| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799915
Identifier: 114799915
GI number: 114799915
Start: 3353715
End: 3354266
Strand: Direct
Name: 114799915
Synonym: HNE_3177
Alternate gene names: NA
Gene position: 3353715-3354266 (Clockwise)
Preceding gene: 114797726
Following gene: 114798520
Centisome position: 90.52
GC content: 69.57
Gene sequence:
>552_bases TTGCCACGGCGCGATCGAAACCCAGAAAGCCTGATCGGCGCTTCTGACACGCGAAACGGAACTGTGCGCCCCGCCCCCAA GGTGGGACGTACCCCGTTTCAGGGGGATGCCCGCTCCGGCGTCTGCGCTAAGCTGGAGGCCATGAAACACGCGCTCTTTC TGGCTGCCCTGCCGGCCCTCCTCGCCCTGCCCGCCCTTGCCGATGTCAAACCGGCCGACGCCGCCCCCTTTGCCGGGTCC TGGCAGATTGCCTTCCCGGACGGCGAAGGCGTCATCGTCAACGTGCCCCAGGTTTCCTGCGAGGACCCCGCCGTCATCAC GCAGCTGGACGAGGACACCCTCCACGCCCGCACACCCGGCGGCGACATGGGCGCCTGGGACGTGAAGGCCTTTGGCGGAC GCTTCCCCTGGTGGCGCGAGGACGGGGCCTCGCTGGTCGCCGACTGGGTCCGGGACGACGCCTTCCTCCTCGCCGGGAAG GACGCCACCGGCATCCAGACCGACTGGGCAAACGCCAAGCAATGGACCCGCTGCCCCGCCGCCGCGGAGTAA
Upstream 100 bases:
>100_bases CCCAGCCGCCCGGCCCTGCACTGCACCAGGCCGAAGACGACTGGACCAACACCCCGCGCAATTCGGCCTGCCCCTGCGGC TCGGGCAAAAAATACAAACA
Downstream 100 bases:
>100_bases AAAGCGCCCCGTGCGGCATCGCGGTTGGAGTTTTTTGAACCTGCCGTTGGAGTTTTTCGGGCGCTCGTTGGAGTTTTTCC TGGAGTTTTTTGGAGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPRRDRNPESLIGASDTRNGTVRPAPKVGRTPFQGDARSGVCAKLEAMKHALFLAALPALLALPALADVKPADAAPFAGS WQIAFPDGEGVIVNVPQVSCEDPAVITQLDEDTLHARTPGGDMGAWDVKAFGGRFPWWREDGASLVADWVRDDAFLLAGK DATGIQTDWANAKQWTRCPAAAE
Sequences:
>Translated_183_residues MPRRDRNPESLIGASDTRNGTVRPAPKVGRTPFQGDARSGVCAKLEAMKHALFLAALPALLALPALADVKPADAAPFAGS WQIAFPDGEGVIVNVPQVSCEDPAVITQLDEDTLHARTPGGDMGAWDVKAFGGRFPWWREDGASLVADWVRDDAFLLAGK DATGIQTDWANAKQWTRCPAAAE >Mature_182_residues PRRDRNPESLIGASDTRNGTVRPAPKVGRTPFQGDARSGVCAKLEAMKHALFLAALPALLALPALADVKPADAAPFAGSW QIAFPDGEGVIVNVPQVSCEDPAVITQLDEDTLHARTPGGDMGAWDVKAFGGRFPWWREDGASLVADWVRDDAFLLAGKD ATGIQTDWANAKQWTRCPAAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19531; Mature: 19400
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRDRNPESLIGASDTRNGTVRPAPKVGRTPFQGDARSGVCAKLEAMKHALFLAALPAL CCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LALPALADVKPADAAPFAGSWQIAFPDGEGVIVNVPQVSCEDPAVITQLDEDTLHARTPG HHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCEEEECCC GDMGAWDVKAFGGRFPWWREDGASLVADWVRDDAFLLAGKDATGIQTDWANAKQWTRCPA CCCCCEEHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCC AAE CCC >Mature Secondary Structure PRRDRNPESLIGASDTRNGTVRPAPKVGRTPFQGDARSGVCAKLEAMKHALFLAALPAL CCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LALPALADVKPADAAPFAGSWQIAFPDGEGVIVNVPQVSCEDPAVITQLDEDTLHARTPG HHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCEEEECCC GDMGAWDVKAFGGRFPWWREDGASLVADWVRDDAFLLAGKDATGIQTDWANAKQWTRCPA CCCCCEEHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCC AAE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA