| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799573
Identifier: 114799573
GI number: 114799573
Start: 1765486
End: 1766685
Strand: Direct
Name: 114799573
Synonym: HNE_1722
Alternate gene names: NA
Gene position: 1765486-1766685 (Clockwise)
Preceding gene: 114798627
Following gene: 114800185
Centisome position: 47.65
GC content: 54.17
Gene sequence:
>1200_bases ATGAGCGGCGTGATCGAAAGCCCGCTCGCCGCGATTCTGGCGGAAACGCGGCGGCAGCTGGGTCAGGACTATGCATGGCC GGATCCTTCAAGCGGGTTAGCGTATCTTCTGCTAAAACGTCATCAAAAGTCCTTGAAAGGTGTTATGGCGTCAACGCCGC CATCGGTTGATGCGCAGTTATTGCGCCGATCGCCAGTGCTTGCGGCATATGGATACCTTGCTGATCAGTTGAGCGATGGC GACCAAAGCAGTTGGATGGAAGCCGTAGAGCATCTGCGCGGGCGAGATCCGTACCCGGCCAATCGCGATTCCTTCGTGCA CAATCCAATCGAAGTGCTAGGCCTTGCTCATGGATTGACGATCCTCAGAGACGATCAGGCAGGGCATCGCTCTTGGCTGT CTTCGGTTTTGAGACGGGGGTTGAACAAGAATGAACTTGAGACCGCGTCTACGCGCTGCGCCGCCAATCTGGCCATCGCG CAGCTAGAGGGCGCACCAGCTGAACCGAATGCCACCCCGGATTATCAAACGCTCCCCATGCCGGATCTCATTTTGCTCTC AGCATTGGCGTTGGCTTTTCCTTCAGAGGGTGTACTGGAGATTCACGACATTGAGGCCGCCCTGCAAACCAAGCTTCTGC GTGAAGCGATCTCAATCAGCGATGTGGCTTCGGCAGCTGCACTCAGCGTGTTTGCTGAACGGCTGATTGATCGGTTTTCC CTTGGCCCTCAATCCTCCACGACCCTTGAAAAAGTCGAGGCACTATGTCGGCGCTTTCCTCTGCTCTCCCATGCGCTGCA AAGACGTTATGCCGGTCGCCCTAGTTTTGAGATCAATGATGAATATGATGTACAAGATCTTTTTGGCGCGATCCTCCATC TTCATTTTGATGATGTTCGCTCGGAAGAGGTAACGCCCTCATATGCGGGGAATAGCTCCCGGGTTGATTTCTACTTACCT GAGGCGCGGATGATTGTTGAGGTCAAAATGACCCGAAAAAGTCTGGGTCAAAAAGAGGTCGTAAACCAGCTTATAGAGGA CGCCGCCCGGTACGCTGCTATGGACCATGTTGATACACTAGTATGTTTGGTCTTTGACCCTCATAGATACTGTAAGAACC CAGCCGCGATCGAGGCGGATGTAGCAGAAAGCGGACGGCGCCTGCGCGTGGTACCAATCGTTTGTCCCAAAGGCCTATGA
Upstream 100 bases:
>100_bases CGAACCGGGCAGGATCGAACAGGGGCTCGGGCGGGGGCGGTGTACCGAACTGGTCGACCACGGCGCTCGATGTGAAGCTG AAACACAGCCGCTGGTTTCT
Downstream 100 bases:
>100_bases AAACGCCCTCCACTCTGCGGACCCTATTTCAGAAGGGAGAGCCTTTTCTCATGCATCCGCGAGACCTCAACCGCATTGGG CAAGCTGATCATGCGGCCCT
Product: malate dehydrogenase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSGVIESPLAAILAETRRQLGQDYAWPDPSSGLAYLLLKRHQKSLKGVMASTPPSVDAQLLRRSPVLAAYGYLADQLSDG DQSSWMEAVEHLRGRDPYPANRDSFVHNPIEVLGLAHGLTILRDDQAGHRSWLSSVLRRGLNKNELETASTRCAANLAIA QLEGAPAEPNATPDYQTLPMPDLILLSALALAFPSEGVLEIHDIEAALQTKLLREAISISDVASAAALSVFAERLIDRFS LGPQSSTTLEKVEALCRRFPLLSHALQRRYAGRPSFEINDEYDVQDLFGAILHLHFDDVRSEEVTPSYAGNSSRVDFYLP EARMIVEVKMTRKSLGQKEVVNQLIEDAARYAAMDHVDTLVCLVFDPHRYCKNPAAIEADVAESGRRLRVVPIVCPKGL
Sequences:
>Translated_399_residues MSGVIESPLAAILAETRRQLGQDYAWPDPSSGLAYLLLKRHQKSLKGVMASTPPSVDAQLLRRSPVLAAYGYLADQLSDG DQSSWMEAVEHLRGRDPYPANRDSFVHNPIEVLGLAHGLTILRDDQAGHRSWLSSVLRRGLNKNELETASTRCAANLAIA QLEGAPAEPNATPDYQTLPMPDLILLSALALAFPSEGVLEIHDIEAALQTKLLREAISISDVASAAALSVFAERLIDRFS LGPQSSTTLEKVEALCRRFPLLSHALQRRYAGRPSFEINDEYDVQDLFGAILHLHFDDVRSEEVTPSYAGNSSRVDFYLP EARMIVEVKMTRKSLGQKEVVNQLIEDAARYAAMDHVDTLVCLVFDPHRYCKNPAAIEADVAESGRRLRVVPIVCPKGL >Mature_398_residues SGVIESPLAAILAETRRQLGQDYAWPDPSSGLAYLLLKRHQKSLKGVMASTPPSVDAQLLRRSPVLAAYGYLADQLSDGD QSSWMEAVEHLRGRDPYPANRDSFVHNPIEVLGLAHGLTILRDDQAGHRSWLSSVLRRGLNKNELETASTRCAANLAIAQ LEGAPAEPNATPDYQTLPMPDLILLSALALAFPSEGVLEIHDIEAALQTKLLREAISISDVASAAALSVFAERLIDRFSL GPQSSTTLEKVEALCRRFPLLSHALQRRYAGRPSFEINDEYDVQDLFGAILHLHFDDVRSEEVTPSYAGNSSRVDFYLPE ARMIVEVKMTRKSLGQKEVVNQLIEDAARYAAMDHVDTLVCLVFDPHRYCKNPAAIEADVAESGRRLRVVPIVCPKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43942; Mature: 43811
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVIESPLAAILAETRRQLGQDYAWPDPSSGLAYLLLKRHQKSLKGVMASTPPSVDAQL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH LRRSPVLAAYGYLADQLSDGDQSSWMEAVEHLRGRDPYPANRDSFVHNPIEVLGLAHGLT HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCE ILRDDQAGHRSWLSSVLRRGLNKNELETASTRCAANLAIAQLEGAPAEPNATPDYQTLPM EEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PDLILLSALALAFPSEGVLEIHDIEAALQTKLLREAISISDVASAAALSVFAERLIDRFS HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LGPQSSTTLEKVEALCRRFPLLSHALQRRYAGRPSFEINDEYDVQDLFGAILHLHFDDVR CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SEEVTPSYAGNSSRVDFYLPEARMIVEVKMTRKSLGQKEVVNQLIEDAARYAAMDHVDTL CCCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE VCLVFDPHRYCKNPAAIEADVAESGRRLRVVPIVCPKGL EEEEECCHHHHCCCCCEECHHHHCCCEEEEEEEECCCCC >Mature Secondary Structure SGVIESPLAAILAETRRQLGQDYAWPDPSSGLAYLLLKRHQKSLKGVMASTPPSVDAQL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH LRRSPVLAAYGYLADQLSDGDQSSWMEAVEHLRGRDPYPANRDSFVHNPIEVLGLAHGLT HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCE ILRDDQAGHRSWLSSVLRRGLNKNELETASTRCAANLAIAQLEGAPAEPNATPDYQTLPM EEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PDLILLSALALAFPSEGVLEIHDIEAALQTKLLREAISISDVASAAALSVFAERLIDRFS HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LGPQSSTTLEKVEALCRRFPLLSHALQRRYAGRPSFEINDEYDVQDLFGAILHLHFDDVR CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SEEVTPSYAGNSSRVDFYLPEARMIVEVKMTRKSLGQKEVVNQLIEDAARYAAMDHVDTL CCCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE VCLVFDPHRYCKNPAAIEADVAESGRRLRVVPIVCPKGL EEEEECCHHHHCCCCCEECHHHHCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA