| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fepA [C]
Identifier: 114799151
GI number: 114799151
Start: 2978650
End: 2980584
Strand: Reverse
Name: fepA [C]
Synonym: HNE_2816
Alternate gene names: 114799151
Gene position: 2980584-2978650 (Counterclockwise)
Preceding gene: 114800517
Following gene: 114798409
Centisome position: 80.45
GC content: 65.79
Gene sequence:
>1935_bases ATGCCCCAACGCCTCGATCCCGTCGAAGTCTACGGCGACCGCCCGCAAGAGGCCCCCGGCTCCCGCGCTATCCTCGATGC GCAGCTGATCGCCGACACCGCCGCCGACCGTCCAGCCGAAATCCTGAACCAGGCCCCCGCCGTCAACATCCAGATGAATT CCGGCCAGGAGCATCTCATCGCCATCCGCTCACCCGTCCTCAGCGGCGGGGCAGGGCAGGGCAGCTTCCTCATCCTCGAG AACGGCGTCCCCATCCGCTCGCCCGCCTTCGGCAACGTCAATTCCCTGATCGAGCCTCACCATGAAGTGGCCGATGCCAT CGAGATCGTCCGCGGTCCCGCCAGCGCCAAATACGGCTCCAACGCAGTCCACGGCCTCCTGAACTTCATCCTGCCGGATG CGGCGAGCCCCCAGAGCCTGCGCCTCAGCTACAGCACGCTGGAACGCCTGCGCGCCGACGCCTCGGTCAATCTCGGTGCC TCAACGCGGCTGAACCTCTCCCTGATGGACGACGCCGGCTGGCGCGACGATACCGAAAGCCAGCAGCAGAAACTCTCCCT CATTACGCAGGCAGACCTCGCCGGATGGGACAGCGCCTTCTGGCTCGCCGCCTCCAGCCTCAACCAGGAAACCGCCAGCT TCATCCAGGGCCCCCGCGCCTATGAAGACGACGCCTTGCGCGAAACAAACCCCAACCCCGAAGCCTACCGCGACGCCTGG TCGGCCCGCCTCGGCGGCCGGCTCTCCCGCGAGGTCGGCCCCGGCACGCTCACCCTCCTGCCAAACCTGCACACCCAGGC GATGATCTTCTCCCAGCATTTCCTGCCCTATGGCGGCGTGGAGAAGAACGGCCATACCGGCGGCGGCGTCCTCGCCCGCT ATGAGTTCACCCCCACCGGCCCCGTCCAGTGGCGCCTCGGCGCCGATACAGACTTCGCGACCGGCTACCTGCGCGAAATC CAGCCCGAACCAAACCCCAGCCCGAACTTCCCGCAAGGCATCCACTACGACTACACCGTCGACACCCAGCTCTTCGCCCT CTGGGCCGAAGCCGATTGGCAGCTCACGGAGGGGCTCCGCCTCCTCGCCGGCCTGCGCGGGGAAACGCATAGCTACGATT ACACCACAGACGCCCCCACCGGCATCAATGGCCGCTTCAACGTGCCTGAAAATCGCACGGACGATTTCACCTTCCTCACG CCCAAGCTCGGCCTCGTCTGGGACCAGCCCTGGGGCGCCCTCTACGCCAACTACGCCCGCGGCGCCCGCGCCCCGCAGGT CTCAGACCTCTACCGCCTCCAGAGCCTCCAGCTTCCCGGCGAAATCGACACCGAAACCCTCGACAGCCTCGAGATCGGCG TGCGCGGTCAGGGCCTCTACGGCCATCTCGACTTTGATGTCGCCGCCTGGTGGATGGACAAGGAAAACTTCTTCTTCCGC GATTCCGATGGCCTCAATGTCCCCGACGGCTCCACCCGCCATTTCGGCATAGACGCGCAGGCGACCTGGGCGTTCACAGA CAATCTCTCCGCCACCGGCAACGTCGCCTGGAGCGAGCAGACCTACACCTTCGACCGCCCCGTCGTCGCTGCCCAGGAAC GCATCGTCGACGGAAACCTGATCGACACCGCCCCCGAATGGCTCGCCGACGCCCGCCTCGACTGGCAGGCAACAGACGCC CTGCGCCTCTCCCTCACCGGCGAACATGTCGGCGAGTATTTCATGGACCCCGCCAACACGGTCACCTATCCCGGCCACAC AGTCTTTGGCGCCCGCGCCGGATACACCTTCGCCGGCGGCATGGAAGCCTACATCCTCATCCGTAACCTGACGGACGAAA AATATGCCGACCGCGCCGATGTCGGCTTCGGCAATGAACGCTATTTCCCCGGAGAACCCGTCAACGCGGTCTTCGGCCTG ACCAAGACATTCTAA
Upstream 100 bases:
>100_bases CAACCGCCGCGCCCTGAAAACAGGGAGCGTAGATTTGCCTTATCGGTCCGGACTGCTTGTCATTGCCGCTGCCATCCTTG CCCCATCGGCGCTGGCAGAA
Downstream 100 bases:
>100_bases GGAGGAAGCAATGAAACTCTACCACAGCCCGATGGCGCCCAATCCGGACCGCGTCGTCTATTTCCTGCGCGCCAAAGGCA AGCTCGACGCCGTCGATCTG
Product: putative TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; NB Dependent Receptor; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Siderophore Receptor Family Protein; NB-Dependent Siderophore Receptor
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MPQRLDPVEVYGDRPQEAPGSRAILDAQLIADTAADRPAEILNQAPAVNIQMNSGQEHLIAIRSPVLSGGAGQGSFLILE NGVPIRSPAFGNVNSLIEPHHEVADAIEIVRGPASAKYGSNAVHGLLNFILPDAASPQSLRLSYSTLERLRADASVNLGA STRLNLSLMDDAGWRDDTESQQQKLSLITQADLAGWDSAFWLAASSLNQETASFIQGPRAYEDDALRETNPNPEAYRDAW SARLGGRLSREVGPGTLTLLPNLHTQAMIFSQHFLPYGGVEKNGHTGGGVLARYEFTPTGPVQWRLGADTDFATGYLREI QPEPNPSPNFPQGIHYDYTVDTQLFALWAEADWQLTEGLRLLAGLRGETHSYDYTTDAPTGINGRFNVPENRTDDFTFLT PKLGLVWDQPWGALYANYARGARAPQVSDLYRLQSLQLPGEIDTETLDSLEIGVRGQGLYGHLDFDVAAWWMDKENFFFR DSDGLNVPDGSTRHFGIDAQATWAFTDNLSATGNVAWSEQTYTFDRPVVAAQERIVDGNLIDTAPEWLADARLDWQATDA LRLSLTGEHVGEYFMDPANTVTYPGHTVFGARAGYTFAGGMEAYILIRNLTDEKYADRADVGFGNERYFPGEPVNAVFGL TKTF
Sequences:
>Translated_644_residues MPQRLDPVEVYGDRPQEAPGSRAILDAQLIADTAADRPAEILNQAPAVNIQMNSGQEHLIAIRSPVLSGGAGQGSFLILE NGVPIRSPAFGNVNSLIEPHHEVADAIEIVRGPASAKYGSNAVHGLLNFILPDAASPQSLRLSYSTLERLRADASVNLGA STRLNLSLMDDAGWRDDTESQQQKLSLITQADLAGWDSAFWLAASSLNQETASFIQGPRAYEDDALRETNPNPEAYRDAW SARLGGRLSREVGPGTLTLLPNLHTQAMIFSQHFLPYGGVEKNGHTGGGVLARYEFTPTGPVQWRLGADTDFATGYLREI QPEPNPSPNFPQGIHYDYTVDTQLFALWAEADWQLTEGLRLLAGLRGETHSYDYTTDAPTGINGRFNVPENRTDDFTFLT PKLGLVWDQPWGALYANYARGARAPQVSDLYRLQSLQLPGEIDTETLDSLEIGVRGQGLYGHLDFDVAAWWMDKENFFFR DSDGLNVPDGSTRHFGIDAQATWAFTDNLSATGNVAWSEQTYTFDRPVVAAQERIVDGNLIDTAPEWLADARLDWQATDA LRLSLTGEHVGEYFMDPANTVTYPGHTVFGARAGYTFAGGMEAYILIRNLTDEKYADRADVGFGNERYFPGEPVNAVFGL TKTF >Mature_643_residues PQRLDPVEVYGDRPQEAPGSRAILDAQLIADTAADRPAEILNQAPAVNIQMNSGQEHLIAIRSPVLSGGAGQGSFLILEN GVPIRSPAFGNVNSLIEPHHEVADAIEIVRGPASAKYGSNAVHGLLNFILPDAASPQSLRLSYSTLERLRADASVNLGAS TRLNLSLMDDAGWRDDTESQQQKLSLITQADLAGWDSAFWLAASSLNQETASFIQGPRAYEDDALRETNPNPEAYRDAWS ARLGGRLSREVGPGTLTLLPNLHTQAMIFSQHFLPYGGVEKNGHTGGGVLARYEFTPTGPVQWRLGADTDFATGYLREIQ PEPNPSPNFPQGIHYDYTVDTQLFALWAEADWQLTEGLRLLAGLRGETHSYDYTTDAPTGINGRFNVPENRTDDFTFLTP KLGLVWDQPWGALYANYARGARAPQVSDLYRLQSLQLPGEIDTETLDSLEIGVRGQGLYGHLDFDVAAWWMDKENFFFRD SDGLNVPDGSTRHFGIDAQATWAFTDNLSATGNVAWSEQTYTFDRPVVAAQERIVDGNLIDTAPEWLADARLDWQATDAL RLSLTGEHVGEYFMDPANTVTYPGHTVFGARAGYTFAGGMEAYILIRNLTDEKYADRADVGFGNERYFPGEPVNAVFGLT KTF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70710; Mature: 70579
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRLDPVEVYGDRPQEAPGSRAILDAQLIADTAADRPAEILNQAPAVNIQMNSGQEHLI CCCCCCCHHCCCCCCCCCCCCCEEEEHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCEEE AIRSPVLSGGAGQGSFLILENGVPIRSPAFGNVNSLIEPHHEVADAIEIVRGPASAKYGS EEECCHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCC NAVHGLLNFILPDAASPQSLRLSYSTLERLRADASVNLGASTRLNLSLMDDAGWRDDTES HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCHH QQQKLSLITQADLAGWDSAFWLAASSLNQETASFIQGPRAYEDDALRETNPNPEAYRDAW HHHHHHHHHHHCCCCCCCHHEEEHHHCCHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHH SARLGGRLSREVGPGTLTLLPNLHTQAMIFSQHFLPYGGVEKNGHTGGGVLARYEFTPTG HHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC PVQWRLGADTDFATGYLREIQPEPNPSPNFPQGIHYDYTVDTQLFALWAEADWQLTEGLR CEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHH LLAGLRGETHSYDYTTDAPTGINGRFNVPENRTDDFTFLTPKLGLVWDQPWGALYANYAR HHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHC GARAPQVSDLYRLQSLQLPGEIDTETLDSLEIGVRGQGLYGHLDFDVAAWWMDKENFFFR CCCCCCHHHHHHHHHCCCCCCCCCHHHCCEEECEECCCEEEEEECEEEEEEECCCCEEEE DSDGLNVPDGSTRHFGIDAQATWAFTDNLSATGNVAWSEQTYTFDRPVVAAQERIVDGNL CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEECCCEEECCCCHHHHHHHHCCCCC IDTAPEWLADARLDWQATDALRLSLTGEHVGEYFMDPANTVTYPGHTVFGARAGYTFAGG CCCCHHHHHHCCCCEECCCEEEEEECHHHHHHHHCCCCCEEECCCCEEEECCCCCEEECC MEAYILIRNLTDEKYADRADVGFGNERYFPGEPVNAVFGLTKTF CEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHHCHHCCC >Mature Secondary Structure PQRLDPVEVYGDRPQEAPGSRAILDAQLIADTAADRPAEILNQAPAVNIQMNSGQEHLI CCCCCCHHCCCCCCCCCCCCCEEEEHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCEEE AIRSPVLSGGAGQGSFLILENGVPIRSPAFGNVNSLIEPHHEVADAIEIVRGPASAKYGS EEECCHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCC NAVHGLLNFILPDAASPQSLRLSYSTLERLRADASVNLGASTRLNLSLMDDAGWRDDTES HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCHH QQQKLSLITQADLAGWDSAFWLAASSLNQETASFIQGPRAYEDDALRETNPNPEAYRDAW HHHHHHHHHHHCCCCCCCHHEEEHHHCCHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHH SARLGGRLSREVGPGTLTLLPNLHTQAMIFSQHFLPYGGVEKNGHTGGGVLARYEFTPTG HHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC PVQWRLGADTDFATGYLREIQPEPNPSPNFPQGIHYDYTVDTQLFALWAEADWQLTEGLR CEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHH LLAGLRGETHSYDYTTDAPTGINGRFNVPENRTDDFTFLTPKLGLVWDQPWGALYANYAR HHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHC GARAPQVSDLYRLQSLQLPGEIDTETLDSLEIGVRGQGLYGHLDFDVAAWWMDKENFFFR CCCCCCHHHHHHHHHCCCCCCCCCHHHCCEEECEECCCEEEEEECEEEEEEECCCCEEEE DSDGLNVPDGSTRHFGIDAQATWAFTDNLSATGNVAWSEQTYTFDRPVVAAQERIVDGNL CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEECCCEEECCCCHHHHHHHHCCCCC IDTAPEWLADARLDWQATDALRLSLTGEHVGEYFMDPANTVTYPGHTVFGARAGYTFAGG CCCCHHHHHHCCCCEECCCEEEEEECHHHHHHHHCCCCCEEECCCCEEEECCCCCEEECC MEAYILIRNLTDEKYADRADVGFGNERYFPGEPVNAVFGLTKTF CEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA