Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799917

Identifier: 114799917

GI number: 114799917

Start: 3530504

End: 3531475

Strand: Reverse

Name: 114799917

Synonym: HNE_3383

Alternate gene names: NA

Gene position: 3531475-3530504 (Counterclockwise)

Preceding gene: 114797490

Following gene: 114799744

Centisome position: 95.32

GC content: 63.17

Gene sequence:

>972_bases
ATGAAGAAATTTCTGATGGCATCGGTGCTTGTGCTGGCCGCGTGCGGGCATATGGCGGCAGAGGAAACCGCGCCGGGCGC
GCCAGGGGCAAAGCCTGAGACCAAAGAGGTCTGGTATCCCTCCCGCTATGGCGCGGAGGACCGGATCGGGGCGATGAACC
TGCTCTCGCCGGAGAAGACCGCGGAAGCCGCCAAGCTGATTACCACCGGCAAGACCTATTCGCTGGGCCAGGTGACGGGG
CGCAAGACGCCCGCCTATGGCCCGCGCAGCTTCTCGATGACAATCCTTCAGCTCTCGGACGGATCGGGCACGCCGATGGG
CGAGAACAAGGCGGTTGGCAATGACGACCTGGTCAACACCTATGTCGGGATTGGCAGCCAGATCGACGGGCTCGGCCATA
TGGGCATCGATCACCGCTATTATAACGGTGTTCCGGTGGCGGACTTTGTAACGACAGGCGGGCTGACGCAGTTTGGCACG
CATGACATTCCGCCGATCGCGACACGCGGCGTGCTGCTCGACATGACGAAACAGTTTGGCGATCCGGTGCCTGCAGGTAC
GGCGTTCAACAAGGCCGAGATCGATGCGGCGATGGCGGCGGCGGGGGTCACAGTCGGGGAGGGGGATGTGGTTCTCTTCC
ATACCGGCACGATGAAATCGCAGGAAGGCTCAGAAGAACTTCCGCCCACGGAACCTGGTCCCGGCGTGGAAGGCGCGCAG
TATCTCGCCGACCTGGGCGTTGTGGCGGTGGGCGCTGACACCTGGGCGCTGGAAGTGATCCCGTTTGAAGCCGAGACACG
GCCGTTTGATGTCCACCTGACCCTGCTGGCGAAGAACGGGGTTTACATCCTGGAGAATATGGTGACCGACGAACTGGCCG
CTGACGGGGCGACCGAGTTCTTCTTCACGCTCGGCGCGCCGCGCCTTGAGGGGGCGGTGCAGGCCATCGTCAATCCGGTA
GCCATCCGCTAG

Upstream 100 bases:

>100_bases
TTCCCGCGGGCGGGCTTTCTGGTGCGCCGGGCCTGAGGGCGCTTGCACGTTGACGCCAGCGCGCTAGGCTTTCTCCCAAA
GAACGAAACGGGAGGAAGTG

Downstream 100 bases:

>100_bases
CGGATTATGCCTTCAGGAAGGCCGTGATCTCGTTTGCCAGCGTTTCTGACATGGCGTCGGCGAGATCATGGCCCCAGCCT
GGGAACGCCTTGAAGCGGGC

Product: putative cyclase

Products: NA

Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Yclase SCIF3.09c; Metal-Dependent Hydrolase; LOW QUALITY PROTEIN Cyclase; Exported Cyclase; Cyclase Family; Metal-Dependent Cyclase Family Protein

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG
RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT
HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ
YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV
AIR

Sequences:

>Translated_323_residues
MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG
RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT
HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ
YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV
AIR
>Mature_323_residues
MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKTAEAAKLITTGKTYSLGQVTG
RKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNTYVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGT
HDIPPIATRGVLLDMTKQFGDPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ
YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEFFFTLGAPRLEGAVQAIVNPV
AIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33831; Mature: 33831

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKT
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
AEAAKLITTGKTYSLGQVTGRKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNT
HHHHHHEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
YVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGTHDIPPIATRGVLLDMTKQFG
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCHHEEHHHHHC
DPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ
CCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH
YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEF
HHHHCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHCCCCCEE
FFTLGAPRLEGAVQAIVNPVAIR
EEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFLMASVLVLAACGHMAAEETAPGAPGAKPETKEVWYPSRYGAEDRIGAMNLLSPEKT
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
AEAAKLITTGKTYSLGQVTGRKTPAYGPRSFSMTILQLSDGSGTPMGENKAVGNDDLVNT
HHHHHHEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
YVGIGSQIDGLGHMGIDHRYYNGVPVADFVTTGGLTQFGTHDIPPIATRGVLLDMTKQFG
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCHHEEHHHHHC
DPVPAGTAFNKAEIDAAMAAAGVTVGEGDVVLFHTGTMKSQEGSEELPPTEPGPGVEGAQ
CCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH
YLADLGVVAVGADTWALEVIPFEAETRPFDVHLTLLAKNGVYILENMVTDELAADGATEF
HHHHCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHCCCCCEE
FFTLGAPRLEGAVQAIVNPVAIR
EEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA