| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799578
Identifier: 114799578
GI number: 114799578
Start: 2441015
End: 2441818
Strand: Reverse
Name: 114799578
Synonym: HNE_2336
Alternate gene names: NA
Gene position: 2441818-2441015 (Counterclockwise)
Preceding gene: 114799260
Following gene: 114800328
Centisome position: 65.91
GC content: 59.33
Gene sequence:
>804_bases ATGAAGATCGCGCACTTTGCGGACCTCCACTTTGGCCGCGAAGATAAAGACGCCCTGCAGGCTGCCAGCGAACTCGTACA GGAACTTGATGTGGATGCGATTGTCGTTTCCGGCGATCTCACCCAGCGTGGCAAGCGCGAGGAATTTGAGGCAGCACAAT TATGGCTTGCGCAGTTCAAAGCGCCGCTCATTTGCGTGCCGGGCAATCACGATACACCGCTTCTCAATCTTGCCGCGCGC GCTTCAGACGCTTTTGGCAGGTACGATAACTATTTCGCGGCCCATGCCGGGCCGCTGGATATAGATGGCGCGTCGATCCG CGGGTTGAATACGGCACGCGGCTGGCAGACGCGGATGAACTGGGCAGAGGGGCGGGTCAATCTCGACGACCTCGACAGCG CCATTGGGCATTCCGGCGATCATCGCCTGCATATCATCGCCTGCCACCACCCCTTTGTGTCGCCGACACTGGCGGGCCTG CAAACCGAAACCAAGCGGGGCCAGGAAGCCAGCCGGCGGATTGCCGACAGCGCCGTGCAAATCCTCATGACCGGCCATGT GCATACGCCGCATGCGGAAGTTATCCGTGAAAGTGATGGCGGATACATCGCGATCACGGCCGGCACATTGTCCACACGGC TCAGGGCGCAGCCGCCGGCATTCAATATTCTGTCTGTCCGGGATGGTATTGCTGCGCTCAATGTTCAGAGTTTTCGTGAC GGACGCTTCCATGAAGGCACGCACGGTGTTTGGGATCTGGAGACTCTGGAACCGATCAGTACACCGCGCGTTGTCACACC ATAG
Upstream 100 bases:
>100_bases TTCCGGCAACGATTGATGGCGAACCCTGCGAGCCAGGCCCCAGCCTCAGCATTTCCTACATTCAGAAGGCGGCATGCGTG CTGGTGGCTGGAGGTGAGGC
Downstream 100 bases:
>100_bases TCGCGGAAGGAGCGGAAGAATGCGTAAATCAGTACTTGGAATGAGCGTCGCCGTCGTCGCGGGAATGGCCTTGGCCGCCT GTGGAAACGACCCTGAGCCC
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Transcriptional Regulator Icc Related Protein; Metallophosphoesterase Protein; Phosphodiesterase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKIAHFADLHFGREDKDALQAASELVQELDVDAIVVSGDLTQRGKREEFEAAQLWLAQFKAPLICVPGNHDTPLLNLAAR ASDAFGRYDNYFAAHAGPLDIDGASIRGLNTARGWQTRMNWAEGRVNLDDLDSAIGHSGDHRLHIIACHHPFVSPTLAGL QTETKRGQEASRRIADSAVQILMTGHVHTPHAEVIRESDGGYIAITAGTLSTRLRAQPPAFNILSVRDGIAALNVQSFRD GRFHEGTHGVWDLETLEPISTPRVVTP
Sequences:
>Translated_267_residues MKIAHFADLHFGREDKDALQAASELVQELDVDAIVVSGDLTQRGKREEFEAAQLWLAQFKAPLICVPGNHDTPLLNLAAR ASDAFGRYDNYFAAHAGPLDIDGASIRGLNTARGWQTRMNWAEGRVNLDDLDSAIGHSGDHRLHIIACHHPFVSPTLAGL QTETKRGQEASRRIADSAVQILMTGHVHTPHAEVIRESDGGYIAITAGTLSTRLRAQPPAFNILSVRDGIAALNVQSFRD GRFHEGTHGVWDLETLEPISTPRVVTP >Mature_267_residues MKIAHFADLHFGREDKDALQAASELVQELDVDAIVVSGDLTQRGKREEFEAAQLWLAQFKAPLICVPGNHDTPLLNLAAR ASDAFGRYDNYFAAHAGPLDIDGASIRGLNTARGWQTRMNWAEGRVNLDDLDSAIGHSGDHRLHIIACHHPFVSPTLAGL QTETKRGQEASRRIADSAVQILMTGHVHTPHAEVIRESDGGYIAITAGTLSTRLRAQPPAFNILSVRDGIAALNVQSFRD GRFHEGTHGVWDLETLEPISTPRVVTP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29170; Mature: 29170
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAHFADLHFGREDKDALQAASELVQELDVDAIVVSGDLTQRGKREEFEAAQLWLAQFK CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC APLICVPGNHDTPLLNLAARASDAFGRYDNYFAAHAGPLDIDGASIRGLNTARGWQTRMN CCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCC WAEGRVNLDDLDSAIGHSGDHRLHIIACHHPFVSPTLAGLQTETKRGQEASRRIADSAVQ HHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHE ILMTGHVHTPHAEVIRESDGGYIAITAGTLSTRLRAQPPAFNILSVRDGIAALNVQSFRD EEEECCCCCCHHHHEEECCCCEEEEECCCCCHHHCCCCCCCEEEEECCCCEEEEHHHCCC GRFHEGTHGVWDLETLEPISTPRVVTP CCCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKIAHFADLHFGREDKDALQAASELVQELDVDAIVVSGDLTQRGKREEFEAAQLWLAQFK CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC APLICVPGNHDTPLLNLAARASDAFGRYDNYFAAHAGPLDIDGASIRGLNTARGWQTRMN CCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCC WAEGRVNLDDLDSAIGHSGDHRLHIIACHHPFVSPTLAGLQTETKRGQEASRRIADSAVQ HHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHE ILMTGHVHTPHAEVIRESDGGYIAITAGTLSTRLRAQPPAFNILSVRDGIAALNVQSFRD EEEECCCCCCHHHHEEECCCCEEEEECCCCCHHHCCCCCCCEEEEECCCCEEEEHHHCCC GRFHEGTHGVWDLETLEPISTPRVVTP CCCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA