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The map label for this gene is ytfE [C]

Identifier: 114800024

GI number: 114800024

Start: 1571347

End: 1571835

Strand: Reverse

Name: ytfE [C]

Synonym: HNE_1539

Alternate gene names: 114800024

Gene position: 1571835-1571347 (Counterclockwise)

Preceding gene: 114798557

Following gene: 114797066

Centisome position: 42.42

GC content: 59.1

Gene sequence:

>489_bases
ATGACAGATGCCGCACCGATTCAGAACGCCTCGGACCTGACTCGATATATCGAGACGCGCTATCATCAGACGCATCGTGA
GCAGCTGCCAGTCCTTGCCGAACTTGCCGCAAAGGTCGAGCGCGTGCATGCAGGGCATGAGCGTGCGCCGAAGGGGCTCC
GCGAACTCCTGCGACAAATGATCGGTGAGTTGGAAGTACACATGAAGAAGGAGGAGTTGATCCTCTTTCCAGCAATTCGG
GCGGGCGGCACCCCCGGGCTCGCCCACCCCATCGCCGTCATGCGTGCCGATCATGATGATCACGGACGGGCAATCGCGGC
CATCGCGCAGCTCACGTATAACCTGGAACTGCCCGAGGGCGCATGCGGAACCTGGACCCGCCTGTATGCCGGTCTCGCGG
AGTTCATTACGGACCTGACTTCGCATATTCGTCTGGAAAATGAGGTGCTCTTCCCGCAATTTGACCAGGTCAACCATACC
GATACCTGA

Upstream 100 bases:

>100_bases
CGCGGGCAGAACGCATTGCACGTTCACTTTTAAGCGCCGTTGAAGAATCGCAAACAGTTCCCAAGCCGCTTTCGGATGGC
GCAGACCAAAGGACACCCCC

Downstream 100 bases:

>100_bases
CGGAGTCCGCCATTGAACGATCCCAAAGACCCGGGAGCACGCTACGCATCGCCTCCCTGCATGGCGGGAGAGATGACACC
GGATTATTTCGACACGTGTG

Product: hemerythrin HHE cation binding domain-containing protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTDAAPIQNASDLTRYIETRYHQTHREQLPVLAELAAKVERVHAGHERAPKGLRELLRQMIGELEVHMKKEELILFPAIR
AGGTPGLAHPIAVMRADHDDHGRAIAAIAQLTYNLELPEGACGTWTRLYAGLAEFITDLTSHIRLENEVLFPQFDQVNHT
DT

Sequences:

>Translated_162_residues
MTDAAPIQNASDLTRYIETRYHQTHREQLPVLAELAAKVERVHAGHERAPKGLRELLRQMIGELEVHMKKEELILFPAIR
AGGTPGLAHPIAVMRADHDDHGRAIAAIAQLTYNLELPEGACGTWTRLYAGLAEFITDLTSHIRLENEVLFPQFDQVNHT
DT
>Mature_161_residues
TDAAPIQNASDLTRYIETRYHQTHREQLPVLAELAAKVERVHAGHERAPKGLRELLRQMIGELEVHMKKEELILFPAIRA
GGTPGLAHPIAVMRADHDDHGRAIAAIAQLTYNLELPEGACGTWTRLYAGLAEFITDLTSHIRLENEVLFPQFDQVNHTD
T

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=150, Percent_Identity=46, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 18175; Mature: 18044

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAAPIQNASDLTRYIETRYHQTHREQLPVLAELAAKVERVHAGHERAPKGLRELLRQM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IGELEVHMKKEELILFPAIRAGGTPGLAHPIAVMRADHDDHGRAIAAIAQLTYNLELPEG
HHHHHHHCCCCCEEEEECHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
ACGTWTRLYAGLAEFITDLTSHIRLENEVLFPQFDQVNHTDT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDAAPIQNASDLTRYIETRYHQTHREQLPVLAELAAKVERVHAGHERAPKGLRELLRQM
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IGELEVHMKKEELILFPAIRAGGTPGLAHPIAVMRADHDDHGRAIAAIAQLTYNLELPEG
HHHHHHHCCCCCEEEEECHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
ACGTWTRLYAGLAEFITDLTSHIRLENEVLFPQFDQVNHTDT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA