| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799779
Identifier: 114799779
GI number: 114799779
Start: 1353379
End: 1353900
Strand: Direct
Name: 114799779
Synonym: HNE_1320
Alternate gene names: NA
Gene position: 1353379-1353900 (Clockwise)
Preceding gene: 114797919
Following gene: 114800254
Centisome position: 36.53
GC content: 66.86
Gene sequence:
>522_bases ATGAGCGGACTGCCCAACTGGCTGACACCCGCCGCGCTTGGCGTGTCGCTTCTGGTGAACCTCGGGCTTGGCGGCTATGT CGCCGGCCAGCATCTGCGTGCCGATCCACCCCGGCAGGAGCGCAGCCAGGAGCGGCCCCGTTTCGAGCGGCCCGAAGGCA TGCCGGAAATCTCCCGCGAAGATCGCCGCGAAGTGCGTGGTCTGATGCGGCAGGGCTTTGAATCGGCGCAGGCAGAACTG GCCGCCCGCCGGGAAGCCGAAGCGCGGTTTGCGCTGGTTCTGGCGGCGGAAAACTTTGATCGCGAGGCGGCGGAAGTAGC GCTGCGGGAACTGCGCGATGCGGACGTGATGCTCCGTGACCGGATCGGCCTGGAAGTCCTCAGCGGGATCAGCGAGCTGA GCCCGGATCAGCGGGCCTGGGTGGCGTGGATACTGTCCGGCCCCAAGGACAGCCATGGCAAGCACAGGAAAAAAGACAAA AAGCCACCCACACCGCCCGAAGGCGAACCGCCACCGCGCTAG
Upstream 100 bases:
>100_bases CGGTCGCCAGCGCAGAAGATGAGATGACAGCTGAAGTCGAGGAACTCGTCGTTTCGGCGCTGGGCTTTGATACGGCGACC TATGCCGTGGAGGAACTGGA
Downstream 100 bases:
>100_bases TCTTTTGACTTGTGCGCCAGGCGCGCGGCGTTGGCTTCCCAATTCTGCCCATCGAACGGAACAACCGTTACTTTAAGGTC CATCCAGTCATCCAGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSGLPNWLTPAALGVSLLVNLGLGGYVAGQHLRADPPRQERSQERPRFERPEGMPEISREDRREVRGLMRQGFESAQAEL AARREAEARFALVLAAENFDREAAEVALRELRDADVMLRDRIGLEVLSGISELSPDQRAWVAWILSGPKDSHGKHRKKDK KPPTPPEGEPPPR
Sequences:
>Translated_173_residues MSGLPNWLTPAALGVSLLVNLGLGGYVAGQHLRADPPRQERSQERPRFERPEGMPEISREDRREVRGLMRQGFESAQAEL AARREAEARFALVLAAENFDREAAEVALRELRDADVMLRDRIGLEVLSGISELSPDQRAWVAWILSGPKDSHGKHRKKDK KPPTPPEGEPPPR >Mature_172_residues SGLPNWLTPAALGVSLLVNLGLGGYVAGQHLRADPPRQERSQERPRFERPEGMPEISREDRREVRGLMRQGFESAQAELA ARREAEARFALVLAAENFDREAAEVALRELRDADVMLRDRIGLEVLSGISELSPDQRAWVAWILSGPKDSHGKHRKKDKK PPTPPEGEPPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19341; Mature: 19210
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLPNWLTPAALGVSLLVNLGLGGYVAGQHLRADPPRQERSQERPRFERPEGMPEISRE CCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH DRREVRGLMRQGFESAQAELAARREAEARFALVLAAENFDREAAEVALRELRDADVMLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH RIGLEVLSGISELSPDQRAWVAWILSGPKDSHGKHRKKDKKPPTPPEGEPPPR HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SGLPNWLTPAALGVSLLVNLGLGGYVAGQHLRADPPRQERSQERPRFERPEGMPEISRE CCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH DRREVRGLMRQGFESAQAELAARREAEARFALVLAAENFDREAAEVALRELRDADVMLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH RIGLEVLSGISELSPDQRAWVAWILSGPKDSHGKHRKKDKKPPTPPEGEPPPR HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA