| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799048
Identifier: 114799048
GI number: 114799048
Start: 2662316
End: 2663248
Strand: Direct
Name: 114799048
Synonym: HNE_2521
Alternate gene names: NA
Gene position: 2662316-2663248 (Clockwise)
Preceding gene: 114798074
Following gene: 114800412
Centisome position: 71.86
GC content: 63.02
Gene sequence:
>933_bases ATGAGTGCCATTCCTGTCATCTGGCCGAATGGCGACGCACTGGACCAGATCATCGGGTGGGGGCTGAATCGTCTAACACG GAATGGCCGACGCAAAAGCACTGACACCGTGATGTCCATCACAGAGTTTCTGGCAGCGAGCGCCCGCCCTTCCGCCCACG TCACCGTGTGGCTGTCGCGGCGCGAAGCGTTCGTTCAGACCTTCAATGGGCGGTCGGCCTCAGCGGGCGATCTCCGGAAG ATTGTTGCCAACGAAGCGGGCCGGCTCAGCCCCGCGCGGAATGCCGACATGGTCATGCTCGCCCGCGTGTCCTCGTCTGA CAGGGGCCGGGTGGATCTTGTCCATGTCCGGACCACTGACCTGGATGCCATCGAATCAAAGGCACGCAAGCTCGGGATTG CGTCGGTCAGCCTGAGCCCTGAGGACACACCGGACCTAACCTTTCCCTCACCCGCCACGCTGAGCCAGACACATCGGGAA CGACGGCTCTGGACGATTGCCCTGCTCGCTCTGATCGGCAGTCTGACGCTGGCGCTTGCCGGACTGGGACACGGGTTATC TGAAGCGGCCAAGCTGGCTGAAACACGTGAAGCCGCGCTCAGGTCCGAATTGCTGCAACGCCGGGAGGCTGAGCGGGAAA TCGGGGCGCTTGGCGCTCTGGCTGCCTTGAAGCCGGAGGCGCGCACGCCGCCAGCCCGTCTTGAGATGCTGGCTCGGCTG AATGAACACACGCCCCAGACAGCCTGGTGGACAGGTATGGATATGACGGGCACGGAGATCCGCCTGACCGGTCTCAGTGA CAACGCCGCCGCGGTTCTGACCGCGCTGACCTCCGCGTTCCCCGATCAAACCGTCCGGTTCGAAGAAACAGTCGCGGATA CGCCCGAGGGCAAGCAGAAATTTGTCATTCTCATTACGGAGCCCGGCTCATGA
Upstream 100 bases:
>100_bases CGGTTCTCAAGATCGATGACGGCCCGCCCCTTGAGCTGACAGCACCTCGCATCGACCGGGGCGCATCCTGCGTGTTTGAT CTGATCGGGAGACGCTGCCG
Downstream 100 bases:
>100_bases TCGGCAGGCTTCAGCCTCTGTTCGGCCGCGTTGGGGGATGGCTGGTACTTGCGGGTCTCGTAGCCACCGTCTGGCTCCTT CTCTCTCCGCGTGTGTCACA
Product: pilN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSAIPVIWPNGDALDQIIGWGLNRLTRNGRRKSTDTVMSITEFLAASARPSAHVTVWLSRREAFVQTFNGRSASAGDLRK IVANEAGRLSPARNADMVMLARVSSSDRGRVDLVHVRTTDLDAIESKARKLGIASVSLSPEDTPDLTFPSPATLSQTHRE RRLWTIALLALIGSLTLALAGLGHGLSEAAKLAETREAALRSELLQRREAEREIGALGALAALKPEARTPPARLEMLARL NEHTPQTAWWTGMDMTGTEIRLTGLSDNAAAVLTALTSAFPDQTVRFEETVADTPEGKQKFVILITEPGS
Sequences:
>Translated_310_residues MSAIPVIWPNGDALDQIIGWGLNRLTRNGRRKSTDTVMSITEFLAASARPSAHVTVWLSRREAFVQTFNGRSASAGDLRK IVANEAGRLSPARNADMVMLARVSSSDRGRVDLVHVRTTDLDAIESKARKLGIASVSLSPEDTPDLTFPSPATLSQTHRE RRLWTIALLALIGSLTLALAGLGHGLSEAAKLAETREAALRSELLQRREAEREIGALGALAALKPEARTPPARLEMLARL NEHTPQTAWWTGMDMTGTEIRLTGLSDNAAAVLTALTSAFPDQTVRFEETVADTPEGKQKFVILITEPGS >Mature_309_residues SAIPVIWPNGDALDQIIGWGLNRLTRNGRRKSTDTVMSITEFLAASARPSAHVTVWLSRREAFVQTFNGRSASAGDLRKI VANEAGRLSPARNADMVMLARVSSSDRGRVDLVHVRTTDLDAIESKARKLGIASVSLSPEDTPDLTFPSPATLSQTHRER RLWTIALLALIGSLTLALAGLGHGLSEAAKLAETREAALRSELLQRREAEREIGALGALAALKPEARTPPARLEMLARLN EHTPQTAWWTGMDMTGTEIRLTGLSDNAAAVLTALTSAFPDQTVRFEETVADTPEGKQKFVILITEPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33547; Mature: 33415
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPVIWPNGDALDQIIGWGLNRLTRNGRRKSTDTVMSITEFLAASARPSAHVTVWLSR CCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEH REAFVQTFNGRSASAGDLRKIVANEAGRLSPARNADMVMLARVSSSDRGRVDLVHVRTTD HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC LDAIESKARKLGIASVSLSPEDTPDLTFPSPATLSQTHRERRLWTIALLALIGSLTLALA HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGHGLSEAAKLAETREAALRSELLQRREAEREIGALGALAALKPEARTPPARLEMLARL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NEHTPQTAWWTGMDMTGTEIRLTGLSDNAAAVLTALTSAFPDQTVRFEETVADTPEGKQK HCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCE FVILITEPGS EEEEEECCCC >Mature Secondary Structure SAIPVIWPNGDALDQIIGWGLNRLTRNGRRKSTDTVMSITEFLAASARPSAHVTVWLSR CCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEH REAFVQTFNGRSASAGDLRKIVANEAGRLSPARNADMVMLARVSSSDRGRVDLVHVRTTD HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC LDAIESKARKLGIASVSLSPEDTPDLTFPSPATLSQTHRERRLWTIALLALIGSLTLALA HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGHGLSEAAKLAETREAALRSELLQRREAEREIGALGALAALKPEARTPPARLEMLARL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NEHTPQTAWWTGMDMTGTEIRLTGLSDNAAAVLTALTSAFPDQTVRFEETVADTPEGKQK HCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCE FVILITEPGS EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA