| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is merA [H]
Identifier: 114799977
GI number: 114799977
Start: 1731485
End: 1732909
Strand: Direct
Name: merA [H]
Synonym: HNE_1691
Alternate gene names: 114799977
Gene position: 1731485-1732909 (Clockwise)
Preceding gene: 114797310
Following gene: 114799808
Centisome position: 46.73
GC content: 61.4
Gene sequence:
>1425_bases ATGAAACACGAATGCTGCGCGCCGAACTGTGAGTACGACCTCGCCGTGATTGGTGCCGGATCGGCTGGATTCTCCGCCGC TATTACGGCCGCAGAGGGCGGTGTGCGCGTGGCTCTTATAGGGCACGGTACGATTGGCGGTACCTGCGTGAACGTCGGAT GCGTCCCCTCCAAGACGATGATCCGCGCCGCTGAGGCGGTGTTTAGTGCGCAGTCGGCGCATCGGTTCCCGGGACTCAGG GGAGAAGCGCAGGTTTCTGACTGGGCGGCGCTGATCGCAGCAAAGGAAGATCTCGTCGCGTCACTGCGGCAGAAAAAATA CGCCAACTTGCTACCAGGCTATCATGGTGTGACTTACATCGATGAGGGGCCAGCGCGGCTCGTACTTGGCGGTGTGGAGG TCGGCGGACGGAAGATCAAGGTATCCAAGGTCATCGTCGCCACTGGCGGCCGCTCGGCCGTTCCTGACGTCGCCGGTATT TCGGAGGTGCCGACGCTCGACAGCACGGCGCTCCTGGAGCTGAAGGCGCTGCCCGAGAGCCTGATCTTCCTCGGCGGCGG CTATATCGGTGTGGAACTCGCACAGATGATGGCGAGGCTGGGTACCCGCGTCACGATCGTGTGCCGCTCGCGGTTGTTGC CGCGCGCTGAACCAGAGGTGTCCGAGGCGCTCGCGAAGGCACTGCGCGCCGAGGGCATCTCGGTTGTGGAAAAGGTAACC TATGACGCCGCACGGCTGGACGGCAGCCGCACAGTCGTGACGGTAACGGTGAACGGTGCCGCCAGAGACCTGGCGGCTGA TCACCTTGTCCTGTCGACTGGGCGCATTCCCAACACGGATGGGCTGGGGCTCAAAGAGATGGGTGTCGAGACTGATCAGC GGGGCGCGATCATCGTTGGCGATGATATGGCCACCACACGTTCCGGTGTATACGCAGCAGGCGACGTAACTGACCGGGAT CAGTTCGTATACATGGCCGCTTATGGCGCCAAGCTGGCGGCGCGAAATGCGGTACTGGGAGGGAAGGAATGCTACGACAA CGCCGCGATGCCGTGGGTGGTTTTCTGCGATCCGCAGATTGCAGGTGTCGGTCTGACCGAGGCGCAGGCTTACGCCGCAG GCTATGATGTCAAGACCAGTGTGCTTCCGCTTGAGAATGTTCCTCGGGCGCTCGCGGCACGCAATACCACAGGGCTGATC AAGTTGGTCGCAGACCGGGCTAATGACCGACTGCTCGGCGGTGTGATCATGGCGCAGGAAGGCGCTGATAGTATCCAGAC ACTTTCACTGGCACTGAAGTTCGGCATGACGACAAAGGCGCTCGGCGAAACCATTTTCCCTTATTTAACGACAGTCGAGG GGTTCAAGCTGGCGGCGCAGACTTTCGACAAGGATGTCGCGAAACTCTCCTGTTGCGCGGGCTGA
Upstream 100 bases:
>100_bases CTGGTGATTTCAGGACCGCTACCCGCAATCAATGATTCAAGGGGCCTCCAAGTTTCGCGTCTCTTGCAACTTCACGAGAC AAGTCTCGAAGGAAAACTCA
Downstream 100 bases:
>100_bases GTCGCCGATTGGCACGCATTTCCTTTTTGCCGGTCAGTCACACCGCTCCACAAAGCGGCCGGGAGCATCACCGGCATCAA GCGCGAAGTCTCAGACCGGC
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKHECCAPNCEYDLAVIGAGSAGFSAAITAAEGGVRVALIGHGTIGGTCVNVGCVPSKTMIRAAEAVFSAQSAHRFPGLR GEAQVSDWAALIAAKEDLVASLRQKKYANLLPGYHGVTYIDEGPARLVLGGVEVGGRKIKVSKVIVATGGRSAVPDVAGI SEVPTLDSTALLELKALPESLIFLGGGYIGVELAQMMARLGTRVTIVCRSRLLPRAEPEVSEALAKALRAEGISVVEKVT YDAARLDGSRTVVTVTVNGAARDLAADHLVLSTGRIPNTDGLGLKEMGVETDQRGAIIVGDDMATTRSGVYAAGDVTDRD QFVYMAAYGAKLAARNAVLGGKECYDNAAMPWVVFCDPQIAGVGLTEAQAYAAGYDVKTSVLPLENVPRALAARNTTGLI KLVADRANDRLLGGVIMAQEGADSIQTLSLALKFGMTTKALGETIFPYLTTVEGFKLAAQTFDKDVAKLSCCAG
Sequences:
>Translated_474_residues MKHECCAPNCEYDLAVIGAGSAGFSAAITAAEGGVRVALIGHGTIGGTCVNVGCVPSKTMIRAAEAVFSAQSAHRFPGLR GEAQVSDWAALIAAKEDLVASLRQKKYANLLPGYHGVTYIDEGPARLVLGGVEVGGRKIKVSKVIVATGGRSAVPDVAGI SEVPTLDSTALLELKALPESLIFLGGGYIGVELAQMMARLGTRVTIVCRSRLLPRAEPEVSEALAKALRAEGISVVEKVT YDAARLDGSRTVVTVTVNGAARDLAADHLVLSTGRIPNTDGLGLKEMGVETDQRGAIIVGDDMATTRSGVYAAGDVTDRD QFVYMAAYGAKLAARNAVLGGKECYDNAAMPWVVFCDPQIAGVGLTEAQAYAAGYDVKTSVLPLENVPRALAARNTTGLI KLVADRANDRLLGGVIMAQEGADSIQTLSLALKFGMTTKALGETIFPYLTTVEGFKLAAQTFDKDVAKLSCCAG >Mature_474_residues MKHECCAPNCEYDLAVIGAGSAGFSAAITAAEGGVRVALIGHGTIGGTCVNVGCVPSKTMIRAAEAVFSAQSAHRFPGLR GEAQVSDWAALIAAKEDLVASLRQKKYANLLPGYHGVTYIDEGPARLVLGGVEVGGRKIKVSKVIVATGGRSAVPDVAGI SEVPTLDSTALLELKALPESLIFLGGGYIGVELAQMMARLGTRVTIVCRSRLLPRAEPEVSEALAKALRAEGISVVEKVT YDAARLDGSRTVVTVTVNGAARDLAADHLVLSTGRIPNTDGLGLKEMGVETDQRGAIIVGDDMATTRSGVYAAGDVTDRD QFVYMAAYGAKLAARNAVLGGKECYDNAAMPWVVFCDPQIAGVGLTEAQAYAAGYDVKTSVLPLENVPRALAARNTTGLI KLVADRANDRLLGGVIMAQEGADSIQTLSLALKFGMTTKALGETIFPYLTTVEGFKLAAQTFDKDVAKLSCCAG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=475, Percent_Identity=28.8421052631579, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI50301238, Length=465, Percent_Identity=29.8924731182796, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI148277071, Length=426, Percent_Identity=26.056338028169, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI148277065, Length=426, Percent_Identity=26.056338028169, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI33519430, Length=426, Percent_Identity=26.056338028169, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI33519428, Length=426, Percent_Identity=26.056338028169, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI33519426, Length=426, Percent_Identity=26.056338028169, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI22035672, Length=477, Percent_Identity=27.6729559748428, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI291045266, Length=432, Percent_Identity=25.9259259259259, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI291045268, Length=427, Percent_Identity=24.5901639344262, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI87081717, Length=465, Percent_Identity=32.258064516129, Blast_Score=215, Evalue=5e-57, Organism=Escherichia coli, GI1786307, Length=475, Percent_Identity=29.2631578947368, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1789915, Length=436, Percent_Identity=32.1100917431193, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI87082354, Length=465, Percent_Identity=25.8064516129032, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32565766, Length=465, Percent_Identity=30.1075268817204, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17557007, Length=476, Percent_Identity=29.6218487394958, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI71983429, Length=455, Percent_Identity=30.5494505494506, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71983419, Length=455, Percent_Identity=30.5494505494506, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71982272, Length=477, Percent_Identity=25.9958071278826, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6321091, Length=488, Percent_Identity=30.1229508196721, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6325166, Length=466, Percent_Identity=26.3948497854077, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6325240, Length=480, Percent_Identity=27.0833333333333, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI21358499, Length=478, Percent_Identity=29.0794979079498, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24640551, Length=506, Percent_Identity=29.4466403162055, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24640549, Length=502, Percent_Identity=29.0836653386454, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI24640553, Length=502, Percent_Identity=29.0836653386454, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI17737741, Length=510, Percent_Identity=27.6470588235294, Blast_Score=129, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49321; Mature: 49321
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHECCAPNCEYDLAVIGAGSAGFSAAITAAEGGVRVALIGHGTIGGTCVNVGCVPSKTM CCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCHHH IRAAEAVFSAQSAHRFPGLRGEAQVSDWAALIAAKEDLVASLRQKKYANLLPGYHGVTYI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE DEGPARLVLGGVEVGGRKIKVSKVIVATGGRSAVPDVAGISEVPTLDSTALLELKALPES ECCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEEEHHCCCE LIFLGGGYIGVELAQMMARLGTRVTIVCRSRLLPRAEPEVSEALAKALRAEGISVVEKVT EEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH YDAARLDGSRTVVTVTVNGAARDLAADHLVLSTGRIPNTDGLGLKEMGVETDQRGAIIVG HHHHHCCCCCEEEEEEECCCHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCCCCCEEEEC DDMATTRSGVYAAGDVTDRDQFVYMAAYGAKLAARNAVLGGKECYDNAAMPWVVFCDPQI CCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCCCCEEEEECCCC AGVGLTEAQAYAAGYDVKTSVLPLENVPRALAARNTTGLIKLVADRANDRLLGGVIMAQE CCCCCCHHHHHHCCCCCEEEEECHHHCCHHHHHCCCCCEEEEEECCCCCEEEEEEEEECC GADSIQTLSLALKFGMTTKALGETIFPYLTTVEGFKLAAQTFDKDVAKLSCCAG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHECCAPNCEYDLAVIGAGSAGFSAAITAAEGGVRVALIGHGTIGGTCVNVGCVPSKTM CCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCHHH IRAAEAVFSAQSAHRFPGLRGEAQVSDWAALIAAKEDLVASLRQKKYANLLPGYHGVTYI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE DEGPARLVLGGVEVGGRKIKVSKVIVATGGRSAVPDVAGISEVPTLDSTALLELKALPES ECCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEEEHHCCCE LIFLGGGYIGVELAQMMARLGTRVTIVCRSRLLPRAEPEVSEALAKALRAEGISVVEKVT EEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH YDAARLDGSRTVVTVTVNGAARDLAADHLVLSTGRIPNTDGLGLKEMGVETDQRGAIIVG HHHHHCCCCCEEEEEEECCCHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCCCCCEEEEC DDMATTRSGVYAAGDVTDRDQFVYMAAYGAKLAARNAVLGGKECYDNAAMPWVVFCDPQI CCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCCCCEEEEECCCC AGVGLTEAQAYAAGYDVKTSVLPLENVPRALAARNTTGLIKLVADRANDRLLGGVIMAQE CCCCCCHHHHHHCCCCCEEEEECHHHCCHHHHHCCCCCEEEEEECCCCCEEEEEEEEECC GADSIQTLSLALKFGMTTKALGETIFPYLTTVEGFKLAAQTFDKDVAKLSCCAG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]