Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is yjhP [C]

Identifier: 114799655

GI number: 114799655

Start: 2069506

End: 2070339

Strand: Reverse

Name: yjhP [C]

Synonym: HNE_1994

Alternate gene names: 114799655

Gene position: 2070339-2069506 (Counterclockwise)

Preceding gene: 114799206

Following gene: 114798889

Centisome position: 55.88

GC content: 59.11

Gene sequence:

>834_bases
ATGGATAACACCTCGCAGATTGAATACTGGAACGGCCCTGCCGGACAGAAATGGGTGCGTGACGCCGACAGAATGGATGT
CATGCTGGCGCCCTTTGTGGATGCGATCATTGCATCGGTTCTGCCCAGTCCCGGCCAGTCTGTGATGGACATCGGCTGTG
GCGCAGGCGCTTTATCGCTGAATTTGGCCGGCAGCGCTGTAAATGTCTCGGTGACGGGTGTGGATGTGTCTGCGCCGCTG
GTCGAACTTGCAAAGCAGAGATCTGCTGCTGTCAGTGCGGGGATCGAATTTATCGTCGCCGACGCAGCCGTCTGGAGACC
GAAAGAGCCGGTTGATCTTGTTATTTCCCGCTTCGGGGTGATGTTCTTTGCAGACCCAGTCGCGGCCTTTGCCAACATCC
GGGCCAGCGTGAAGCCGAAGGGCCGTCTGCGTTTTGCCTGCTGGCGTCCATTGCAGGAGAACGCCTGGGCGCTGACGCCG
TTGCAGGCCGCCATGCATCTTCTTACAACACCTCCAGCGCCCCCTCCACCCGGCACGCCCGGCCCCTTCGCTTTTGGGGA
TGCCGATTATGTAAACCGTGTGCTGATGGATAGCGGCTGGAGAAACATCACAGTCACGCCATGGGATGGTGACCTGGCAT
TGCCCGGAACAACAGCTGAAGAGAGCGCTGCATTCATGCTTGAGATGGGCCCTTTGTCGCGCGCAATGGGCGAGCAGGGG
ATTGATCCGGAAACGGTCAAGGGCGTTATTGTCGCCAAGCTCCAGGAGTTGGCTGGCGAGGATGGCCGTGTTCGCTTGAA
GGCGGCAGCATGGATCGTTGAGGCTGAAGCATGA

Upstream 100 bases:

>100_bases
ATTATGCGGCGGATTACTGCGCCTGGCCGCAAGCCAGCCAGCTGGCGCCGAAAGCTGCGCGGATGACGGCGCCGGGTTTC
CCGTCCTGAGGAAAGAAAAA

Downstream 100 bases:

>100_bases
GGGATGCTGTTGAGGTCAATTTCGATGGGTTGATCGGTCCGAGCCATAATTATGGGGGCCTGTCGGATGGCAACCTTGCG
AGTTCAAGGAATGCCGGTGA

Product: putative methyltransferase

Products: NA

Alternate protein names: Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Methyltransferase UbiE/COQ5 Family; SAM-Dependent Methyltransferase; Methlytransferase UbiE/COQ5 Family Protein; Methyltransferase Protein; UbiE/COQ5 Family Methlytransferase; UbiE/COQ5 Methyltransferase; UbiE/COQ5 Family Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Aklanonic Acid Methyl Transferase; Methyltransferase Domain Family

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDNTSQIEYWNGPAGQKWVRDADRMDVMLAPFVDAIIASVLPSPGQSVMDIGCGAGALSLNLAGSAVNVSVTGVDVSAPL
VELAKQRSAAVSAGIEFIVADAAVWRPKEPVDLVISRFGVMFFADPVAAFANIRASVKPKGRLRFACWRPLQENAWALTP
LQAAMHLLTTPPAPPPPGTPGPFAFGDADYVNRVLMDSGWRNITVTPWDGDLALPGTTAEESAAFMLEMGPLSRAMGEQG
IDPETVKGVIVAKLQELAGEDGRVRLKAAAWIVEAEA

Sequences:

>Translated_277_residues
MDNTSQIEYWNGPAGQKWVRDADRMDVMLAPFVDAIIASVLPSPGQSVMDIGCGAGALSLNLAGSAVNVSVTGVDVSAPL
VELAKQRSAAVSAGIEFIVADAAVWRPKEPVDLVISRFGVMFFADPVAAFANIRASVKPKGRLRFACWRPLQENAWALTP
LQAAMHLLTTPPAPPPPGTPGPFAFGDADYVNRVLMDSGWRNITVTPWDGDLALPGTTAEESAAFMLEMGPLSRAMGEQG
IDPETVKGVIVAKLQELAGEDGRVRLKAAAWIVEAEA
>Mature_277_residues
MDNTSQIEYWNGPAGQKWVRDADRMDVMLAPFVDAIIASVLPSPGQSVMDIGCGAGALSLNLAGSAVNVSVTGVDVSAPL
VELAKQRSAAVSAGIEFIVADAAVWRPKEPVDLVISRFGVMFFADPVAAFANIRASVKPKGRLRFACWRPLQENAWALTP
LQAAMHLLTTPPAPPPPGTPGPFAFGDADYVNRVLMDSGWRNITVTPWDGDLALPGTTAEESAAFMLEMGPLSRAMGEQG
IDPETVKGVIVAKLQELAGEDGRVRLKAAAWIVEAEA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29349; Mature: 29349

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTSQIEYWNGPAGQKWVRDADRMDVMLAPFVDAIIASVLPSPGQSVMDIGCGAGALSL
CCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCEEEE
NLAGSAVNVSVTGVDVSAPLVELAKQRSAAVSAGIEFIVADAAVWRPKEPVDLVISRFGV
EECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEECHHHCCCCCHHHHHHHHHHH
MFFADPVAAFANIRASVKPKGRLRFACWRPLQENAWALTPLQAAMHLLTTPPAPPPPGTP
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCC
GPFAFGDADYVNRVLMDSGWRNITVTPWDGDLALPGTTAEESAAFMLEMGPLSRAMGEQG
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCHHHHHHCCCC
IDPETVKGVIVAKLQELAGEDGRVRLKAAAWIVEAEA
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECC
>Mature Secondary Structure
MDNTSQIEYWNGPAGQKWVRDADRMDVMLAPFVDAIIASVLPSPGQSVMDIGCGAGALSL
CCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCEEEE
NLAGSAVNVSVTGVDVSAPLVELAKQRSAAVSAGIEFIVADAAVWRPKEPVDLVISRFGV
EECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEECHHHCCCCCHHHHHHHHHHH
MFFADPVAAFANIRASVKPKGRLRFACWRPLQENAWALTPLQAAMHLLTTPPAPPPPGTP
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCC
GPFAFGDADYVNRVLMDSGWRNITVTPWDGDLALPGTTAEESAAFMLEMGPLSRAMGEQG
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCHHHHHHCCCC
IDPETVKGVIVAKLQELAGEDGRVRLKAAAWIVEAEA
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA