Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800004

Identifier: 114800004

GI number: 114800004

Start: 1041587

End: 1042789

Strand: Direct

Name: 114800004

Synonym: HNE_1031

Alternate gene names: NA

Gene position: 1041587-1042789 (Clockwise)

Preceding gene: 114797928

Following gene: 114800536

Centisome position: 28.11

GC content: 63.26

Gene sequence:

>1203_bases
ATGGCCGCCAGCGTACAGGGAAAGTGCGACCCCAAATTCGCAAAAGTCCGTGAAGAGTTCGAGCGCAACTTCGCCGCGCG
CGGAGAAGTCGGCGCCTCGGTCTGCCTCTCGGTAGACGGTCAGGTCGCGGTCGATCTCTGGGGCGGCATGGCCAATCCGG
AGACCAGCGATCCCTGGCAGGAAGACACGGTCTCCATCGTCTTCTCCTGCACCAAGGCCGCCGTCGCCACCTGCGCCCAC
ATCCTGATCGATCAGGGCAAGCTCAATCCGAGCGCGCTGGTGAAGGATTACTGGCCGGAATTCGCCAAGGCCGGCAAAGA
GAAAACCACCGTCCAGATGATGCTCAACCATGAGAGCGCGCTGCCCACCCTGCGCGACCAGGTAAAGCCCGGCGGCTTTG
GCGACTGGGATTACATGATCAAACGGATGGAAGACGAGGAAGCCTTCTGGGAGCCGGGCACGCGCAACGGCTATCACATG
GTCAATTTCGGCTGGACGGTCGGCGAACTTGTCCGCCGCGTCTCGGGCAAATCGCTCGGCACGTTCTTCCGCGAGGAAGT
GGCGGAAAAAACCGGCGCAAAATTCTGGATCGGCCTGCCGGAAAGCGAAAACGTCCACATCGCCCCCATCCGCATGTATG
AGCCAAAGCCCACCGATCAGCCTACGGAATTCACCATCGCGCTGATGGGCGACCCCAACTCTATCCAGCACAAATCCTTC
CTCAACACCGGCGGGTGGGACTGGAACAACCGCCAGAACCAGGCCGCTGAAGTCGGCGGCGGCGGCGGGCTCTCCAATGC
GCGCGGACAGGTCAAGTGGTATACGGAGCTTGCCACAAACAGTGGCAAACTCGTCTCGGCAGACCGCCTGGCCGCCATGG
GCCGCGTCACTACCGCCACCCAGCGCGACGCAACCCTGCTCATCCCCTCGCGCTTTGCCTCGGGCTATATGAAATCCATG
GACAATCGCGGCCTGAACCTTGGTCCCGGCACCAGCGCCATCATGGGCGAGGCGGCCTTCGGCCATGTTGGCGCCGGCGG
CTCCATCGGCTTTGCAGACCCCGAAGCGGGCCTCGCTTTCAGCTACACCATGAACCAGATGGGCGGCGGCCTCCTGCTGA
ATGAGCGCGGTCAGAGCCTCATCGACGCGGCCTATCAGGCGCTCGGCTACCGCACCAACGCGCCGGGGTCCTGGGTGCGC
TAA

Upstream 100 bases:

>100_bases
TCCCATCCGGGGCGGCCCTTTTGCTTTCCCCACCGTAACCACTCCCCAATCCTTCCAAACCCGCTAACCTCGCCGCAAAA
GAACCTCGGGAGGAAATCAG

Downstream 100 bases:

>100_bases
AGGTCGCCCGGCGGCGGCGCCCGGTCTGTTGGTATAAGGACCATGAACACCGTCGCCGCCACGGCCGCCAGCGCAACGCC
GATCACAAGCGGCTGAGAAA

Product: putative esterase

Products: NA

Alternate protein names: Esterase; Carboxylesterase; Beta-Lactamase Class C; Esterase/Lipase LipP; Esterase A; Esterase/Lipase/Beta-Lactamase; Lactone Hydrolase; Lipase LipE; Beta-Lactamase Protein; Esterase LipL; Lipase LipD; Lipase/Esterase/Beta-Lactamase; Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Esterase/Lipase; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MAASVQGKCDPKFAKVREEFERNFAARGEVGASVCLSVDGQVAVDLWGGMANPETSDPWQEDTVSIVFSCTKAAVATCAH
ILIDQGKLNPSALVKDYWPEFAKAGKEKTTVQMMLNHESALPTLRDQVKPGGFGDWDYMIKRMEDEEAFWEPGTRNGYHM
VNFGWTVGELVRRVSGKSLGTFFREEVAEKTGAKFWIGLPESENVHIAPIRMYEPKPTDQPTEFTIALMGDPNSIQHKSF
LNTGGWDWNNRQNQAAEVGGGGGLSNARGQVKWYTELATNSGKLVSADRLAAMGRVTTATQRDATLLIPSRFASGYMKSM
DNRGLNLGPGTSAIMGEAAFGHVGAGGSIGFADPEAGLAFSYTMNQMGGGLLLNERGQSLIDAAYQALGYRTNAPGSWVR

Sequences:

>Translated_400_residues
MAASVQGKCDPKFAKVREEFERNFAARGEVGASVCLSVDGQVAVDLWGGMANPETSDPWQEDTVSIVFSCTKAAVATCAH
ILIDQGKLNPSALVKDYWPEFAKAGKEKTTVQMMLNHESALPTLRDQVKPGGFGDWDYMIKRMEDEEAFWEPGTRNGYHM
VNFGWTVGELVRRVSGKSLGTFFREEVAEKTGAKFWIGLPESENVHIAPIRMYEPKPTDQPTEFTIALMGDPNSIQHKSF
LNTGGWDWNNRQNQAAEVGGGGGLSNARGQVKWYTELATNSGKLVSADRLAAMGRVTTATQRDATLLIPSRFASGYMKSM
DNRGLNLGPGTSAIMGEAAFGHVGAGGSIGFADPEAGLAFSYTMNQMGGGLLLNERGQSLIDAAYQALGYRTNAPGSWVR
>Mature_399_residues
AASVQGKCDPKFAKVREEFERNFAARGEVGASVCLSVDGQVAVDLWGGMANPETSDPWQEDTVSIVFSCTKAAVATCAHI
LIDQGKLNPSALVKDYWPEFAKAGKEKTTVQMMLNHESALPTLRDQVKPGGFGDWDYMIKRMEDEEAFWEPGTRNGYHMV
NFGWTVGELVRRVSGKSLGTFFREEVAEKTGAKFWIGLPESENVHIAPIRMYEPKPTDQPTEFTIALMGDPNSIQHKSFL
NTGGWDWNNRQNQAAEVGGGGGLSNARGQVKWYTELATNSGKLVSADRLAAMGRVTTATQRDATLLIPSRFASGYMKSMD
NRGLNLGPGTSAIMGEAAFGHVGAGGSIGFADPEAGLAFSYTMNQMGGGLLLNERGQSLIDAAYQALGYRTNAPGSWVR

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17538001, Length=401, Percent_Identity=30.1745635910224, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17535191, Length=386, Percent_Identity=30.0518134715026, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI71983659, Length=382, Percent_Identity=30.1047120418848, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI71983666, Length=210, Percent_Identity=38.0952380952381, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17538474, Length=411, Percent_Identity=27.7372262773723, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17535177, Length=390, Percent_Identity=29.4871794871795, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI71990590, Length=386, Percent_Identity=25.3886010362694, Blast_Score=101, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43369; Mature: 43238

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASVQGKCDPKFAKVREEFERNFAARGEVGASVCLSVDGQVAVDLWGGMANPETSDPWQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCC
EDTVSIVFSCTKAAVATCAHILIDQGKLNPSALVKDYWPEFAKAGKEKTTVQMMLNHESA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
LPTLRDQVKPGGFGDWDYMIKRMEDEEAFWEPGTRNGYHMVNFGWTVGELVRRVSGKSLG
CCHHHHHCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH
TFFREEVAEKTGAKFWIGLPESENVHIAPIRMYEPKPTDQPTEFTIALMGDPNSIQHKSF
HHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHH
LNTGGWDWNNRQNQAAEVGGGGGLSNARGQVKWYTELATNSGKLVSADRLAAMGRVTTAT
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHCCCEECC
QRDATLLIPSRFASGYMKSMDNRGLNLGPGTSAIMGEAAFGHVGAGGSIGFADPEAGLAF
CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCEEE
SYTMNQMGGGLLLNERGQSLIDAAYQALGYRTNAPGSWVR
EEEHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AASVQGKCDPKFAKVREEFERNFAARGEVGASVCLSVDGQVAVDLWGGMANPETSDPWQ
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCC
EDTVSIVFSCTKAAVATCAHILIDQGKLNPSALVKDYWPEFAKAGKEKTTVQMMLNHESA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
LPTLRDQVKPGGFGDWDYMIKRMEDEEAFWEPGTRNGYHMVNFGWTVGELVRRVSGKSLG
CCHHHHHCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH
TFFREEVAEKTGAKFWIGLPESENVHIAPIRMYEPKPTDQPTEFTIALMGDPNSIQHKSF
HHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHH
LNTGGWDWNNRQNQAAEVGGGGGLSNARGQVKWYTELATNSGKLVSADRLAAMGRVTTAT
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHCCCEECC
QRDATLLIPSRFASGYMKSMDNRGLNLGPGTSAIMGEAAFGHVGAGGSIGFADPEAGLAF
CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCEEE
SYTMNQMGGGLLLNERGQSLIDAAYQALGYRTNAPGSWVR
EEEHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA