Click here to switch to the map view.

The map label for this gene is 114799426

Identifier: 114799426

GI number: 114799426

Start: 1340997

End: 1341509

Strand: Direct

Name: 114799426

Synonym: HNE_1308

Alternate gene names: NA

Gene position: 1340997-1341509 (Clockwise)

Preceding gene: 114797185

Following gene: 114797067

Centisome position: 36.19

GC content: 67.84

Gene sequence:

>513_bases
ATGGCCGACCAGCCGATGGAGACGCGGCAGGCGGCGCTGGCGGAAAAGGTGCGGCTGGACCCGCAATCGCTGACCGAAGG
CGAGATGCTGTCGCGCCTGGAGCAGGCGGTGATCGACAAGCCCGATGAGCCCCAGCCGCATTATTTCATCGGCGAGATGC
TGCGCACGCAAGGGCGGGCGGAGGATGCTGTGCGGGCGTATCAGTCTGCGCTGCGGCGGGATCAGGATTTTGTGCCGGCA
CTGATCGGGCTGGCGGATGTGCTGACGCAGCTGGCGGACGGGATGATCGGGCCGGATGCGACGCGGCTCTATGCGCGGGC
CTATCAGCTGGACGAGAGCCAGGTGAGCGCAGGGATGCGCGCGGCCATGGGCGCGGCGCAGGCAGGCGATCAGGAAAAGG
CCGAGCAGGCGATGCGCTATATCTATGCGCGCCTGCCGGAGGATGATCCGCGCCGCGAACGGTTCCGGCCGATGATCGAG
GCGATTGGGCAGGCGCCGGCTGAGCCGGAATAG

Upstream 100 bases:

>100_bases
CTTTGAGATTTCCCCGGCCATGAAACATCTGAACCTCATTATTCTTGGGCTTTGTCTTGTGCTTGGCGCGGGCGGGTATC
TGTTGATCGGCAAGCCGGGC

Downstream 100 bases:

>100_bases
CGCTGTATCTGCCGCACTCCCCAAGGGGGGCGGGGCAGCTTATAACCTGACCCATGCGCGCACGGACCCGACGGCTTTAT
ACTTTTGGCATTGCGGCCGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MADQPMETRQAALAEKVRLDPQSLTEGEMLSRLEQAVIDKPDEPQPHYFIGEMLRTQGRAEDAVRAYQSALRRDQDFVPA
LIGLADVLTQLADGMIGPDATRLYARAYQLDESQVSAGMRAAMGAAQAGDQEKAEQAMRYIYARLPEDDPRRERFRPMIE
AIGQAPAEPE

Sequences:

>Translated_170_residues
MADQPMETRQAALAEKVRLDPQSLTEGEMLSRLEQAVIDKPDEPQPHYFIGEMLRTQGRAEDAVRAYQSALRRDQDFVPA
LIGLADVLTQLADGMIGPDATRLYARAYQLDESQVSAGMRAAMGAAQAGDQEKAEQAMRYIYARLPEDDPRRERFRPMIE
AIGQAPAEPE
>Mature_169_residues
ADQPMETRQAALAEKVRLDPQSLTEGEMLSRLEQAVIDKPDEPQPHYFIGEMLRTQGRAEDAVRAYQSALRRDQDFVPAL
IGLADVLTQLADGMIGPDATRLYARAYQLDESQVSAGMRAAMGAAQAGDQEKAEQAMRYIYARLPEDDPRRERFRPMIEA
IGQAPAEPE

Specific function: Unknown

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18963; Mature: 18831

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQPMETRQAALAEKVRLDPQSLTEGEMLSRLEQAVIDKPDEPQPHYFIGEMLRTQGRA
CCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
EDAVRAYQSALRRDQDFVPALIGLADVLTQLADGMIGPDATRLYARAYQLDESQVSAGMR
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAMGAAQAGDQEKAEQAMRYIYARLPEDDPRRERFRPMIEAIGQAPAEPE
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ADQPMETRQAALAEKVRLDPQSLTEGEMLSRLEQAVIDKPDEPQPHYFIGEMLRTQGRA
CCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
EDAVRAYQSALRRDQDFVPALIGLADVLTQLADGMIGPDATRLYARAYQLDESQVSAGMR
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAMGAAQAGDQEKAEQAMRYIYARLPEDDPRRERFRPMIEAIGQAPAEPE
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA