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The map label for this gene is ydfG [C]

Identifier: 114799498

GI number: 114799498

Start: 2292141

End: 2293235

Strand: Reverse

Name: ydfG [C]

Synonym: HNE_2196

Alternate gene names: 114799498

Gene position: 2293235-2292141 (Counterclockwise)

Preceding gene: 114798698

Following gene: 114797925

Centisome position: 61.9

GC content: 63.56

Gene sequence:

>1095_bases
ATGACATCGCCCCAAGATTACCGGCAAACCCCGCCGGAGCCTGATCACCGTGGCGGAGGGCTCTCACGTCGCTCCCTCCT
GGGAATGGCCGCCATCGGGACAACAATCGCTGCGGTTGGTATCGGTGGGACCCGGCTCTGGACCGGATCATCGGAGATCC
CCGACTGGACGTATAAGGACATCCCGCCTCAGAACGGGCGCCGTGTGCTCGTGACCGGTGCCAATGGGTATCCGGAGGAA
GATCGCAGCGGGCTGGGCTACCATATCGCGCTCGGTCTGGCGCGCGCGGGCGCCGACGTGATTATTGCTTCGCGCAATCA
GACGCGCGGTGAAGAAGCGATCCGCAGGATCGGCGCCGAAAGTCCCGCCGGAAGGGTTCGGTTCGAGACGCTCGATCTCG
CCGACCTTAAATCCGTCAAGGACTTCACGGCTCGGATGCAGGCATCGGGCAACGGCCTCGACCTTTTGGTCAATAATGCC
GGCACGATGGGAACACTGGAGCGTCAGGAGAGCATCGACGGGTTTGAGCGGGTTTTCGCGACCAACGCGATCGGCCCTTT
CGCCCTCACCGCCGGATTGCTGCCGCTTCTCCGCAACGGCAACGCCCCCCGGATTGTCTGGATGTGTAGCGGGCGCAGTG
CCTTCGGCGCGCTCGACCTTGACGATTTGCAGCAGGAAAACGCCTATGAGTATGCGAGCGCTTACAACGACTCCAAGCAG
GCGCACCTTATCGCGGCCCTTGAATGCGAACGCCGCAGTCGTGCCCATGGCTGGGGCGTTGTCAGTATTGCAGCGCATCC
GGGCGTGGCGCGCACAAGTCTCATTCTGGATGGGCCGGGGCTCGACAGCGCGGAAGGGTGGCGCCGCCGGAACATGCCCT
TCATGTTTCAGGATGCCGCCCAGGGCGCGCTTCCGGCGCTCTACGCGGCTGTTTCGTCGCAAGCAGCGGGCGGGGCCTAT
TACGGGCCTAAGGGCCTCATGGGGATCAGAGGACTGCCGGGCGTGTCGCAGGTTCCGGACAATTCCCGCGATCCGCAACT
TGCCACGACCGTTTGGGAAACTCTCGAGCAGTTAGGGACTGTTTCCTTGCGCTGA

Upstream 100 bases:

>100_bases
GGCGGGGCCCTGCAGGATCAGGCAGGAAACTTCGAGCATCCGGCATAGCCTGGAGGGGCCGACCCGCTAGTCTTGCTGAA
CCCTGATTAGGAGATCCGAC

Downstream 100 bases:

>100_bases
CTTCCAGGGGCAGGTGCCGGCGCAGGCGCCCGCTTTGCGTCATCTACCAGTCAGACGACAGACCATTTCGTGCAAGGATA
CCCCCTTTTGAAAGAACACA

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTSPQDYRQTPPEPDHRGGGLSRRSLLGMAAIGTTIAAVGIGGTRLWTGSSEIPDWTYKDIPPQNGRRVLVTGANGYPEE
DRSGLGYHIALGLARAGADVIIASRNQTRGEEAIRRIGAESPAGRVRFETLDLADLKSVKDFTARMQASGNGLDLLVNNA
GTMGTLERQESIDGFERVFATNAIGPFALTAGLLPLLRNGNAPRIVWMCSGRSAFGALDLDDLQQENAYEYASAYNDSKQ
AHLIAALECERRSRAHGWGVVSIAAHPGVARTSLILDGPGLDSAEGWRRRNMPFMFQDAAQGALPALYAAVSSQAAGGAY
YGPKGLMGIRGLPGVSQVPDNSRDPQLATTVWETLEQLGTVSLR

Sequences:

>Translated_364_residues
MTSPQDYRQTPPEPDHRGGGLSRRSLLGMAAIGTTIAAVGIGGTRLWTGSSEIPDWTYKDIPPQNGRRVLVTGANGYPEE
DRSGLGYHIALGLARAGADVIIASRNQTRGEEAIRRIGAESPAGRVRFETLDLADLKSVKDFTARMQASGNGLDLLVNNA
GTMGTLERQESIDGFERVFATNAIGPFALTAGLLPLLRNGNAPRIVWMCSGRSAFGALDLDDLQQENAYEYASAYNDSKQ
AHLIAALECERRSRAHGWGVVSIAAHPGVARTSLILDGPGLDSAEGWRRRNMPFMFQDAAQGALPALYAAVSSQAAGGAY
YGPKGLMGIRGLPGVSQVPDNSRDPQLATTVWETLEQLGTVSLR
>Mature_363_residues
TSPQDYRQTPPEPDHRGGGLSRRSLLGMAAIGTTIAAVGIGGTRLWTGSSEIPDWTYKDIPPQNGRRVLVTGANGYPEED
RSGLGYHIALGLARAGADVIIASRNQTRGEEAIRRIGAESPAGRVRFETLDLADLKSVKDFTARMQASGNGLDLLVNNAG
TMGTLERQESIDGFERVFATNAIGPFALTAGLLPLLRNGNAPRIVWMCSGRSAFGALDLDDLQQENAYEYASAYNDSKQA
HLIAALECERRSRAHGWGVVSIAAHPGVARTSLILDGPGLDSAEGWRRRNMPFMFQDAAQGALPALYAAVSSQAAGGAYY
GPKGLMGIRGLPGVSQVPDNSRDPQLATTVWETLEQLGTVSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI225579078, Length=252, Percent_Identity=36.5079365079365, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI193804850, Length=270, Percent_Identity=31.4814814814815, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI10190746, Length=280, Percent_Identity=35, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI186928839, Length=258, Percent_Identity=33.7209302325581, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI146231950, Length=302, Percent_Identity=34.1059602649007, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI7706523, Length=308, Percent_Identity=31.4935064935065, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI166795268, Length=291, Percent_Identity=29.2096219931272, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI19923931, Length=167, Percent_Identity=38.3233532934132, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI13375997, Length=196, Percent_Identity=29.0816326530612, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI72534732, Length=159, Percent_Identity=29.559748427673, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17558006, Length=267, Percent_Identity=27.3408239700375, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193207620, Length=291, Percent_Identity=30.5841924398625, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17505416, Length=278, Percent_Identity=29.136690647482, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17532805, Length=311, Percent_Identity=29.903536977492, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71992402, Length=294, Percent_Identity=26.530612244898, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17532791, Length=311, Percent_Identity=26.3665594855305, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI32565532, Length=195, Percent_Identity=31.7948717948718, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI72001364, Length=264, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28573296, Length=326, Percent_Identity=31.2883435582822, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI45554248, Length=285, Percent_Identity=32.9824561403509, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24640117, Length=285, Percent_Identity=32.9824561403509, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI20129347, Length=273, Percent_Identity=31.1355311355311, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI45553409, Length=268, Percent_Identity=30.2238805970149, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24647948, Length=268, Percent_Identity=30.2238805970149, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI22024069, Length=211, Percent_Identity=35.0710900473934, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24647946, Length=268, Percent_Identity=30.2238805970149, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI19921754, Length=259, Percent_Identity=30.8880308880309, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI161076371, Length=262, Percent_Identity=30.9160305343511, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24586328, Length=212, Percent_Identity=33.0188679245283, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24656154, Length=264, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI19922628, Length=264, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24647931, Length=279, Percent_Identity=28.673835125448, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21358495, Length=217, Percent_Identity=30.4147465437788, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38846; Mature: 38715

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPQDYRQTPPEPDHRGGGLSRRSLLGMAAIGTTIAAVGIGGTRLWTGSSEIPDWTYKD
CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
IPPQNGRRVLVTGANGYPEEDRSGLGYHIALGLARAGADVIIASRNQTRGEEAIRRIGAE
CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCHHHHHHHHCCC
SPAGRVRFETLDLADLKSVKDFTARMQASGNGLDLLVNNAGTMGTLERQESIDGFERVFA
CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
TNAIGPFALTAGLLPLLRNGNAPRIVWMCSGRSAFGALDLDDLQQENAYEYASAYNDSKQ
HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHCCCCCC
AHLIAALECERRSRAHGWGVVSIAAHPGVARTSLILDGPGLDSAEGWRRRNMPFMFQDAA
EEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEHHHH
QGALPALYAAVSSQAAGGAYYGPKGLMGIRGLPGVSQVPDNSRDPQLATTVWETLEQLGT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VSLR
CCCC
>Mature Secondary Structure 
TSPQDYRQTPPEPDHRGGGLSRRSLLGMAAIGTTIAAVGIGGTRLWTGSSEIPDWTYKD
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
IPPQNGRRVLVTGANGYPEEDRSGLGYHIALGLARAGADVIIASRNQTRGEEAIRRIGAE
CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCHHHHHHHHCCC
SPAGRVRFETLDLADLKSVKDFTARMQASGNGLDLLVNNAGTMGTLERQESIDGFERVFA
CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
TNAIGPFALTAGLLPLLRNGNAPRIVWMCSGRSAFGALDLDDLQQENAYEYASAYNDSKQ
HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHCCCCCC
AHLIAALECERRSRAHGWGVVSIAAHPGVARTSLILDGPGLDSAEGWRRRNMPFMFQDAA
EEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEHHHH
QGALPALYAAVSSQAAGGAYYGPKGLMGIRGLPGVSQVPDNSRDPQLATTVWETLEQLGT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VSLR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]