| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is camA [H]
Identifier: 114799596
GI number: 114799596
Start: 1954986
End: 1956230
Strand: Direct
Name: camA [H]
Synonym: HNE_1888
Alternate gene names: 114799596
Gene position: 1954986-1956230 (Clockwise)
Preceding gene: 114797217
Following gene: 114800377
Centisome position: 52.77
GC content: 61.93
Gene sequence:
>1245_bases GTGGACCTTTCGGGCGCAAAACGGATTGTAATTGTCGGCGCTGGCCAGGCGGCTGCGCAGGCTGTTCAATCCTTGCGCCT GGGTGGTTATGCTGGCGAGCTCACAATCGTCGGTGAAGAGACGGCGCTTCCCTATCAGCGTCCCCCACTCTCGAAGGCTT ACATGAAGGGCGAGATGGCGGAGGAGCGCCTCTATTTCCGCCCCGCGGCCTGGTACGAAGACAACAAGATCGAAGTGATG CTGGGCTCCCGCGTCACCTCCATTGATCGCGCCGCGCGCGTCGCCCATCTCGAACATGGCGCCGAACTGCCTTACGACGC GCTGGTCATCGCCACAGGTTCCCGCCCCCGCACGCTTCCCTGCCAGGGCGCTGATTTGACCGGCGTTCACGATCTGCGCA GCCTGTCGGATGTCGAACGCATCCGCCCGCAAATGGTCGAAGGCCGCCGCATGGTCATAATCGGCGCCGGCTATATCGGC CTTGAAGCGGCAGCTGTCGCACGCACCATGGGTCTGGATGTCACTGTTCTGGAAATGGCACCGCGCGTTCTGGCGCGCGT TACAAGCCCTGTAATGAGCGAATTCTACGCCGCCGAGCACATCGCCAAAGGCGTCAAGATCCTCACCAGCACGGCCCTGT CGCATCTCGAAGGCAAGGACGGCCATATCAACGCCGCCGCGCTGGCCGATGGCACGAAGCTCCCGGCCGACATCGTCCTC GTCGGCATCGGCATCCTGCCCAATGAAGAGCTTGCAAAAGACGCCGGCATCGCCTGTTCCAACGGCATCCTGACCGACCG GGACGGCCGCACATCCGACCCGCACGTGTTTGCGGCCGGTGACTGCGCCAGCCGTCCGCTGGTTCACTATGGCCGTACAG GGCGCCTCGAAAGCGTCCACAACGCCATCGAGCAGGGCAAGCTCGTCGCCGCTGCCATTCTTGGACAAAATCGGCCGGCA GAGGACTGCCCCTGGTTCTGGTCGGACCAATATGACCTCAAACTCCAGATCGCCGGACTCAGTACGGACTATGACACGAT CGTCCTGCGCGGCGATCCTGAGGACCGCAAGTTTGCCGCTTTCTATCTGCGCAATGGCACCCTGATCGCCGTTGACGCCG TCAACAGCCCGCCAGAGTTCCTGGCATCCAAGAAACTCATCATGACAGGCGCAAAAATTGCCCCTGAAGTGCTCAGCGAC ACCTCAATCCCAATGAAAGACATCGCCGCAAAAGCTGCGGCCTGA
Upstream 100 bases:
>100_bases ACGGAGTGACCCTGCTTGCACTGCTTGCGGGCTGCGCTAGAAGTGCTTAGAACCAGACAAAAGTTGACGCTTGCGTCATA AATCATATCAAGGGGGCGTC
Downstream 100 bases:
>100_bases AGGAGACGGAAATCCACATGGCAAAGATCACCTATGTTTCGCATGACGGCACCGAACGCACGGTGGAAGCGAAGAACGGC GAATCTGTAATGGAAGCGGC
Product: pyridine nucleotide-disulfide oxidoreductase
Products: oxidized ferredoxin; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MDLSGAKRIVIVGAGQAAAQAVQSLRLGGYAGELTIVGEETALPYQRPPLSKAYMKGEMAEERLYFRPAAWYEDNKIEVM LGSRVTSIDRAARVAHLEHGAELPYDALVIATGSRPRTLPCQGADLTGVHDLRSLSDVERIRPQMVEGRRMVIIGAGYIG LEAAAVARTMGLDVTVLEMAPRVLARVTSPVMSEFYAAEHIAKGVKILTSTALSHLEGKDGHINAAALADGTKLPADIVL VGIGILPNEELAKDAGIACSNGILTDRDGRTSDPHVFAAGDCASRPLVHYGRTGRLESVHNAIEQGKLVAAAILGQNRPA EDCPWFWSDQYDLKLQIAGLSTDYDTIVLRGDPEDRKFAAFYLRNGTLIAVDAVNSPPEFLASKKLIMTGAKIAPEVLSD TSIPMKDIAAKAAA
Sequences:
>Translated_414_residues MDLSGAKRIVIVGAGQAAAQAVQSLRLGGYAGELTIVGEETALPYQRPPLSKAYMKGEMAEERLYFRPAAWYEDNKIEVM LGSRVTSIDRAARVAHLEHGAELPYDALVIATGSRPRTLPCQGADLTGVHDLRSLSDVERIRPQMVEGRRMVIIGAGYIG LEAAAVARTMGLDVTVLEMAPRVLARVTSPVMSEFYAAEHIAKGVKILTSTALSHLEGKDGHINAAALADGTKLPADIVL VGIGILPNEELAKDAGIACSNGILTDRDGRTSDPHVFAAGDCASRPLVHYGRTGRLESVHNAIEQGKLVAAAILGQNRPA EDCPWFWSDQYDLKLQIAGLSTDYDTIVLRGDPEDRKFAAFYLRNGTLIAVDAVNSPPEFLASKKLIMTGAKIAPEVLSD TSIPMKDIAAKAAA >Mature_414_residues MDLSGAKRIVIVGAGQAAAQAVQSLRLGGYAGELTIVGEETALPYQRPPLSKAYMKGEMAEERLYFRPAAWYEDNKIEVM LGSRVTSIDRAARVAHLEHGAELPYDALVIATGSRPRTLPCQGADLTGVHDLRSLSDVERIRPQMVEGRRMVIIGAGYIG LEAAAVARTMGLDVTVLEMAPRVLARVTSPVMSEFYAAEHIAKGVKILTSTALSHLEGKDGHINAAALADGTKLPADIVL VGIGILPNEELAKDAGIACSNGILTDRDGRTSDPHVFAAGDCASRPLVHYGRTGRLESVHNAIEQGKLVAAAILGQNRPA EDCPWFWSDQYDLKLQIAGLSTDYDTIVLRGDPEDRKFAAFYLRNGTLIAVDAVNSPPEFLASKKLIMTGAKIAPEVLSD TSIPMKDIAAKAAA
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389617, Length=393, Percent_Identity=29.7709923664122, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI226437568, Length=393, Percent_Identity=29.7709923664122, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI65787454, Length=393, Percent_Identity=29.7709923664122, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI22202629, Length=346, Percent_Identity=26.0115606936416, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4757732, Length=346, Percent_Identity=26.0115606936416, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI195927006, Length=176, Percent_Identity=27.8409090909091, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1788892, Length=402, Percent_Identity=39.5522388059701, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1789065, Length=312, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1789765, Length=283, Percent_Identity=30.7420494699647, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1786307, Length=225, Percent_Identity=28, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082354, Length=255, Percent_Identity=28.6274509803922, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17559934, Length=378, Percent_Identity=26.984126984127, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24639257, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI281359715, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI281359713, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24639250, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI18543267, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24639252, Length=389, Percent_Identity=28.2776349614396, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24585130, Length=372, Percent_Identity=26.3440860215054, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI28573993, Length=372, Percent_Identity=26.0752688172043, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24581020, Length=372, Percent_Identity=26.0752688172043, Blast_Score=106, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3
Molecular weight: Translated: 44260; Mature: 44260
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSGAKRIVIVGAGQAAAQAVQSLRLGGYAGELTIVGEETALPYQRPPLSKAYMKGEMA CCCCCCCEEEEEECCHHHHHHHHHHHCCCEECEEEEEECCCCCCCCCCCCHHHHHHCHHH EERLYFRPAAWYEDNKIEVMLGSRVTSIDRAARVAHLEHGAELPYDALVIATGSRPRTLP HHHEEECCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC CQGADLTGVHDLRSLSDVERIRPQMVEGRRMVIIGAGYIGLEAAAVARTMGLDVTVLEMA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHH PRVLARVTSPVMSEFYAAEHIAKGVKILTSTALSHLEGKDGHINAAALADGTKLPADIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEE VGIGILPNEELAKDAGIACSNGILTDRDGRTSDPHVFAAGDCASRPLVHYGRTGRLESVH EEECCCCCHHHHHHCCCEECCCEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHH NAIEQGKLVAAAILGQNRPAEDCPWFWSDQYDLKLQIAGLSTDYDTIVLRGDPEDRKFAA HHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEE FYLRNGTLIAVDAVNSPPEFLASKKLIMTGAKIAPEVLSDTSIPMKDIAAKAAA EEEECCCEEEEECCCCCHHHHHCCHHEEECCHHCHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure MDLSGAKRIVIVGAGQAAAQAVQSLRLGGYAGELTIVGEETALPYQRPPLSKAYMKGEMA CCCCCCCEEEEEECCHHHHHHHHHHHCCCEECEEEEEECCCCCCCCCCCCHHHHHHCHHH EERLYFRPAAWYEDNKIEVMLGSRVTSIDRAARVAHLEHGAELPYDALVIATGSRPRTLP HHHEEECCCCEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC CQGADLTGVHDLRSLSDVERIRPQMVEGRRMVIIGAGYIGLEAAAVARTMGLDVTVLEMA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHH PRVLARVTSPVMSEFYAAEHIAKGVKILTSTALSHLEGKDGHINAAALADGTKLPADIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEE VGIGILPNEELAKDAGIACSNGILTDRDGRTSDPHVFAAGDCASRPLVHYGRTGRLESVH EEECCCCCHHHHHHCCCEECCCEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHH NAIEQGKLVAAAILGQNRPAEDCPWFWSDQYDLKLQIAGLSTDYDTIVLRGDPEDRKFAA HHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEE FYLRNGTLIAVDAVNSPPEFLASKKLIMTGAKIAPEVLSDTSIPMKDIAAKAAA EEEECCCEEEEECCCCCHHHHHCCHHEEECCHHCHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced ferredoxin; NAD+
Specific reaction: reduced ferredoxin + NAD+ = oxidized ferredoxin + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]