| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799771
Identifier: 114799771
GI number: 114799771
Start: 2898256
End: 2899086
Strand: Direct
Name: 114799771
Synonym: HNE_2736
Alternate gene names: NA
Gene position: 2898256-2899086 (Clockwise)
Preceding gene: 114798110
Following gene: 114797452
Centisome position: 78.23
GC content: 65.1
Gene sequence:
>831_bases ATGTCAGTCGTTGCAATGCTTCAGGGCACACCGGAAACGGATGTGGAGACAACCCGGTCAGCGCTCGCCATGGCGCAAAA GCTTGGCACAAGCCTGGTCGGGCTGTGTGCGCTGCCTGATCCCCAGGCCGCCGTCATGCTGGTTACCACGCCGGAATCCA CGGGGCTGACCGCAGCAGCGGCCACAAACATCATCGAGTTGCAGAAGGAAATGCTGGAGAAGGCCGAGGCCGCTTTCCGC CAGGGCGTGGGCGTGACGCCCGGCGTTGAGAGCGTATTCCTGCATCAGGTGGCCAATGCCGAAGCGGCCGCGGCGAGCGC CGCGACGCTGGCGGATGCCATCATTTTTCCCCGCAATGCCGCGCGCAGCGGTGAGCCGCTCTCCATCGCGTTTGATCATG TGATGATGGATGCCCGCCTGCCATTGGTTCTGGCGGGCACGGCCGCCTACACGCCCGGCCCGGTCATCATCGGCTGGGAT GGCTCCAATGGCGCAGCCCGCGCGCTGCGTTTTCATATTCCGCTGCTGAAAGCGGCCGGAGAAGTCATTATCGCGCAGAA CCGCAAGGACGCAGAGCGCGATGGCGCCCGGCCGGGCATCGAGCCTGGATCCCTGGAAGACTGGCTGAAACGTAAGGGCA TCAAGTCCAGCGTTTCCCCGATTGAGGGCGAAGTATCTGCCGCCCTGCTGGCGCTGGCCAAGGGCAGTGGCGCAACGCTG ATCGTGGCAGGCGCCTACGGCCATTCACGCATCGGCGAACGCCTGTTCGGCGGCACCAGCAAGCGCCTTCTCAGCGCCGA TGAGGCCCCGGCCCTGGCGCTTGCCCGTTAA
Upstream 100 bases:
>100_bases TCGCGCCTAAGTAGACTTCCCTAGTCCGGAACCATGCCTCTGCTGTTACGTTCATGTTATAACTCCCGGCTGGGAGTGGT TGAACAGCAGGAGAGAGCCC
Downstream 100 bases:
>100_bases TCCACACTGTTCCTGGAGCTTCCCATGTCGCTGATGCGCATATCCCTGCAACTGGCCCTCAACCCCGGCGCCGACGCCGT TTCCGGGCAAGGCTATACGC
Product: universal stress protein family protein
Products: NA
Alternate protein names: Universal Stress Protein Family; UspA Domain Protein; Universal Stress Protein Family Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSVVAMLQGTPETDVETTRSALAMAQKLGTSLVGLCALPDPQAAVMLVTTPESTGLTAAAATNIIELQKEMLEKAEAAFR QGVGVTPGVESVFLHQVANAEAAAASAATLADAIIFPRNAARSGEPLSIAFDHVMMDARLPLVLAGTAAYTPGPVIIGWD GSNGAARALRFHIPLLKAAGEVIIAQNRKDAERDGARPGIEPGSLEDWLKRKGIKSSVSPIEGEVSAALLALAKGSGATL IVAGAYGHSRIGERLFGGTSKRLLSADEAPALALAR
Sequences:
>Translated_276_residues MSVVAMLQGTPETDVETTRSALAMAQKLGTSLVGLCALPDPQAAVMLVTTPESTGLTAAAATNIIELQKEMLEKAEAAFR QGVGVTPGVESVFLHQVANAEAAAASAATLADAIIFPRNAARSGEPLSIAFDHVMMDARLPLVLAGTAAYTPGPVIIGWD GSNGAARALRFHIPLLKAAGEVIIAQNRKDAERDGARPGIEPGSLEDWLKRKGIKSSVSPIEGEVSAALLALAKGSGATL IVAGAYGHSRIGERLFGGTSKRLLSADEAPALALAR >Mature_275_residues SVVAMLQGTPETDVETTRSALAMAQKLGTSLVGLCALPDPQAAVMLVTTPESTGLTAAAATNIIELQKEMLEKAEAAFRQ GVGVTPGVESVFLHQVANAEAAAASAATLADAIIFPRNAARSGEPLSIAFDHVMMDARLPLVLAGTAAYTPGPVIIGWDG SNGAARALRFHIPLLKAAGEVIIAQNRKDAERDGARPGIEPGSLEDWLKRKGIKSSVSPIEGEVSAALLALAKGSGATLI VAGAYGHSRIGERLFGGTSKRLLSADEAPALALAR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28364; Mature: 28233
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVAMLQGTPETDVETTRSALAMAQKLGTSLVGLCALPDPQAAVMLVTTPESTGLTAAA CCEEEEECCCCCCCHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEECCCCCCCHHHH ATNIIELQKEMLEKAEAAFRQGVGVTPGVESVFLHQVANAEAAAASAATLADAIIFPRNA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCC ARSGEPLSIAFDHVMMDARLPLVLAGTAAYTPGPVIIGWDGSNGAARALRFHIPLLKAAG CCCCCCEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHEEEEEECHHHHCCC EVIIAQNRKDAERDGARPGIEPGSLEDWLKRKGIKSSVSPIEGEVSAALLALAKGSGATL CEEEECCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEE IVAGAYGHSRIGERLFGGTSKRLLSADEAPALALAR EEEECCCCHHHHHHHHCCCHHHHHCCCCCCCEECCC >Mature Secondary Structure SVVAMLQGTPETDVETTRSALAMAQKLGTSLVGLCALPDPQAAVMLVTTPESTGLTAAA CEEEEECCCCCCCHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEECCCCCCCHHHH ATNIIELQKEMLEKAEAAFRQGVGVTPGVESVFLHQVANAEAAAASAATLADAIIFPRNA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCC ARSGEPLSIAFDHVMMDARLPLVLAGTAAYTPGPVIIGWDGSNGAARALRFHIPLLKAAG CCCCCCEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHEEEEEECHHHHCCC EVIIAQNRKDAERDGARPGIEPGSLEDWLKRKGIKSSVSPIEGEVSAALLALAKGSGATL CEEEECCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEE IVAGAYGHSRIGERLFGGTSKRLLSADEAPALALAR EEEECCCCHHHHHHHHCCCHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA