Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799385

Identifier: 114799385

GI number: 114799385

Start: 1357387

End: 1357791

Strand: Reverse

Name: 114799385

Synonym: HNE_1324

Alternate gene names: NA

Gene position: 1357791-1357387 (Counterclockwise)

Preceding gene: 114800163

Following gene: 114798308

Centisome position: 36.65

GC content: 59.75

Gene sequence:

>405_bases
ATGAGCGCGCTGACCAGCATCGCGCCCAGCGTCGACGAGATGTATCTCACGGCGGAGAAATGTTTCGCTGACCTGCCCGA
GTTCATGCGCAAGGCGGCCGGCGATGTCCGCATCCTCGTGATGGATTATGCCGAGGACGAGACCCTTGACGAGATGCAGA
TCGACGACGCGCTGGAGCTGACCGGACTCTATGTGGGCATCCCCCTCACCCTCGAAAGCGTCACCAACCCCTCCGAATAC
AGACCACTGGTCTATCTCTACCGCCTGCCCATCCTGTTTGAATGGGCCGCGCGGGGCGATGTGACCGTGGAAGAGCTGGT
GACCCATGTGTTCATCCACGAACTCGGCCACCATTTCGGCTGGTCGGACGAAGAAATGGACGCCAAGCTGGAAGAAGATG
ACTGA

Upstream 100 bases:

>100_bases
GCGCCGACGCCATTGTCGGGGTAAAATTCGACTACAGCGTCATCGGCCAGGGTGGCTCGATGATGATGGTGGCCGTTTCC
GGCACTGCCGTGACACTGGC

Downstream 100 bases:

>100_bases
CGCCGGCCTTCGGGCCGGCGCCGTCCTCATCACACCAACAAATCTTCCTGCCGCCGCACCTCGGTTTCCTCATCCTTGGA
GGCCAGCGCAATGCCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSALTSIAPSVDEMYLTAEKCFADLPEFMRKAAGDVRILVMDYAEDETLDEMQIDDALELTGLYVGIPLTLESVTNPSEY
RPLVYLYRLPILFEWAARGDVTVEELVTHVFIHELGHHFGWSDEEMDAKLEEDD

Sequences:

>Translated_134_residues
MSALTSIAPSVDEMYLTAEKCFADLPEFMRKAAGDVRILVMDYAEDETLDEMQIDDALELTGLYVGIPLTLESVTNPSEY
RPLVYLYRLPILFEWAARGDVTVEELVTHVFIHELGHHFGWSDEEMDAKLEEDD
>Mature_133_residues
SALTSIAPSVDEMYLTAEKCFADLPEFMRKAAGDVRILVMDYAEDETLDEMQIDDALELTGLYVGIPLTLESVTNPSEYR
PLVYLYRLPILFEWAARGDVTVEELVTHVFIHELGHHFGWSDEEMDAKLEEDD

Specific function: Unknown

COG id: COG3824

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15275; Mature: 15144

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTSIAPSVDEMYLTAEKCFADLPEFMRKAAGDVRILVMDYAEDETLDEMQIDDALEL
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCHHHH
TGLYVGIPLTLESVTNPSEYRPLVYLYRLPILFEWAARGDVTVEELVTHVFIHELGHHFG
CEEEEECCEEECCCCCCCCCCCCHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
WSDEEMDAKLEEDD
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SALTSIAPSVDEMYLTAEKCFADLPEFMRKAAGDVRILVMDYAEDETLDEMQIDDALEL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCHHHH
TGLYVGIPLTLESVTNPSEYRPLVYLYRLPILFEWAARGDVTVEELVTHVFIHELGHHFG
CEEEEECCEEECCCCCCCCCCCCHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
WSDEEMDAKLEEDD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA