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The map label for this gene is cbpA [H]

Identifier: 114799336

GI number: 114799336

Start: 1334705

End: 1335637

Strand: Direct

Name: cbpA [H]

Synonym: HNE_1302

Alternate gene names: 114799336

Gene position: 1334705-1335637 (Clockwise)

Preceding gene: 114799967

Following gene: 114800313

Centisome position: 36.02

GC content: 65.7

Gene sequence:

>933_bases
ATGGCTTTCAATCCCGGCCGGTTCGCCTTACCTGTAAATCCAACAGTTCTCGGCGATCCCGGAAGGAGCCCCAGCTTGGC
GCTCGACCCCTATAACGTCCTCGGCGTGCCCCGCACGGCCACCGAGGCGGAAATCAAGAAAGCCTACCGCGCCAAAGCCA
AGGCGCTGCACCCTGACCTGCACCCGAATGACGAGAAGAAGTCTGACGAGTTCAAGCGGGTGTCGGCGGCGTTTGAAATC
CTCGGTGACGCGGAGAAGAAGGCGAAGTTTGACCGGGGCGAAATCGACGGGGATGGCAATCCGCGCGGCTTTCCCGGTGG
CGGAGGACCCGGCGATGGCTATCGCTGGGATACGCGCGGCGGCGGCGCGGCGCAGGGCGATCCGTTTGAGGATATTCTTT
CCGGCATGTTTGGTGGCGGCGGGCGGCGGCGCAATCCCGGCCCGATGAAGGGGCGCGACGTGCGCTACCGCGTTGAGATC
AGTTTCGAGGATGCCGTGACCGGCGCCCGGCGGCGGATGACGATGGCGGATGGCAGCGCGCTGGACGTGAACATTCCGGC
GGGCATCACAAGCGGGCAAGTGCTGAGGCTGAAAAGCCAGGGGCAGCCTTCGCCGACCAGCGGCCCGCCGGGCGACGCGC
TGCTGGAAGTGGAGGTGGCCGCCAGCCCGATCTGGACGCGTGAGGGCAATCATCTGCGCATGAGCGTGCCGATCGACCTG
AAGAAGGCGGTGCTGGGCGGGAATGTGGATGTGAAGACGCCTTCGGGTACGGTGTCGCTGAAGGTGCCGCCGGGATCGAA
TACGGGCGCGCAGCTGCGCCTGAAGGGCAAAGGCGTGCAGGCGAGCCCGCCGGGCGATCTTTATGTGCGCCTGGAGATCA
TGCTGGCCGACCCCAAGGATGAGGGGTTGCGGCGCTGGGCGGAAAAATCCTGA

Upstream 100 bases:

>100_bases
CTGGCGGGCGGGCGGTAACGGCGCCGGGCGAGGCAGCGTGGCCGGAGGGGGCGCTGGCTGTAAGAGTTGCCGAGATCGGG
ACAGACGGACGCATCGGGGA

Downstream 100 bases:

>100_bases
CGGGTTTTCCCTAAACATCGGCGCTGTTCCGTGATAGGATCATAGACCTTCAGATAAGAGCCTATCCCGCCTGAGGACGG
CCCGGTGAAGGGGACACATT

Product: putative dnaJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MAFNPGRFALPVNPTVLGDPGRSPSLALDPYNVLGVPRTATEAEIKKAYRAKAKALHPDLHPNDEKKSDEFKRVSAAFEI
LGDAEKKAKFDRGEIDGDGNPRGFPGGGGPGDGYRWDTRGGGAAQGDPFEDILSGMFGGGGRRRNPGPMKGRDVRYRVEI
SFEDAVTGARRRMTMADGSALDVNIPAGITSGQVLRLKSQGQPSPTSGPPGDALLEVEVAASPIWTREGNHLRMSVPIDL
KKAVLGGNVDVKTPSGTVSLKVPPGSNTGAQLRLKGKGVQASPPGDLYVRLEIMLADPKDEGLRRWAEKS

Sequences:

>Translated_310_residues
MAFNPGRFALPVNPTVLGDPGRSPSLALDPYNVLGVPRTATEAEIKKAYRAKAKALHPDLHPNDEKKSDEFKRVSAAFEI
LGDAEKKAKFDRGEIDGDGNPRGFPGGGGPGDGYRWDTRGGGAAQGDPFEDILSGMFGGGGRRRNPGPMKGRDVRYRVEI
SFEDAVTGARRRMTMADGSALDVNIPAGITSGQVLRLKSQGQPSPTSGPPGDALLEVEVAASPIWTREGNHLRMSVPIDL
KKAVLGGNVDVKTPSGTVSLKVPPGSNTGAQLRLKGKGVQASPPGDLYVRLEIMLADPKDEGLRRWAEKS
>Mature_309_residues
AFNPGRFALPVNPTVLGDPGRSPSLALDPYNVLGVPRTATEAEIKKAYRAKAKALHPDLHPNDEKKSDEFKRVSAAFEIL
GDAEKKAKFDRGEIDGDGNPRGFPGGGGPGDGYRWDTRGGGAAQGDPFEDILSGMFGGGGRRRNPGPMKGRDVRYRVEIS
FEDAVTGARRRMTMADGSALDVNIPAGITSGQVLRLKSQGQPSPTSGPPGDALLEVEVAASPIWTREGNHLRMSVPIDLK
KAVLGGNVDVKTPSGTVSLKVPPGSNTGAQLRLKGKGVQASPPGDLYVRLEIMLADPKDEGLRRWAEKS

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=321, Percent_Identity=26.1682242990654, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI7706495, Length=283, Percent_Identity=28.9752650176678, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI201862587, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI201862518, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI56549115, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4504511, Length=287, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI39204547, Length=307, Percent_Identity=25.7328990228013, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI5453690, Length=323, Percent_Identity=25.3869969040248, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI205360840, Length=149, Percent_Identity=30.8724832214765, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI205360838, Length=149, Percent_Identity=30.8724832214765, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI88501736, Length=116, Percent_Identity=36.2068965517241, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=47.0588235294118, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI27151736, Length=116, Percent_Identity=36.2068965517241, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787235, Length=291, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1786197, Length=269, Percent_Identity=30.4832713754647, Blast_Score=102, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI212645553, Length=288, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17554644, Length=96, Percent_Identity=40.625, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17534355, Length=322, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI86563276, Length=112, Percent_Identity=38.3928571428571, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=266, Percent_Identity=28.9473684210526, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323813, Length=127, Percent_Identity=40.1574803149606, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322194, Length=96, Percent_Identity=37.5, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920464, Length=328, Percent_Identity=26.5243902439024, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI18858081, Length=328, Percent_Identity=27.7439024390244, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85726398, Length=340, Percent_Identity=27.3529411764706, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24658562, Length=322, Percent_Identity=26.7080745341615, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24658555, Length=322, Percent_Identity=26.7080745341615, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI45552813, Length=356, Percent_Identity=25, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45549272, Length=356, Percent_Identity=25, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45552811, Length=356, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584630, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17648033, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355911, Length=106, Percent_Identity=40.5660377358491, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 32912; Mature: 32780

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNPGRFALPVNPTVLGDPGRSPSLALDPYNVLGVPRTATEAEIKKAYRAKAKALHPDL
CCCCCCCEEEECCCEEECCCCCCCCEEECCHHEECCCCCCHHHHHHHHHHHHHHHCCCCC
HPNDEKKSDEFKRVSAAFEILGDAEKKAKFDRGEIDGDGNPRGFPGGGGPGDGYRWDTRG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GGAAQGDPFEDILSGMFGGGGRRRNPGPMKGRDVRYRVEISFEDAVTGARRRMTMADGSA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCHHHEEEECCCCE
LDVNIPAGITSGQVLRLKSQGQPSPTSGPPGDALLEVEVAASPIWTREGNHLRMSVPIDL
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCH
KKAVLGGNVDVKTPSGTVSLKVPPGSNTGAQLRLKGKGVQASPPGDLYVRLEIMLADPKD
HHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCH
EGLRRWAEKS
HHHHHHHCCC
>Mature Secondary Structure 
AFNPGRFALPVNPTVLGDPGRSPSLALDPYNVLGVPRTATEAEIKKAYRAKAKALHPDL
CCCCCCEEEECCCEEECCCCCCCCEEECCHHEECCCCCCHHHHHHHHHHHHHHHCCCCC
HPNDEKKSDEFKRVSAAFEILGDAEKKAKFDRGEIDGDGNPRGFPGGGGPGDGYRWDTRG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GGAAQGDPFEDILSGMFGGGGRRRNPGPMKGRDVRYRVEISFEDAVTGARRRMTMADGSA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCHHHEEEECCCCE
LDVNIPAGITSGQVLRLKSQGQPSPTSGPPGDALLEVEVAASPIWTREGNHLRMSVPIDL
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCH
KKAVLGGNVDVKTPSGTVSLKVPPGSNTGAQLRLKGKGVQASPPGDLYVRLEIMLADPKD
HHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCH
EGLRRWAEKS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA