| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is nemA [C]
Identifier: 114799651
GI number: 114799651
Start: 3102708
End: 3103814
Strand: Reverse
Name: nemA [C]
Synonym: HNE_2942
Alternate gene names: 114799651
Gene position: 3103814-3102708 (Counterclockwise)
Preceding gene: 114800016
Following gene: 114797131
Centisome position: 83.77
GC content: 62.51
Gene sequence:
>1107_bases ATGACCCGGACCCTGTTCACGCCTTTCCGGCTGAAAAACGTCGAACTTCCCAACCGTATCGTGATGGCGCCGATGACGCG CTCCAAGTCTCCAGGCGGCGTTCCAGGCGAAGATGTGGCTGATTATTACGCCCGCCGTGCCGCCGCCGATGTGGGCCTCC TGATCACCGAAGGCACCACGGTGCGCCGGGGTGGCTCGTCCAACGACCCCAATGTTCCCAATTTTTACAAGGCAGACGCG CTCGATGGCTGGTCGCGGGTTGTCTCCAAGGTTCACGCCAATGGCGGCAAGATTGCCCCCCAGATCTGGCACCAGGGCAT GGTGCGCAAGACCGGCACCGGGCCGGAGCCTGATGCGCCCACCGACAGCCCCTCGGGCGTCACCCATACCGGCAAACAGA TTTTGCCAGAGCCGACCAGCGCCGATGTCGACGACATGGTGATGGCGTTTGCAGACGCGGCCGCTGAATCCAAGCGTCTC GGCTTCGATACGCTGGAAATCCACGGCGCCCATGGCTACCTCGTCGACCAATTCTTCTGGGACGCGATGAACAAGCGCTC CGACAAATATGGCGGCAGCCTCACGGACCGCGCGAGCTTTGGCGGCGACATCATCCGTGAAATCCGCAAGAAGGTCGGCC CGGATCATCCGATCATCCTGCGCTATTCGCAGTGGAAGCAGCAGGACTATACCGCCCGCCTGGCGCCCACGCCGCAGGAG CTGGAAGCGTTCCTCAAGGTGTTCGTGGATGCGGGCGTTGACTGTCTGCACGTTTCCCAGCGCCGCTATTGGGAGCCTGA ATTCCCTGAGATCGACGGCGAACACGGCCTCAATGGCGCCGGCTGGGCAAAAAAGCTGACCGGCCTGCCCACCATCACGG TCGGCTCGGTTGGCCTCAACGGCGATTTCGAGAAATCCTTCGCCGGGGAAGGCGCTCCGCGCCGTTCACTCGACGACCTG GAAGCGCGTCTCGACAAGGGCGAGTTTGATCTCGTCGGCGTTGGCCGCGCGGTCCTTCAGGACCCGGAATGGGCCAAGAA GGTCAAGGAAGGCCGGTTCAACGAGATTTCCGACTATAACGGCAAGGCGCTGGCGACGCTTTACTAG
Upstream 100 bases:
>100_bases CGTCAGTTCAGGGGTGCCGCCCCTATACTGTAACGTCAATGGTTGACGCAGACCGGACACTTGCCCACTTCATCACCCGG TAAACTCAAGGAAACCGCCA
Downstream 100 bases:
>100_bases GCCGCCCGCCACTGCGAACACATCCAGTCTGGTCCGGCCTGCGTATCGGTTGAATAAGTTCAACCAGCAGACCGGACCAG ATCTCATGCGTGTTGCCCGT
Product: FAD/FMN-binding oxidoreductase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTRTLFTPFRLKNVELPNRIVMAPMTRSKSPGGVPGEDVADYYARRAAADVGLLITEGTTVRRGGSSNDPNVPNFYKADA LDGWSRVVSKVHANGGKIAPQIWHQGMVRKTGTGPEPDAPTDSPSGVTHTGKQILPEPTSADVDDMVMAFADAAAESKRL GFDTLEIHGAHGYLVDQFFWDAMNKRSDKYGGSLTDRASFGGDIIREIRKKVGPDHPIILRYSQWKQQDYTARLAPTPQE LEAFLKVFVDAGVDCLHVSQRRYWEPEFPEIDGEHGLNGAGWAKKLTGLPTITVGSVGLNGDFEKSFAGEGAPRRSLDDL EARLDKGEFDLVGVGRAVLQDPEWAKKVKEGRFNEISDYNGKALATLY
Sequences:
>Translated_368_residues MTRTLFTPFRLKNVELPNRIVMAPMTRSKSPGGVPGEDVADYYARRAAADVGLLITEGTTVRRGGSSNDPNVPNFYKADA LDGWSRVVSKVHANGGKIAPQIWHQGMVRKTGTGPEPDAPTDSPSGVTHTGKQILPEPTSADVDDMVMAFADAAAESKRL GFDTLEIHGAHGYLVDQFFWDAMNKRSDKYGGSLTDRASFGGDIIREIRKKVGPDHPIILRYSQWKQQDYTARLAPTPQE LEAFLKVFVDAGVDCLHVSQRRYWEPEFPEIDGEHGLNGAGWAKKLTGLPTITVGSVGLNGDFEKSFAGEGAPRRSLDDL EARLDKGEFDLVGVGRAVLQDPEWAKKVKEGRFNEISDYNGKALATLY >Mature_367_residues TRTLFTPFRLKNVELPNRIVMAPMTRSKSPGGVPGEDVADYYARRAAADVGLLITEGTTVRRGGSSNDPNVPNFYKADAL DGWSRVVSKVHANGGKIAPQIWHQGMVRKTGTGPEPDAPTDSPSGVTHTGKQILPEPTSADVDDMVMAFADAAAESKRLG FDTLEIHGAHGYLVDQFFWDAMNKRSDKYGGSLTDRASFGGDIIREIRKKVGPDHPIILRYSQWKQQDYTARLAPTPQEL EAFLKVFVDAGVDCLHVSQRRYWEPEFPEIDGEHGLNGAGWAKKLTGLPTITVGSVGLNGDFEKSFAGEGAPRRSLDDLE ARLDKGEFDLVGVGRAVLQDPEWAKKVKEGRFNEISDYNGKALATLY
Specific function: Reduces a range of alternative electron acceptors [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=365, Percent_Identity=26.8493150684932, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1789463, Length=381, Percent_Identity=27.0341207349081, Blast_Score=110, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17564188, Length=364, Percent_Identity=23.9010989010989, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17559804, Length=362, Percent_Identity=23.4806629834254, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI72001454, Length=356, Percent_Identity=23.5955056179775, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17559802, Length=355, Percent_Identity=23.6619718309859, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17540738, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17565138, Length=354, Percent_Identity=23.4463276836158, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321973, Length=355, Percent_Identity=27.6056338028169, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325086, Length=370, Percent_Identity=24.3243243243243, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR013027 - InterPro: IPR016040 - InterPro: IPR001155 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00724 Oxidored_FMN; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40348; Mature: 40217
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTLFTPFRLKNVELPNRIVMAPMTRSKSPGGVPGEDVADYYARRAAADVGLLITEGTT CCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCE VRRGGSSNDPNVPNFYKADALDGWSRVVSKVHANGGKIAPQIWHQGMVRKTGTGPEPDAP EECCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC TDSPSGVTHTGKQILPEPTSADVDDMVMAFADAAAESKRLGFDTLEIHGAHGYLVDQFFW CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH DAMNKRSDKYGGSLTDRASFGGDIIREIRKKVGPDHPIILRYSQWKQQDYTARLAPTPQE HHHHHCCHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEECCCCHHH LEAFLKVFVDAGVDCLHVSQRRYWEPEFPEIDGEHGLNGAGWAKKLTGLPTITVGSVGLN HHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCC GDFEKSFAGEGAPRRSLDDLEARLDKGEFDLVGVGRAVLQDPEWAKKVKEGRFNEISDYN CCCHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHCCCCCCCCCCC GKALATLY CCEEEEEC >Mature Secondary Structure TRTLFTPFRLKNVELPNRIVMAPMTRSKSPGGVPGEDVADYYARRAAADVGLLITEGTT CCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCE VRRGGSSNDPNVPNFYKADALDGWSRVVSKVHANGGKIAPQIWHQGMVRKTGTGPEPDAP EECCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC TDSPSGVTHTGKQILPEPTSADVDDMVMAFADAAAESKRLGFDTLEIHGAHGYLVDQFFW CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH DAMNKRSDKYGGSLTDRASFGGDIIREIRKKVGPDHPIILRYSQWKQQDYTARLAPTPQE HHHHHCCHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEECCCCHHH LEAFLKVFVDAGVDCLHVSQRRYWEPEFPEIDGEHGLNGAGWAKKLTGLPTITVGSVGLN HHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCC GDFEKSFAGEGAPRRSLDDLEARLDKGEFDLVGVGRAVLQDPEWAKKVKEGRFNEISDYN CCCHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHCCCCCCCCCCC GKALATLY CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8357835 [H]