| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799917
Identifier: 114799917
GI number: 114799917
Start: 3530504
End: 3531475
Strand: Reverse
Name: 114799917
Synonym: HNE_3383
Alternate gene names: NA
Gene position: 3531475-3530504 (Counterclockwise)
Preceding gene: 114797490
Following gene: 114799744
Centisome position: 95.32
GC content: 63.17
Gene sequence:
>972_bases ATGAAGAAATTTCTGATGGCATCGGTGCTTGTGCTGGCCGCGTGCGGGCATATGGCGGCAGAGGAAACCGCGCCGGGCGC GCCAGGGGCAAAGCCTGAGACCAAAGAGGTCTGGTATCCCTCCCGCTATGGCGCGGAGGACCGGATCGGGGCGATGAACC TGCTCTCGCCGGAGAAGACCGCGGAAGCCGCCAAGCTGATTACCACCGGCAAGACCTATTCGCTGGGCCAGGTGACGGGG CGCAAGACGCCCGCCTATGGCCCGCGCAGCTTCTCGATGACAATCCTTCAGCTCTCGGACGGATCGGGCACGCCGATGGG CGAGAACAAGGCGGTTGGCAATGACGACCTGGTCAACACCTATGTCGGGATTGGCAGCCAGATCGACGGGCTCGGCCATA TGGGCATCGATCACCGCTATTATAACGGTGTTCCGGTGGCGGACTTTGTAACGACAGGCGGGCTGACGCAGTTTGGCACG CATGACATTCCGCCGATCGCGACACGCGGCGTGCTGCTCGACATGACGAAACAGTTTGGCGATCCGGTGCCTGCAGGTAC GGCGTTCAACAAGGCCGAGATCGATGCGGCGATGGCGGCGGCGGGGGTCACAGTCGGGGAGGGGGATGTGGTTCTCTTCC ATACCGGCACGATGAAATCGCAGGAAGGCTCAGAAGAACTTCCGCCCACGGAACCTGGTCCCGGCGTGGAAGGCGCGCAG TATCTCGCCGACCTGGGCGTTGTGGCGGTGGGCGCTGACACCTGGGCGCTGGAAGTGATCCCGTTTGAAGCCGAGACACG GCCGTTTGATGTCCACCTGACCCTGCTGGCGAAGAACGGGGTTTACATCCTGGAGAATATGGTGACCGACGAACTGGCCG CTGACGGGGCGACCGAGTTCTTCTTCACGCTCGGCGCGCCGCGCCTTGAGGGGGCGGTGCAGGCCATCGTCAATCCGGTA GCCATCCGCTAG
Upstream 100 bases:
>100_bases TTCCCGCGGGCGGGCTTTCTGGTGCGCCGGGCCTGAGGGCGCTTGCACGTTGACGCCAGCGCGCTAGGCTTTCTCCCAAA GAACGAAACGGGAGGAAGTG
Downstream 100 bases:
>100_bases CGGATTATGCCTTCAGGAAGGCCGTGATCTCGTTTGCCAGCGTTTCTGACATGGCGTCGGCGAGATCATGGCCCCAGCCT GGGAACGCCTTGAAGCGGGC
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Yclase SCIF3.09c; Metal-Dependent Hydrolase; LOW QUALITY PROTEIN Cyclase; Exported Cyclase; Cyclase Family; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV AIR
Sequences:
>Translated_323_residues MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV AIR >Mature_323_residues MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV AIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33831; Mature: 33831
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKT CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH AEAAKLITTGKTYSLGQVTGRKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNT HHHHHHEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH YVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGTHDIPPIATRGVLLDMTKQFG HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCHHEEHHHHHC DPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ CCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEF HHHHCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHCCCCCEE FFTLGAPRLEGAVQAIVNPVAIR EEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKT CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH AEAAKLITTGKTYSLGQVTGRKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNT HHHHHHEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH YVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGTHDIPPIATRGVLLDMTKQFG HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCHHEEHHHHHC DPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ CCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEF HHHHCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHCCCCCEE FFTLGAPRLEGAVQAIVNPVAIR EEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA