| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ampH [C]
Identifier: 114799990
GI number: 114799990
Start: 410702
End: 411877
Strand: Reverse
Name: ampH [C]
Synonym: HNE_0411
Alternate gene names: 114799990
Gene position: 411877-410702 (Counterclockwise)
Preceding gene: 114800336
Following gene: 114798537
Centisome position: 11.12
GC content: 64.88
Gene sequence:
>1176_bases ATGACCCGGATTTTCGCGCTTTTGCTGGGCTTTTTCTCCCTGACAGCCCCCGCCATTGCCCAGGGCATCGACTATGAGCG TCTGGACCAGCGGTTAACCCAGCTTTCGCGGGAAGACGACATGGTCGGCCTTGCCGTTGCCGTGATCGAAGGGGGCGAGA TCACCTTCGCGCGGGGCTATGGCGTCACCGCAGAGGGCGAAGGCCCGGTGACGCGCGATACGGTCTTCCGCTGGGCCTCC CTGTCGAAGGGCGTGGCGACCAGCCTTGTTACCAAACTGGCGATGGAGGGGCGGTTTTCCCTTTCCGACACGCTCTCCAG CTTCAAGACCAGCCTGCGCCTGCCGGGCGGCGGCGAACAGACGGCCACTCTGGAAGACCTGATGGCCCACAAGGTGGGCG TGGTGTCCAATGCCTATGATACCATGCTGGAAGACGGCGCCGACCCTGCCGAGATCCGCCGCCGCCTCGGCACCCTCAAG GTCGTCTGCCCGATCCGCGAATGCCACTCCTATCAGAATGTCGCCTTTGATGCGCTGAGCGAAATCGTCGAGCAGACCAC GGGCCTCACCTATGCCGCAGCGGCCGAGATCATCCTGTTCCGACCTTTGAGAATGAGCACCGCCAGCACCGGCCGGGCCG CGCTGATGAGTTCGGCTTCGTGGGCCAAGCCCTATACAGCCCGGCGCGGCACCGCCCTGCCCATCCAGCAGACTGTCAAG GAGCCCTACTACCGGGTCCCGGCGGCCGGCGGGGTCAACGGCTCGATCCTCGACCTTGCCCAGTTTGCCCGCGCCCAGAT GGGCCTGGCGCCGGATATTCTGACGCCCGACACCCTGACCGTCCTGCACACGCCGAGGGTCTATACCCCGCGCGAACAGT CTCGCCTGCGAAACCAGTTCGAAAGCCGGATGCAGGATTCCCGCTACGCCCTTGGCTGGCGGGTCTACAAGTATGACATC ACCGGCAACCGGGTCGTTGGCCATCGGGGCGCCGTGGAGGGCTACCGGTCGCTGATGCTGTTTGACCCCGAACTCGATAC CGGCGTTGTTGCGCTCTGGAATTCCAGCGCCCGCCGGCCGGTCGGCATCGAACTGGAAGTGATGGACATGGCCTATGGTC TGCCCCCGCATGACTGGATGAAGATCGATGGCGGCAGCGCCGGGGCGGCCAACTAG
Upstream 100 bases:
>100_bases CTCGCATGCCGATTACAGCGCAACTGCCGCAATCACCTTTACACTTTCATGCCACACACTGCCTTATCCGATAAGCATCA ATGGCAAGGTGGAGAGCTGA
Downstream 100 bases:
>100_bases GCTGATCACGCGGCTTTGACCTGAGATCGCCGGTCTGTGAGGCGGTTTTCAGCGGCAATCAGGCTATGTGACCGCTCATG TTGAAACCGCTCACAGCCCG
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase-Like Protein; Beta-Lactamase Family Protein; Beta-Lactamase Protein; Beta-Lactamase Class C-Like Protein; FmtA-Like Protein; Beta-Lactamase Class C; Beta-Lactamase/Prolyl Oligopeptidase; Class-C Beta-Lactamase Family Protein; Serine-Type D-Ala-D-Ala Carboxypeptidase; 6Fe-6S Prismane Cluster-Containing Protein-Like Protein; Protein Flp; Beta-Lactamase AmpC; Beta-Lactamase Class C Family Protein; Beta-Lactamase Class C Protein; Exported Beta-Lactamase; Beta-Lactamase Family; Amino Acid Adenylation Domain-Containing Protein; D-Alanyl-D-Alanine Carboxypeptidase; Secreted Protein
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTRIFALLLGFFSLTAPAIAQGIDYERLDQRLTQLSREDDMVGLAVAVIEGGEITFARGYGVTAEGEGPVTRDTVFRWAS LSKGVATSLVTKLAMEGRFSLSDTLSSFKTSLRLPGGGEQTATLEDLMAHKVGVVSNAYDTMLEDGADPAEIRRRLGTLK VVCPIRECHSYQNVAFDALSEIVEQTTGLTYAAAAEIILFRPLRMSTASTGRAALMSSASWAKPYTARRGTALPIQQTVK EPYYRVPAAGGVNGSILDLAQFARAQMGLAPDILTPDTLTVLHTPRVYTPREQSRLRNQFESRMQDSRYALGWRVYKYDI TGNRVVGHRGAVEGYRSLMLFDPELDTGVVALWNSSARRPVGIELEVMDMAYGLPPHDWMKIDGGSAGAAN
Sequences:
>Translated_391_residues MTRIFALLLGFFSLTAPAIAQGIDYERLDQRLTQLSREDDMVGLAVAVIEGGEITFARGYGVTAEGEGPVTRDTVFRWAS LSKGVATSLVTKLAMEGRFSLSDTLSSFKTSLRLPGGGEQTATLEDLMAHKVGVVSNAYDTMLEDGADPAEIRRRLGTLK VVCPIRECHSYQNVAFDALSEIVEQTTGLTYAAAAEIILFRPLRMSTASTGRAALMSSASWAKPYTARRGTALPIQQTVK EPYYRVPAAGGVNGSILDLAQFARAQMGLAPDILTPDTLTVLHTPRVYTPREQSRLRNQFESRMQDSRYALGWRVYKYDI TGNRVVGHRGAVEGYRSLMLFDPELDTGVVALWNSSARRPVGIELEVMDMAYGLPPHDWMKIDGGSAGAAN >Mature_390_residues TRIFALLLGFFSLTAPAIAQGIDYERLDQRLTQLSREDDMVGLAVAVIEGGEITFARGYGVTAEGEGPVTRDTVFRWASL SKGVATSLVTKLAMEGRFSLSDTLSSFKTSLRLPGGGEQTATLEDLMAHKVGVVSNAYDTMLEDGADPAEIRRRLGTLKV VCPIRECHSYQNVAFDALSEIVEQTTGLTYAAAAEIILFRPLRMSTASTGRAALMSSASWAKPYTARRGTALPIQQTVKE PYYRVPAAGGVNGSILDLAQFARAQMGLAPDILTPDTLTVLHTPRVYTPREQSRLRNQFESRMQDSRYALGWRVYKYDIT GNRVVGHRGAVEGYRSLMLFDPELDTGVVALWNSSARRPVGIELEVMDMAYGLPPHDWMKIDGGSAGAAN
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42682; Mature: 42551
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIFALLLGFFSLTAPAIAQGIDYERLDQRLTQLSREDDMVGLAVAVIEGGEITFARGY CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEECCC GVTAEGEGPVTRDTVFRWASLSKGVATSLVTKLAMEGRFSLSDTLSSFKTSLRLPGGGEQ CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TATLEDLMAHKVGVVSNAYDTMLEDGADPAEIRRRLGTLKVVCPIRECHSYQNVAFDALS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHCHHHHHHHHHH EIVEQTTGLTYAAAAEIILFRPLRMSTASTGRAALMSSASWAKPYTARRGTALPIQQTVK HHHHHHCCCCHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHC EPYYRVPAAGGVNGSILDLAQFARAQMGLAPDILTPDTLTVLHTPRVYTPREQSRLRNQF CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH ESRMQDSRYALGWRVYKYDITGNRVVGHRGAVEGYRSLMLFDPELDTGVVALWNSSARRP HHHHHCCCEEEEEEEEEEECCCCEEECCCCHHHHHHEEEEECCCCCCCEEEEECCCCCCC VGIELEVMDMAYGLPPHDWMKIDGGSAGAAN CCEEEEEEHHHCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure TRIFALLLGFFSLTAPAIAQGIDYERLDQRLTQLSREDDMVGLAVAVIEGGEITFARGY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEECCC GVTAEGEGPVTRDTVFRWASLSKGVATSLVTKLAMEGRFSLSDTLSSFKTSLRLPGGGEQ CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TATLEDLMAHKVGVVSNAYDTMLEDGADPAEIRRRLGTLKVVCPIRECHSYQNVAFDALS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHCHHHHHHHHHH EIVEQTTGLTYAAAAEIILFRPLRMSTASTGRAALMSSASWAKPYTARRGTALPIQQTVK HHHHHHCCCCHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHC EPYYRVPAAGGVNGSILDLAQFARAQMGLAPDILTPDTLTVLHTPRVYTPREQSRLRNQF CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH ESRMQDSRYALGWRVYKYDITGNRVVGHRGAVEGYRSLMLFDPELDTGVVALWNSSARRP HHHHHCCCEEEEEEEEEEECCCCEEECCCCHHHHHHEEEEECCCCCCCEEEEECCCCCCC VGIELEVMDMAYGLPPHDWMKIDGGSAGAAN CCEEEEEEHHHCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA