| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is hisB
Identifier: 114799970
GI number: 114799970
Start: 58991
End: 59617
Strand: Reverse
Name: hisB
Synonym: HNE_0073
Alternate gene names: 114799970
Gene position: 59617-58991 (Counterclockwise)
Preceding gene: 114798620
Following gene: 114798251
Centisome position: 1.61
GC content: 60.29
Gene sequence:
>627_bases TTGCGCCTCCGGCAGTTTATATGGCTTTCCATGACCCAGACCCGCACCGCAGACGTCTCCCGCAGCACAAAGGAAACCGA AATCTCGGTATCCGTTAACCTTGATGGCACCGGTAAAGCCGACATCGAGACGGGAATCGGCTTTTTCGATCACATGCTGG ACAGCCTGGCGCGCCATTCGCTGATCGACCTGAAAGTGCGCTGCAAGGGCGACACCCATATCGACTTCCACCACTCGGTG GAGGACACCGGCATCGTTATCGGCCAGGCGATTGCCAAGGCGCTGGGCGATTTTGGCGGCATCACGCGCTTTGGCCATGC CTATATCCCGATGGACGAGACGCTGACCCGCGCCTCAGTCGACCTGTGCAAACGCCCCTACCTGATCTGGAAGGTGGAGT TCCGGCGCGACAAGATCGGCGAGATGGATACTGAACTCTTCAAGGAGTTCTTCCATGCCCTGGCCGGCAATGGCGGCATG TGCCTGCACGTCGAGAACATCTATGGCGAGAACAACCACCACATCGCCGAAAGCTGTTTCAAGGCGACAGCCCGCGCCCT GCGCACCGCCATCACGGTGGACCCGCGCCTTGGCGGCAAACCGGCCAGCACCAAGGGCAGCCTCTAG
Upstream 100 bases:
>100_bases CTGTTTCAGTCCATTGCCCACTCGGAAGCCCAACTCAGTAATTGCCGCAAAGACTGCGCCTTAGATGTTTAGGAATCCGT GAACACAGATGCGCTAGCTG
Downstream 100 bases:
>100_bases GCGCCCCTGCCCGGCTCAGCCTGAGGGGTCTTCATCCTTGGCGTTGACGCGCGAGACCAGCACCTTGTCGAGGCGCCGGC CGTCCATGTCGATCACCTCG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRLRQFIWLSMTQTRTADVSRSTKETEISVSVNLDGTGKADIETGIGFFDHMLDSLARHSLIDLKVRCKGDTHIDFHHSV EDTGIVIGQAIAKALGDFGGITRFGHAYIPMDETLTRASVDLCKRPYLIWKVEFRRDKIGEMDTELFKEFFHALAGNGGM CLHVENIYGENNHHIAESCFKATARALRTAITVDPRLGGKPASTKGSL
Sequences:
>Translated_208_residues MRLRQFIWLSMTQTRTADVSRSTKETEISVSVNLDGTGKADIETGIGFFDHMLDSLARHSLIDLKVRCKGDTHIDFHHSV EDTGIVIGQAIAKALGDFGGITRFGHAYIPMDETLTRASVDLCKRPYLIWKVEFRRDKIGEMDTELFKEFFHALAGNGGM CLHVENIYGENNHHIAESCFKATARALRTAITVDPRLGGKPASTKGSL >Mature_208_residues MRLRQFIWLSMTQTRTADVSRSTKETEISVSVNLDGTGKADIETGIGFFDHMLDSLARHSLIDLKVRCKGDTHIDFHHSV EDTGIVIGQAIAKALGDFGGITRFGHAYIPMDETLTRASVDLCKRPYLIWKVEFRRDKIGEMDTELFKEFFHALAGNGGM CLHVENIYGENNHHIAESCFKATARALRTAITVDPRLGGKPASTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=47.4226804123711, Blast_Score=172, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6324776, Length=222, Percent_Identity=39.6396396396396, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_HYPNA (Q0C636)
Other databases:
- EMBL: CP000158 - RefSeq: YP_758807.1 - ProteinModelPortal: Q0C636 - SMR: Q0C636 - STRING: Q0C636 - GeneID: 4290184 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0073 - NMPDR: fig|228405.5.peg.72 - TIGR: HNE_0073 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: Q0C636 - ProtClustDB: PRK00951 - BioCyc: HNEP81032:HNE_0073-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 23125; Mature: 23125
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRQFIWLSMTQTRTADVSRSTKETEISVSVNLDGTGKADIETGIGFFDHMLDSLARHS CCCHHEEEEECCCCCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC LIDLKVRCKGDTHIDFHHSVEDTGIVIGQAIAKALGDFGGITRFGHAYIPMDETLTRASV EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCEECCCHHHHHHHHH DLCKRPYLIWKVEFRRDKIGEMDTELFKEFFHALAGNGGMCLHVENIYGENNHHIAESCF HHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHHHHH KATARALRTAITVDPRLGGKPASTKGSL HHHHHHHHHHEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRLRQFIWLSMTQTRTADVSRSTKETEISVSVNLDGTGKADIETGIGFFDHMLDSLARHS CCCHHEEEEECCCCCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC LIDLKVRCKGDTHIDFHHSVEDTGIVIGQAIAKALGDFGGITRFGHAYIPMDETLTRASV EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCEECCCHHHHHHHHH DLCKRPYLIWKVEFRRDKIGEMDTELFKEFFHALAGNGGMCLHVENIYGENNHHIAESCF HHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHHHHH KATARALRTAITVDPRLGGKPASTKGSL HHHHHHHHHHEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA