| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799464
Identifier: 114799464
GI number: 114799464
Start: 2039612
End: 2040907
Strand: Direct
Name: 114799464
Synonym: HNE_1970
Alternate gene names: NA
Gene position: 2039612-2040907 (Clockwise)
Preceding gene: 114799823
Following gene: 114800552
Centisome position: 55.05
GC content: 59.88
Gene sequence:
>1296_bases ATGAAGAAACTACTCCTGAGCGTGGCGTTTGGCGCACTTCTTACAGCCTGCGCGCCCGACGTGCCGCAGACGGCGGATAC TGCCGCGGCACCGGCTGCCGAAGCAGAAGCTCCAACGCAAGAGCGGTCCGCCGCTGAGGAGATGCACTTCCGCACGCTGG TGCTGGATACTCACCTTGATACCCCCGCCTATTTCCATGATCCCAGCTACACCTTCTCAAAGAAGGGCAGCTTCGACGAA GACGGCACCCATGTGGACCTGCCCCGCATGAATGAAGGCGGCCTGGATGGTGGCTTCTGGGTCATCTTCACCCCGCAAGG CCCGCTGGATGAAGCCTCCTATCTGGCAGCCCGCAACATGGCGGTGCTCCGCCAGATGTCGATCCGGGAATTTGCGGCGA AGTATGCAGGCGATGTCGAACTCGCCTTCTCGACCTCCGATGCAGAGCGCATCGCAGCAGCGGGCAAAAAGATCGTCTTC CAGAGCATGGAGAACTCCTATCCGCTGGGCACTGATATTTCGATGCTCGACACCTTCTATGTCGGCGGCCTTCGGATGAT TGCCCCGGTACACTTCCGTAACAATCAGTTTGCGGACAGCGCGACCGATGTGAATGAAGTTTTCGGTGGCCTCAGCCCTC TGGGAGAGGAACTGGTGCGCGAAGCAAACCGGCTTGGCCTTATTCTGGACGGCTCGCACGCATCTGACGGAACCGTGCGC GACATGCTGGAGATTTCGACGACGCCGCTGATCCTTTCACACTCCGGCCCAAAGGCGGTTTACGACCACCCTCGCAACGT TCCCGACGACCTGCTGATCGCTATCGCAGAGGACGGCGGCGTCATTCAGATCAATGCTTATGGCAGCTACCTGGAAGCCC TGCCCGCAAGCCCAGAGCGCCTGGCGGCACTTGCCGAGCTCGAAGCCGAATTTGGCAGCGACACCTCCGCAATGGATGAA GCAACCATGACGGCCTATCGCGCCGCGTATGAAACGGTGAACACGTCCTTCCCGGCGCCTCGCTCCACCTTTGAGAAGTT CATGGAACATCTTCTCTACACGCTCGAACTCGTGGGCCCGGAACATGTCGGCGTCGGTGCAGACTGGGATGGCGGCGGCG GCGTTGATGGAATGAAGGACATTGTCGACCTTCCAAAGGTGACCGCAGCGCTGGTTGAGGCGGGCTACTCTGAGGAAGAC GTTGCAAATATCTGGGGCGGCAACGTCCTGCGGCTTATGTCGGAAGTGGATGCCGCGCGAAGCGCTGATCTCTCTTCCCC GCAAGTCCTGAACTGA
Upstream 100 bases:
>100_bases GGGCCTGACCTTTTCTTTGCATGCCCGGCGGTTGACCGCACGCGCTTACGGGTGAACATCCCGCAATCTTTGGACTCATA TTCTTGCGGGGCTTGATCGG
Downstream 100 bases:
>100_bases CGATGGAATGGCTGAGCGTCCTTCCGCCAGTAGCGGCTATTATCGTCGCCATCTGGTCACGGAACGTATATTGGGCGCTC GGCCTCGCCATTCTTCTTTC
Product: dipeptidase family protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKKLLLSVAFGALLTACAPDVPQTADTAAAPAAEAEAPTQERSAAEEMHFRTLVLDTHLDTPAYFHDPSYTFSKKGSFDE DGTHVDLPRMNEGGLDGGFWVIFTPQGPLDEASYLAARNMAVLRQMSIREFAAKYAGDVELAFSTSDAERIAAAGKKIVF QSMENSYPLGTDISMLDTFYVGGLRMIAPVHFRNNQFADSATDVNEVFGGLSPLGEELVREANRLGLILDGSHASDGTVR DMLEISTTPLILSHSGPKAVYDHPRNVPDDLLIAIAEDGGVIQINAYGSYLEALPASPERLAALAELEAEFGSDTSAMDE ATMTAYRAAYETVNTSFPAPRSTFEKFMEHLLYTLELVGPEHVGVGADWDGGGGVDGMKDIVDLPKVTAALVEAGYSEED VANIWGGNVLRLMSEVDAARSADLSSPQVLN
Sequences:
>Translated_431_residues MKKLLLSVAFGALLTACAPDVPQTADTAAAPAAEAEAPTQERSAAEEMHFRTLVLDTHLDTPAYFHDPSYTFSKKGSFDE DGTHVDLPRMNEGGLDGGFWVIFTPQGPLDEASYLAARNMAVLRQMSIREFAAKYAGDVELAFSTSDAERIAAAGKKIVF QSMENSYPLGTDISMLDTFYVGGLRMIAPVHFRNNQFADSATDVNEVFGGLSPLGEELVREANRLGLILDGSHASDGTVR DMLEISTTPLILSHSGPKAVYDHPRNVPDDLLIAIAEDGGVIQINAYGSYLEALPASPERLAALAELEAEFGSDTSAMDE ATMTAYRAAYETVNTSFPAPRSTFEKFMEHLLYTLELVGPEHVGVGADWDGGGGVDGMKDIVDLPKVTAALVEAGYSEED VANIWGGNVLRLMSEVDAARSADLSSPQVLN >Mature_431_residues MKKLLLSVAFGALLTACAPDVPQTADTAAAPAAEAEAPTQERSAAEEMHFRTLVLDTHLDTPAYFHDPSYTFSKKGSFDE DGTHVDLPRMNEGGLDGGFWVIFTPQGPLDEASYLAARNMAVLRQMSIREFAAKYAGDVELAFSTSDAERIAAAGKKIVF QSMENSYPLGTDISMLDTFYVGGLRMIAPVHFRNNQFADSATDVNEVFGGLSPLGEELVREANRLGLILDGSHASDGTVR DMLEISTTPLILSHSGPKAVYDHPRNVPDDLLIAIAEDGGVIQINAYGSYLEALPASPERLAALAELEAEFGSDTSAMDE ATMTAYRAAYETVNTSFPAPRSTFEKFMEHLLYTLELVGPEHVGVGADWDGGGGVDGMKDIVDLPKVTAALVEAGYSEED VANIWGGNVLRLMSEVDAARSADLSSPQVLN
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=426, Percent_Identity=26.7605633802817, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI189458885, Length=391, Percent_Identity=26.0869565217391, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI4758190, Length=391, Percent_Identity=26.0869565217391, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI193211608, Length=350, Percent_Identity=26, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI193211610, Length=350, Percent_Identity=26, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI221475880, Length=420, Percent_Identity=27.1428571428571, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI281362638, Length=345, Percent_Identity=29.8550724637681, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI281362636, Length=345, Percent_Identity=29.8550724637681, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI161083233, Length=345, Percent_Identity=29.2753623188406, Blast_Score=144, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 46236; Mature: 46236
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLSVAFGALLTACAPDVPQTADTAAAPAAEAEAPTQERSAAEEMHFRTLVLDTHLD CHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC TPAYFHDPSYTFSKKGSFDEDGTHVDLPRMNEGGLDGGFWVIFTPQGPLDEASYLAARNM CCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH AVLRQMSIREFAAKYAGDVELAFSTSDAERIAAAGKKIVFQSMENSYPLGTDISMLDTFY HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VGGLRMIAPVHFRNNQFADSATDVNEVFGGLSPLGEELVREANRLGLILDGSHASDGTVR HCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH DMLEISTTPLILSHSGPKAVYDHPRNVPDDLLIAIAEDGGVIQINAYGSYLEALPASPER HHHHHCCCCEEEECCCCCHHHCCCCCCCCHHEEEEECCCCEEEEECCCHHHHHCCCCHHH LAALAELEAEFGSDTSAMDEATMTAYRAAYETVNTSFPAPRSTFEKFMEHLLYTLELVGP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC EHVGVGADWDGGGGVDGMKDIVDLPKVTAALVEAGYSEEDVANIWGGNVLRLMSEVDAAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH SADLSSPQVLN HCCCCCCCCCC >Mature Secondary Structure MKKLLLSVAFGALLTACAPDVPQTADTAAAPAAEAEAPTQERSAAEEMHFRTLVLDTHLD CHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC TPAYFHDPSYTFSKKGSFDEDGTHVDLPRMNEGGLDGGFWVIFTPQGPLDEASYLAARNM CCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH AVLRQMSIREFAAKYAGDVELAFSTSDAERIAAAGKKIVFQSMENSYPLGTDISMLDTFY HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VGGLRMIAPVHFRNNQFADSATDVNEVFGGLSPLGEELVREANRLGLILDGSHASDGTVR HCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH DMLEISTTPLILSHSGPKAVYDHPRNVPDDLLIAIAEDGGVIQINAYGSYLEALPASPER HHHHHCCCCEEEECCCCCHHHCCCCCCCCHHEEEEECCCCEEEEECCCHHHHHCCCCHHH LAALAELEAEFGSDTSAMDEATMTAYRAAYETVNTSFPAPRSTFEKFMEHLLYTLELVGP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC EHVGVGADWDGGGGVDGMKDIVDLPKVTAALVEAGYSEEDVANIWGGNVLRLMSEVDAAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH SADLSSPQVLN HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]