| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799675
Identifier: 114799675
GI number: 114799675
Start: 3074453
End: 3074995
Strand: Reverse
Name: 114799675
Synonym: HNE_2916
Alternate gene names: NA
Gene position: 3074995-3074453 (Counterclockwise)
Preceding gene: 114798421
Following gene: 114800406
Centisome position: 83.0
GC content: 60.41
Gene sequence:
>543_bases ATGTCGCATGTCATTACGAAATCTCGCCGGTTTATCGGAGCCACGGCCGCTTCTCTTCTCATCGCAGGCCTGGCCCATGC CGGTATCGAGATCGACGTCAGCGGCTCCAAAATTCCGGCGTCCAGCCTGACTTTCAGCGTCTCGCAGCAGGCCGTGTATG ATCCGGTCACCTATGCGCCGGTCGAACCGAAGCGTTCGGAACTCTACACCGGCTCGCTGTACGTCACGCGCAGCTTTGAC TCCTCGTCCGTGAAGGTGCTCAAGCATGTCATCGAAGGCACGCAGGTTCCCACCGTCGAGATCACGATGACCCGCGACGG TTCGCCCGAGCGTCAGGTGTGGAGCCTGACCAACGCGACCCTCAACAACTACTCGACCTATACGGCCGAGGGCAGTGAAG TGGTCGAGAACTTCGACATCTCTTATGAGAGCGCCACACTGAAAGTCTTCACCGGCGCCGGCAATACGCCCGCCGATACG CTGACCTGGAAGTCGGCTGCGCCCGTTGCCATGCCGGTCGAACCGGCTGCTGCGACGGAATAA
Upstream 100 bases:
>100_bases GCCAGCGTGCTGCCTTATTCCATCCTGAATCGGAGCGTCCTATGACAGTCAGGCGCCGGGGCGATTCCGCCGGGTGCGCC AAGCAAAGGGACACAACATC
Downstream 100 bases:
>100_bases TCCGGTATCCGGGCGGCGGGACATCTCCTGCCGCCCGGTAACTCCGCAAGAGGCAGATGCCTCAGGCCGCATTCTTGGCC TCAAGTGCACGCACCAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSHVITKSRRFIGATAASLLIAGLAHAGIEIDVSGSKIPASSLTFSVSQQAVYDPVTYAPVEPKRSELYTGSLYVTRSFD SSSVKVLKHVIEGTQVPTVEITMTRDGSPERQVWSLTNATLNNYSTYTAEGSEVVENFDISYESATLKVFTGAGNTPADT LTWKSAAPVAMPVEPAAATE
Sequences:
>Translated_180_residues MSHVITKSRRFIGATAASLLIAGLAHAGIEIDVSGSKIPASSLTFSVSQQAVYDPVTYAPVEPKRSELYTGSLYVTRSFD SSSVKVLKHVIEGTQVPTVEITMTRDGSPERQVWSLTNATLNNYSTYTAEGSEVVENFDISYESATLKVFTGAGNTPADT LTWKSAAPVAMPVEPAAATE >Mature_179_residues SHVITKSRRFIGATAASLLIAGLAHAGIEIDVSGSKIPASSLTFSVSQQAVYDPVTYAPVEPKRSELYTGSLYVTRSFDS SSVKVLKHVIEGTQVPTVEITMTRDGSPERQVWSLTNATLNNYSTYTAEGSEVVENFDISYESATLKVFTGAGNTPADTL TWKSAAPVAMPVEPAAATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19180; Mature: 19048
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVITKSRRFIGATAASLLIAGLAHAGIEIDVSGSKIPASSLTFSVSQQAVYDPVTYAP CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCHHCCCEEECC VEPKRSELYTGSLYVTRSFDSSSVKVLKHVIEGTQVPTVEITMTRDGSPERQVWSLTNAT CCCCCCEEEECEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCC LNNYSTYTAEGSEVVENFDISYESATLKVFTGAGNTPADTLTWKSAAPVAMPVEPAAATE CCCCEEEECCCHHHHHHCCCEECCEEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCC >Mature Secondary Structure SHVITKSRRFIGATAASLLIAGLAHAGIEIDVSGSKIPASSLTFSVSQQAVYDPVTYAP CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCHHCCCEEECC VEPKRSELYTGSLYVTRSFDSSSVKVLKHVIEGTQVPTVEITMTRDGSPERQVWSLTNAT CCCCCCEEEECEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCC LNNYSTYTAEGSEVVENFDISYESATLKVFTGAGNTPADTLTWKSAAPVAMPVEPAAATE CCCCEEEECCCHHHHHHCCCEECCEEEEEEECCCCCCCCCEEECCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA