAFYRPKVVERSIIAISFSEDDAVDEVVKYSVTDGQIVSYASR
CEEECCEEEEEHHHHHHHHHHCCCHHCCEEEEEEECCCHHHHHHHHHCCCCCCEEEECCC
ETPTRGRELGFWEQIFGTVGAVRLPNTDETTPGNPTGRR
CCCCCCCCCCHHHHHHHHHCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA