| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is hutC [H]
Identifier: 114799323
GI number: 114799323
Start: 2497774
End: 2498496
Strand: Reverse
Name: hutC [H]
Synonym: HNE_2393
Alternate gene names: 114799323
Gene position: 2498496-2497774 (Counterclockwise)
Preceding gene: 114798152
Following gene: 114798335
Centisome position: 67.44
GC content: 67.5
Gene sequence:
>723_bases ATGCGCGACCCTTCCGAACCCCTTTCCGTCAGCGAACGCATCCGCTCCGACATCGAGCGCCAGATCCTTTCCGGGGGGCT GAAGCCGGATGACCGCATCCCGCTGGAGCGGGAGCTGATGGAGATTTACGACTGCTCTCGCATGACGGTGAACAAGGCGG TGAGCGATCTGGCGAGCCGGGGGCTGATCGTGCGCCGGAAACGGGCCGGCTCGTTCGTGGCGCACCCGCCCAGCGATTCC ACCATCCTTGACGTTCCCGACATTCGCCTCGACCTGGAGCGTAAGGGGCATCGCTATGACTACACGCTGCTACGCCGGGC CGTGCGCCGGGCCAAGGGAGAAGGCGAGCAAGCGCTGGCGGGCAAGGGCGGGCGGCTGATTGAGCTGCGCGGCGTGCACC AGGCCGATGGGCAGCCGTTCGGTTTCGAGCGCCGGCTGGTAAACCTCGCGGCGGTGCCCGAGGTTGAAGCGGCCGACTTT GCCGAAACCCCGCCAGGCACCTGGCTTTTGGGGCATGTGCCCTGGTCGCAGGCCGAGCACCGGATCTTTGCGGTGGCGGG CGACCCCGCCATTGCAGCCCATCTCGATATTCCGGAAGGCGCGCCGTGCCTGCTGCTGGAGCGGCGGACATGGCTTAACG GCGTGCCGGTGACGCATGTGTGGCAGACTTTCCCCGGCGACCGGCATTCCTTCATCGGCGAGCTGACCCGGCGGCAGGCC TGA
Upstream 100 bases:
>100_bases CGGTACAAAGCCTGCCTTGAGGCGCTTCTGGCGTGACAAAAGCCGGACAAATCTGGACAAACTTGGACAAATCGAGACAA AGCCGGACAAAACAGGACAC
Downstream 100 bases:
>100_bases GTAGTTTCCCGGATAGGGCGGGTTCTGACGCGAGGACAGGCTTGTATCCGGAAAATCGCGTGGCAGGTTCGTCTGATAAC TGAATATCAGGGGAGTTTGC
Product: putative histidine utilization repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRDPSEPLSVSERIRSDIERQILSGGLKPDDRIPLERELMEIYDCSRMTVNKAVSDLASRGLIVRRKRAGSFVAHPPSDS TILDVPDIRLDLERKGHRYDYTLLRRAVRRAKGEGEQALAGKGGRLIELRGVHQADGQPFGFERRLVNLAAVPEVEAADF AETPPGTWLLGHVPWSQAEHRIFAVAGDPAIAAHLDIPEGAPCLLLERRTWLNGVPVTHVWQTFPGDRHSFIGELTRRQA
Sequences:
>Translated_240_residues MRDPSEPLSVSERIRSDIERQILSGGLKPDDRIPLERELMEIYDCSRMTVNKAVSDLASRGLIVRRKRAGSFVAHPPSDS TILDVPDIRLDLERKGHRYDYTLLRRAVRRAKGEGEQALAGKGGRLIELRGVHQADGQPFGFERRLVNLAAVPEVEAADF AETPPGTWLLGHVPWSQAEHRIFAVAGDPAIAAHLDIPEGAPCLLLERRTWLNGVPVTHVWQTFPGDRHSFIGELTRRQA >Mature_240_residues MRDPSEPLSVSERIRSDIERQILSGGLKPDDRIPLERELMEIYDCSRMTVNKAVSDLASRGLIVRRKRAGSFVAHPPSDS TILDVPDIRLDLERKGHRYDYTLLRRAVRRAKGEGEQALAGKGGRLIELRGVHQADGQPFGFERRLVNLAAVPEVEAADF AETPPGTWLLGHVPWSQAEHRIFAVAGDPAIAAHLDIPEGAPCLLLERRTWLNGVPVTHVWQTFPGDRHSFIGELTRRQA
Specific function: Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer [H]
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010248 - InterPro: IPR000524 - InterPro: IPR011663 - InterPro: IPR011991 [H]
Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]
EC number: NA
Molecular weight: Translated: 26811; Mature: 26811
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDPSEPLSVSERIRSDIERQILSGGLKPDDRIPLERELMEIYDCSRMTVNKAVSDLASR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC GLIVRRKRAGSFVAHPPSDSTILDVPDIRLDLERKGHRYDYTLLRRAVRRAKGEGEQALA CEEEEECCCCCEEECCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHC GKGGRLIELRGVHQADGQPFGFERRLVNLAAVPEVEAADFAETPPGTWLLGHVPWSQAEH CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RIFAVAGDPAIAAHLDIPEGAPCLLLERRTWLNGVPVTHVWQTFPGDRHSFIGELTRRQA EEEEEECCCEEEEEECCCCCCCEEEEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRDPSEPLSVSERIRSDIERQILSGGLKPDDRIPLERELMEIYDCSRMTVNKAVSDLASR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC GLIVRRKRAGSFVAHPPSDSTILDVPDIRLDLERKGHRYDYTLLRRAVRRAKGEGEQALA CEEEEECCCCCEEECCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHC GKGGRLIELRGVHQADGQPFGFERRLVNLAAVPEVEAADFAETPPGTWLLGHVPWSQAEH CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RIFAVAGDPAIAAHLDIPEGAPCLLLERRTWLNGVPVTHVWQTFPGDRHSFIGELTRRQA EEEEEECCCEEEEEECCCCCCCEEEEECCHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]