| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is bcr [H]
Identifier: 114799340
GI number: 114799340
Start: 3293840
End: 3295039
Strand: Direct
Name: bcr [H]
Synonym: HNE_3113
Alternate gene names: 114799340
Gene position: 3293840-3295039 (Clockwise)
Preceding gene: 114798153
Following gene: 114797670
Centisome position: 88.9
GC content: 63.08
Gene sequence:
>1200_bases ATGCGTAAAGTCGAATTCGTGGCCATCGTCGCCGGCCTGATGGCGCTCAATGCGATCGCCATCGACATCATGCTGCCCGC GCTCAGCGCCATCGCGCGCGACACCGGCCTCACCGCCGAAGGCGGCGACCAGAACCGCCAGCAGCTGATCATCTTTGCCT ATGTGCTCGGCTTCGGCGCCCCCCAGCTGATCTGGGGACCGATCACCGACCGGTTCGGCCGGCGCGCGCCGCTGTTCATC GGCCTGATCGGCTATGTGCTGACAGCCCTCCTCTGCATCATGGCGCACAGCTTCTGGGCCTTGCTCGCCGCGCGCTTCCT GCAAGGAGTGTTCTCTTCGGGCGCCCGCACAGTCGCCTCCGCCGTGGTGCGCGACCTGTTCGCCGGGCGCAGCATGGCGA GCTTCATGTCGCTGGTGATGACCATCTTCATGATCGTGCCGATCATCGCCCCGACCATCGGCCAGATCATTCTCTATGTG GCGCCCTGGGAAGGCATCTTTGTCGTGCTCGCCGTCTGGGGCGCGCTGATGCTGGGCTGGACCTGGTTCCGCCTGCCCGA AAGCCTGCCGAAGGAGGCCCGCCGGTCTCTGGAGATCGGCAGCGTCATGACAGCGTATCTTCAGGTCATCCGCACGCGGG TGAGCTTTGGTTACATGCTGGCCTCTGGCCTCGTCTTCGGCTCGCTGTTTGCGTTCATCGCCTCGTCCGAACAGGTGTTC CGTGACGTGTTCGATCAGGGCGACACCTTCGCCTACTGGTTTGCCGGCATTGCCGCCGCGTTGGCCGTATCGAACTTTGC CAACTCGCGCCTTGTCGAGAAAGTCGGTATGCGCCGTATCAGCCATATCGCGCTTCTCACCTTCATGCTGTCCTCTCTGG TGCTCACCCTGGCTACGCTGGCCTGGGGCGAAAACCTGGCCGTATTCTTCCCGCTGTTTGCGCTGGGCTTTGCCTGTTTC GGCATGATGGGGTCAAATTTCTCGGCGCTGGCCATGGAGCCACTGGGTAAGATCGCGGGCACGGCGTCCGCCGCGTATGG TTTTGCCACCACCATGATCTCCAGCATCATCGGCATGATCATCGGCTCGCAGTTTAACGGCACGACCGTTCCGCTCACGC TCGGCTTCGTGATCCTCGGCGCCGCTTCGCTGGTGGTGATCCTGGTGACGGAAAAGGGCCGCCTGTTCAGCCGCCATTGA
Upstream 100 bases:
>100_bases GCTTTCATCCTGGCGCTCGCCGGAAACTGGAAAGACCGGACCCATGGACGGAAGTGAAGCGGGCAAGGCCGACGGCCTTC ACGCGCCCCAGCCGACAGGC
Downstream 100 bases:
>100_bases GGGCTGCGTCAGAGCGGCTCCCGATGGCGCGACAGCGGACGCACGACCTTCTCCAGATGCTCGACGATACGGGCGGCAAT GTCCTTGCCGGTCGCCTTCT
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRKVEFVAIVAGLMALNAIAIDIMLPALSAIARDTGLTAEGGDQNRQQLIIFAYVLGFGAPQLIWGPITDRFGRRAPLFI GLIGYVLTALLCIMAHSFWALLAARFLQGVFSSGARTVASAVVRDLFAGRSMASFMSLVMTIFMIVPIIAPTIGQIILYV APWEGIFVVLAVWGALMLGWTWFRLPESLPKEARRSLEIGSVMTAYLQVIRTRVSFGYMLASGLVFGSLFAFIASSEQVF RDVFDQGDTFAYWFAGIAAALAVSNFANSRLVEKVGMRRISHIALLTFMLSSLVLTLATLAWGENLAVFFPLFALGFACF GMMGSNFSALAMEPLGKIAGTASAAYGFATTMISSIIGMIIGSQFNGTTVPLTLGFVILGAASLVVILVTEKGRLFSRH
Sequences:
>Translated_399_residues MRKVEFVAIVAGLMALNAIAIDIMLPALSAIARDTGLTAEGGDQNRQQLIIFAYVLGFGAPQLIWGPITDRFGRRAPLFI GLIGYVLTALLCIMAHSFWALLAARFLQGVFSSGARTVASAVVRDLFAGRSMASFMSLVMTIFMIVPIIAPTIGQIILYV APWEGIFVVLAVWGALMLGWTWFRLPESLPKEARRSLEIGSVMTAYLQVIRTRVSFGYMLASGLVFGSLFAFIASSEQVF RDVFDQGDTFAYWFAGIAAALAVSNFANSRLVEKVGMRRISHIALLTFMLSSLVLTLATLAWGENLAVFFPLFALGFACF GMMGSNFSALAMEPLGKIAGTASAAYGFATTMISSIIGMIIGSQFNGTTVPLTLGFVILGAASLVVILVTEKGRLFSRH >Mature_399_residues MRKVEFVAIVAGLMALNAIAIDIMLPALSAIARDTGLTAEGGDQNRQQLIIFAYVLGFGAPQLIWGPITDRFGRRAPLFI GLIGYVLTALLCIMAHSFWALLAARFLQGVFSSGARTVASAVVRDLFAGRSMASFMSLVMTIFMIVPIIAPTIGQIILYV APWEGIFVVLAVWGALMLGWTWFRLPESLPKEARRSLEIGSVMTAYLQVIRTRVSFGYMLASGLVFGSLFAFIASSEQVF RDVFDQGDTFAYWFAGIAAALAVSNFANSRLVEKVGMRRISHIALLTFMLSSLVLTLATLAWGENLAVFFPLFALGFACF GMMGSNFSALAMEPLGKIAGTASAAYGFATTMISSIIGMIIGSQFNGTTVPLTLGFVILGAASLVVILVTEKGRLFSRH
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=392, Percent_Identity=28.0612244897959, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI48994889, Length=240, Percent_Identity=28.3333333333333, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790146, Length=350, Percent_Identity=26.8571428571429, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787065, Length=316, Percent_Identity=25.6329113924051, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87082312, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790794, Length=257, Percent_Identity=23.3463035019455, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6325414, Length=103, Percent_Identity=31.0679611650485, Blast_Score=63, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42986; Mature: 42986
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVEFVAIVAGLMALNAIAIDIMLPALSAIARDTGLTAEGGDQNRQQLIIFAYVLGFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC PQLIWGPITDRFGRRAPLFIGLIGYVLTALLCIMAHSFWALLAARFLQGVFSSGARTVAS CHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AVVRDLFAGRSMASFMSLVMTIFMIVPIIAPTIGQIILYVAPWEGIFVVLAVWGALMLGW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHH TWFRLPESLPKEARRSLEIGSVMTAYLQVIRTRVSFGYMLASGLVFGSLFAFIASSEQVF HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RDVFDQGDTFAYWFAGIAAALAVSNFANSRLVEKVGMRRISHIALLTFMLSSLVLTLATL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWGENLAVFFPLFALGFACFGMMGSNFSALAMEPLGKIAGTASAAYGFATTMISSIIGMI HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGSQFNGTTVPLTLGFVILGAASLVVILVTEKGRLFSRH HCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCC >Mature Secondary Structure MRKVEFVAIVAGLMALNAIAIDIMLPALSAIARDTGLTAEGGDQNRQQLIIFAYVLGFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC PQLIWGPITDRFGRRAPLFIGLIGYVLTALLCIMAHSFWALLAARFLQGVFSSGARTVAS CHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AVVRDLFAGRSMASFMSLVMTIFMIVPIIAPTIGQIILYVAPWEGIFVVLAVWGALMLGW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHH TWFRLPESLPKEARRSLEIGSVMTAYLQVIRTRVSFGYMLASGLVFGSLFAFIASSEQVF HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RDVFDQGDTFAYWFAGIAAALAVSNFANSRLVEKVGMRRISHIALLTFMLSSLVLTLATL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWGENLAVFFPLFALGFACFGMMGSNFSALAMEPLGKIAGTASAAYGFATTMISSIIGMI HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGSQFNGTTVPLTLGFVILGAASLVVILVTEKGRLFSRH HCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]